Alep008743.1
Basic Information
- Insect
- Athetis lepigone
- Gene Symbol
- -
- Assembly
- GCA_033675125.1
- Location
- CM066221.1:2856346-2861918[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-10 8.7e-07 29.7 0.1 1 43 16 58 16 60 0.88 2 2 9 1.5e+04 -3.1 0.0 15 21 107 113 103 115 0.84
Sequence Information
- Coding Sequence
- ATGGTACGAAATTATGTTCGGAAGACGGATAGGGCAGCTAAATATACAAGAGAACAATTGCTGCAAGCTGTAGAGAAAGTCGAGAACGGCGAGTTAACAGCTTATAGAGCCGCTAAAGCATACAAAATTCCTCGGCCAACCATTGTAGCCCGAGTGTATGACAAATATGGATTAAAATCGAAATCTTTAGGGAGAACTGTTGTCGTCACTGTATGTGAAGATACAACGAGGAGAGGAGAAGCGCTTCGTCAACACCAAGGAGAGGATGAGGGAAATACCACCGACGAGGAGGAGAGCGTCGCCGAGCGCGGCCACGATGGCTCGATGTCGACAGCACAACCAGCTCCTCAGGTCCAGGTCAGTCCAGACTTCCTATCCACGCTGATTGAGACGATCACGCGTGCGCAAGTGGAAGCCAACAGAAGTCTCATCAACTCGCTGATGACATCGAGCGGCGAATGCAGGGCCTTCACCCCTATTGGGGCCTCTCCAACCACCAACGCGACCGGCGGAAGTACCGCTGCGGCAAACGCGTTGTGCAAAGACGCGAACTTCACGAAATGTACCGCGAAATTCGACGGGTCATCTCAAGACGCCGAGGTCCTGGAAGCGTTCCTAGACGCCGTCGAGGTATTCAAAGAGTGTGCAGCAAGCAGTAAGCAACGAGCACGCCCTACGTGGGTTACCGATGCTGCTGGAGGGCGAAGCCGCCGTGTGGTGGCGCGGCGTCAAGGCGTCGGCGGCCACGTGGCCGGACGCGAACGCGCGCCTCCGCGCGACGTACGGGGCGTAGCGCAGCCCGCGCACCTTACTCTACGGCAGATGTACTCCAGAGAACAAGAAGACGACGAACGCGCGGAATCGTTTTTGTGTAGAGTGCGCGCATTAATGGCGAAGTTGCCGTATACACTCGCCGAACCGGTGCAAGTAGACATTTGTTACGGATTATTGCACCGACGCGTAGTGAAAAGAGTGCCGCGGACAGTGTTCGTAGTTTAG
- Protein Sequence
- MVRNYVRKTDRAAKYTREQLLQAVEKVENGELTAYRAAKAYKIPRPTIVARVYDKYGLKSKSLGRTVVVTVCEDTTRRGEALRQHQGEDEGNTTDEEESVAERGHDGSMSTAQPAPQVQVSPDFLSTLIETITRAQVEANRSLINSLMTSSGECRAFTPIGASPTTNATGGSTAAANALCKDANFTKCTAKFDGSSQDAEVLEAFLDAVEVFKECAASSKQRARPTWVTDAAGGRSRRVVARRQGVGGHVAGRERAPPRDVRGVAQPAHLTLRQMYSREQEDDERAESFLCRVRALMAKLPYTLAEPVQVDICYGLLHRRVVKRVPRTVFVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -