Alep008455.1
Basic Information
- Insect
- Athetis lepigone
- Gene Symbol
- -
- Assembly
- GCA_033675125.1
- Location
- CM066221.1:1325344-1327244[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-09 6.1e-06 27.0 0.0 3 43 16 57 14 59 0.88 2 2 5 8.5e+03 -2.3 0.0 17 28 357 368 353 368 0.82
Sequence Information
- Coding Sequence
- atggtccgcaattacaaaataaaaaaagagaagCCTTATTCTAAAGAAGAACTTTTTGATGCgattgaaaaagtaaaaaaaaagcaattgaGTAGCTACGAGGCTGCTGAAAAGTTTGGAATTCCGAGATCTACAATAATTTCGCACATCTATCAAACTCGTGGTCAAAAACAACTGAATGCAGGAGAAAACATAACCATTTTGAAGTTGCCACCGCATACATCACATATTCTACAACCACTTGATTGTAGTGCTATGAAACCGATGAAAGATCGATGGGAAGATGCTTTGGTAAAGTGGCAGAGACTTAACGTTGGAGCCAAATTACCAAAAAATGAATTTTCACGAATCCTGACTGAAATTTGGGACAATCTTAATCCAGTTATACTGGCCAATGGATTTAGAAAAACAGGTATATATCCGGTCAATCGACAAGTGCTACCGAAAGAAAAGTTTGATCCTATAACTTGGTTAAAATGGGAACAATACGTTCATGAACGAGAACAGTCCAACTACGTTGAATATCAAAATATTAACGATTCAATTGAAAAATCATATGAACATAATACACAAGATTTATCTAACGAACAATTAAGTATTACAGCACCAGCGCTCTTGGCATTAGTACTTACGGTTTTGAATAATCAAAATTTACAGAAAGGAGACCACGAAATACTAGAAATTAATTCAAAACGCACAATTGAAGAAGATCAAACAAATCCAGCAATAGGAAAAGAACTGAATTGCAGAGACACGCAAGAGAATAAtggaaagaaaataaatacattaaataaaataaaattaaaagaagaaggCACTAAAGAACTTAGAATTTACGAAGAAGAGAAGGAATTGCACAATGAAACAAAGAAACTGAAAATGTCTCAAAGAAGAAAAGTGACAAACAAATACAGAAAACTATCAAAAatttctaataatataatagtaaaaaGCAAAGAGCAAAAATATAACCAAATACAAAAACAAGACctgaaaaaatctttaaaagatTTGATTGACAAAGACGACCCAACATCCAACCCTGAAACCGAACAACGAAAAGATTCAATTACTTTTGAGAAAACGGCAAAAAAATTTgacgtaaaaaaaattgaactaaCATCTAAACTCCCCCGACCAAGTGGTTCAGTTAGTTATTCGAAGTTGTATTACTtcgaataa
- Protein Sequence
- MVRNYKIKKEKPYSKEELFDAIEKVKKKQLSSYEAAEKFGIPRSTIISHIYQTRGQKQLNAGENITILKLPPHTSHILQPLDCSAMKPMKDRWEDALVKWQRLNVGAKLPKNEFSRILTEIWDNLNPVILANGFRKTGIYPVNRQVLPKEKFDPITWLKWEQYVHEREQSNYVEYQNINDSIEKSYEHNTQDLSNEQLSITAPALLALVLTVLNNQNLQKGDHEILEINSKRTIEEDQTNPAIGKELNCRDTQENNGKKINTLNKIKLKEEGTKELRIYEEEKELHNETKKLKMSQRRKVTNKYRKLSKISNNIIVKSKEQKYNQIQKQDLKKSLKDLIDKDDPTSNPETEQRKDSITFEKTAKKFDVKKIELTSKLPRPSGSVSYSKLYYFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -