Aibi020859.1
Basic Information
- Insect
- Atherix ibis
- Gene Symbol
- stc
- Assembly
- GCA_958298945.2
- Location
- OY282609.1:13502202-13505666[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 3 2.8e+04 -4.1 1.6 15 19 394 398 393 398 0.81 2 14 0.085 8e+02 0.8 0.2 4 10 427 433 426 435 0.95 3 14 0.00046 4.3 8.1 17.2 4 19 441 456 438 456 0.93 4 14 2.5e-06 0.024 15.3 9.0 3 18 494 509 492 510 0.91 5 14 3 2.8e+04 -6.8 4.1 9 13 516 520 515 521 0.58 6 14 4.9e-06 0.046 14.4 17.5 1 19 550 568 550 568 0.95 7 14 1.4e-05 0.13 12.9 12.0 4 18 616 630 609 631 0.86 8 14 0.064 6e+02 1.2 12.1 1 11 671 681 671 693 0.91 9 14 1.9e-09 1.8e-05 25.3 13.6 1 18 698 715 698 716 0.97 10 14 2.3 2.1e+04 -3.7 0.6 6 10 745 749 744 750 0.72 11 14 3 2.8e+04 -10.7 13.1 10 18 763 772 752 773 0.68 12 14 9.3e-06 0.087 13.5 13.3 1 16 809 824 809 834 0.82 13 14 1.1e-07 0.001 19.7 11.8 1 19 841 860 841 860 0.97 14 14 0.73 6.8e+03 -2.2 0.5 7 12 875 880 869 880 0.71
Sequence Information
- Coding Sequence
- ATGTCGGGATTTCCAACATCCAATCAGAGTGATTATGATGAGAACGGGTACATTAATTTCAATCAGTTTTTACTGCAGCATAATTTAGATCGTCCAGTCAGCCAAAATAATTTCGGACAAACGGTGGATCCAATTAGCACCGCACCGCTTAATCCAGCAATTAGTAATGATTTATACAATTACACAAATATAGATCCATTAGACTTTGGAGCATATAATTATGcaaatttcaatgaattttccaaTACTAATCAAGCTATTGGTCAACTTTATAACGATGAAAATAATATAGGATTGAATTTGGATCCGTTCCAGCAAAATAACTATCAGGCCTATTCAGAGCCAACTTTGGTTTCATCTGTCACATATTCCAATGATTTAGTGGCAAGTTCAACTTTATTGCCCACTGCCGAGGAATTTATTCCTAGGTTTAACAATATTACCTTGAATAACACAACAAATGAACCACCAGATGGGCTTTTCTCACAACAAATGAACGGAATCGTCTCTAAAAATAATCCGTTTCTATTCACTAATGACACATTCAATGGAAATTCTGCCACAATCAATAATCAAGAGAACAATTTACAGGATGACGGACTCCTACGAAATGGCAATAGCTTATCATCTTTAAATACGGGAGCAATTAGAAAGTCTAACAGCCATACTCAGGCTCGGAGTCGTAATTCCGACCAAAGACATCACAGCGATGGACAATATCAAGTCTATGGTAATTATTATCGTTCTAACGGTTATTATAATCATAAGAACAAGTCGCAGTTCGATAATAATCGAAATTCGAGGCGAAAAGATGCCCGAAAGGAAAACAAAGACTATGATTATCGAAATATTCAGGATGTTCTAGACGATGATGACTTCTCTGAATCACCACACTCCATCAATGACAACTCCAGCAATAAAGCTGCATCTCCGAAAAATGGAGGACGAGATTTAAATGATCAATTCTCTCTGAAAGTTTTTGATCCTACAGTAGAGCCGGTTACTCAACGGgagaaattaattcaagaaatcgAGGAACGTAAATTGGAATGTCTTGTATGTGTCGACAGCATTAAGACTCATCATTCGATATGGTCGTGCAGCAGTTGTTTTCACATATTTCATTTGTCCTGCATAACTAAGTGGGCAAATAGTTCCACATCAGAAACAGGATGGCGATGCCCAGCGTGCCAAAACACTTTGAAACAAGTTCCGCGTGATTATTATTGTTTCTGCGGGAAAACAAGAAATCCACAATATAATCGCAATGACGTGGCTCATTCGTGTGGTGAAGTTTGTGGTCGAAAAACATCCTGCGATCACCCTTGCACATTATTATGCCATCCAGGACCATGTCCACATTGTCAAGCTACACTAACTAGAGAATGTGGTTGCGGAAAGTCGAGTCGAATTGTGCAGTGTTATCTCAAAGAAGAGTTTTCGTGTGGTGAAGTCTGTGATCTTTTCCGTAACTGCAGACTGCATAAATGCGATAGCGTTTGCCACGATGGAAAATGTGCTGATTGTGAACTCATAGTGGATCATAAGTGTCACTGCGGAAAAGTCGATCGGCAGGTGCCTTGTACAAAAGAGTCCAACGAGAAGAAATCATTTTCATGTGGCAAGACCTGCAATCGCCCACTATCATGTTGTAAGCATAAGTGTAAGGATTCGTGTCACTCTGGAGATTGTCGACCATGCAAGCTTTCACCCGAAGTTGTTACATCGTGTCCTTGTGGAAAAATGCCAATACCGTCAGGGAAAAGAACCACATGTGCTGATCCCGTGCCACTTTGCCAAGGAATTTGCAGCAAAACTTTGAAATGTGGTCAACCAGCCTCGCCCCACCAGTGCATTAGTAAATGTCATGTCGGGCAATGTGCTCcgtgcaacaaacaaacagctgTAAAGTGCCGATGTGGTCACATGGATCAGATGATCAAATGTAAGCAACTATCGACAAGAGCGGATGATGCTCGGTGTAAAAAACGGTGCACCAAAAAACGTAATTGCGGCAAGCACAAGTGTAATCAGGAATGCTGCATTGACATCGACCACATATGTCCACTGCCgtgtaattataatttaacttGTGGCAAGCACAAATGCGACCAACCGTGCCACAGGGGCAATTGTGCTCCATGCTACCGCAGTTCATTCGAAGAGCTGTATTGCGAATGTGGCGCGAACGTAATCTATCCACCAGTTCCGTGTGGTACTAAACGGCCAGCATGCGATAAACCTTGCACACGCCAACATTCTTGCGATCATCCCGTGAAGCACAATTGTCACTCTGCACCCACCTGCCCGCCTTGTATAATGTTCACGACTAAGTATTGCTTTGGTGGGCATGAAATGCGCAAAACTATTCCATGTAATCAGGAGAGCTTCTCATGTGGTATGCCCTGTAACAAAGATTTGAACTGTAAGCGTCATAAATGCATTAAACCATGTCATTCTGGCCCATGTCAAATTGAGGGCGACGTATGCAAGCAGAGTTGTGTTGCGGCGAGATCAGCATGTGGACATAAATGTAATGCATCCTGTCATGACGGAGACTGTCCCGATATTCCTTGTAAAGAGGTGTTTGATATCTCTTGCGATTGCGGTAATCGTAAACAGACTCGCACATGTCATGACTTCTCTAGTGAATATCGTCGAATTGCAACTGCTAAGTTAGCATCATCTATGCAAGAAATGCAGCGCGGCAACTGCATTGAATTGACCGACATCTTAGGtccaataaaattatcaaacaatAAAACACTTGAATGTAACGAAGATTGTAAGCTGTTATGGCGGAATCGACAAGTATCTATTGGTCTTCAGATTCGAAATCCTGATCTATCATCAAAATTGCAGACACGTTACTCTGACTTTATTCGAGGTTGGGCCAAAAAAGATCCACAACTGGTTAGAATGATTCACGACAAACTGACGGAGCTTGTCAAGTTATCTAAGGAGAGCAAGCAACGCTCACGTAGTCACTCGTTTCCAACTATGAATCGTGAAAAGCGCCAGCTTGTCCATGAAATGTGTGGCATGTTTGGAGTTGAATCTGTTGCCTACGATGCTGAACCAAATCGAAATGTGGTTGCAACAGCATGTCGAGACAAATCATGGTTACCAGCAGTCGGCATTATGGAAGTGATGGCTCGAGAGAGTGGTCAACGACGTGTACCCGTACCCACCAATAATGcttggaaaatgaaaaaatga
- Protein Sequence
- MSGFPTSNQSDYDENGYINFNQFLLQHNLDRPVSQNNFGQTVDPISTAPLNPAISNDLYNYTNIDPLDFGAYNYANFNEFSNTNQAIGQLYNDENNIGLNLDPFQQNNYQAYSEPTLVSSVTYSNDLVASSTLLPTAEEFIPRFNNITLNNTTNEPPDGLFSQQMNGIVSKNNPFLFTNDTFNGNSATINNQENNLQDDGLLRNGNSLSSLNTGAIRKSNSHTQARSRNSDQRHHSDGQYQVYGNYYRSNGYYNHKNKSQFDNNRNSRRKDARKENKDYDYRNIQDVLDDDDFSESPHSINDNSSNKAASPKNGGRDLNDQFSLKVFDPTVEPVTQREKLIQEIEERKLECLVCVDSIKTHHSIWSCSSCFHIFHLSCITKWANSSTSETGWRCPACQNTLKQVPRDYYCFCGKTRNPQYNRNDVAHSCGEVCGRKTSCDHPCTLLCHPGPCPHCQATLTRECGCGKSSRIVQCYLKEEFSCGEVCDLFRNCRLHKCDSVCHDGKCADCELIVDHKCHCGKVDRQVPCTKESNEKKSFSCGKTCNRPLSCCKHKCKDSCHSGDCRPCKLSPEVVTSCPCGKMPIPSGKRTTCADPVPLCQGICSKTLKCGQPASPHQCISKCHVGQCAPCNKQTAVKCRCGHMDQMIKCKQLSTRADDARCKKRCTKKRNCGKHKCNQECCIDIDHICPLPCNYNLTCGKHKCDQPCHRGNCAPCYRSSFEELYCECGANVIYPPVPCGTKRPACDKPCTRQHSCDHPVKHNCHSAPTCPPCIMFTTKYCFGGHEMRKTIPCNQESFSCGMPCNKDLNCKRHKCIKPCHSGPCQIEGDVCKQSCVAARSACGHKCNASCHDGDCPDIPCKEVFDISCDCGNRKQTRTCHDFSSEYRRIATAKLASSMQEMQRGNCIELTDILGPIKLSNNKTLECNEDCKLLWRNRQVSIGLQIRNPDLSSKLQTRYSDFIRGWAKKDPQLVRMIHDKLTELVKLSKESKQRSRSHSFPTMNREKRQLVHEMCGMFGVESVAYDAEPNRNVVATACRDKSWLPAVGIMEVMARESGQRRVPVPTNNAWKMKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -