Aibi011485.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Atherix ibis
Gene Symbol
nfxl1
Assembly
GCA_958298945.2
Location
OY282606.1:108867366-108870862[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 3 2.8e+04 -7.9 5.6 15 19 198 202 197 202 0.81
2 20 0.2 1.9e+03 -0.4 0.4 4 10 233 239 232 239 0.95
3 20 4.9e-07 0.0046 17.6 15.6 1 19 247 264 247 264 0.99
4 20 4.8e-06 0.045 14.4 15.6 1 18 300 318 300 319 0.96
5 20 3 2.8e+04 -4.7 2.1 6 10 344 348 343 348 0.86
6 20 2.5e-10 2.4e-06 28.1 13.6 1 19 354 372 354 372 0.99
7 20 2 1.9e+04 -3.6 0.4 1 8 397 403 397 404 0.59
8 20 1.4e-08 0.00013 22.5 11.3 1 18 407 424 407 425 0.97
9 20 3 2.8e+04 -5.0 2.3 5 10 448 453 448 453 0.91
10 20 9.6e-05 0.89 10.3 15.2 3 18 461 476 459 477 0.91
11 20 6.5e-08 0.00061 20.4 12.6 3 18 488 503 480 504 0.85
12 20 1.1 1e+04 -2.7 0.9 5 10 532 537 532 537 0.87
13 20 3 2.8e+04 -4.9 10.9 10 18 551 559 541 560 0.92
14 20 0.035 3.3e+02 2.0 6.0 4 12 574 582 572 582 0.89
15 20 2.7 2.5e+04 -4.0 1.1 6 10 639 643 638 643 0.85
16 20 0.00083 7.8 7.3 4.7 1 11 649 659 649 660 0.96
17 20 2.9 2.7e+04 -4.1 1.9 15 18 673 676 673 677 0.87
18 20 0.0053 50 4.7 17.3 4 18 690 704 688 705 0.93
19 20 8.4e-07 0.0079 16.8 10.6 1 16 755 769 755 775 0.90
20 20 2.2 2.1e+04 -3.7 1.0 6 10 805 809 804 809 0.89

Sequence Information

Coding Sequence
atgtCTAAAAGCAATAACCAGAAATCAGGAAACAGATGGAGTTCAATTGTTGCTGATGGAAACCCGTGGGGGGCTGTTTCTACTTCAACAATAGaaaaatccaaagaaaaaagagaaaagttaaataaaaataaaagtcataaGAAAGTTGATTTATcagtacaaaaacaaaataacacgatgagaaaatttgaagaagCGCAAAACCGACATTTAGAAAAAGCCAAAGAACTTATTAAAGACTTTGAATCTAGTtctgaagaagaagacgaaataAATGGACAAGATCTGCTAAGCAATGTTTTCAAAAGTTACGTGGGTGACAGAAATCAACTAGAAAAAACTCAGGCattcttggaaaatatttttcagtcagAATCAGCTGTTTGTCTTATATGCATTGGATCAGTGAAAAGAAATGATGCGatttggtcatgtggaaattgtttttgtttctttcaCCTCAATTGCATTAAAAGATGGGCAAAtgatagtatttttcaacaaaaatcacATTTGGACCAAGAACAAGGCTACTATAACCATCAAGGCGAAtatattcctaaaaaaattaaaccaattaAATGGTGCTGCCCTAAATGTAGATCTGATTATGATCCTCAGAATATTCCGGTCtcatatatttgtttttgtggaaaagaagaaaatccttCTTATGAACCTTGGATTCTACCACATTCATGCGGAGAGATATGTAATAAAGCTCTTAAACCAGATTGTGGTCATTTATGCTTGCTATTATGTCATCCAGgTCCGTGTCCGCCATGTCCGCAAAATATTACAACATCATGTAAATGTATGAAATCTGGTATAAAAACTATACGTTGTTTTCAAAAATCATGGTCGTGCAGTGcaaagTGTTCTGAAATATTACGGTGTGGAATACACTCATGCGAAAATAATTGCCACGAACATGGAAAATGTCCACCATGTATGAAGAAAAGCATTCAGAAATGTGTATGTGGGAGTGAATCGGCTGAAAGGAATTGTTTTGAACTTATTTGGCAATGCAAAAAAacTTGTAAAAAAATGCTTTCTTGCGGCATACATACGTGCCAAAAAATATGCCATTCGGGTGATTGCGGTGAATGTCCTAGAGGTTTACCTAGAAGTTGTCCTTGTGGAAAAACTAAATATATTGCGCCATGTAGTGAAATTATTGAACCTTGTGGAGATacttgccaaaaattattggcctGTGGACTACACTATTGTACTCAAAGATGTCACAAAGGAGAATGCAGTCCGTGCCTTGAAATTGTGCAAAAACAATGTCGTTGTACTTTGCATACAAAGGAACTACCATGCTGCAAGTCATTTACGTGTGAAACAAAGTGCAAATACATGAAAGAATGCAAAAAACATGTTTGCAacaagaaatgttGCGATGGTAATTGCCCTCCATGCGATAAGGTTTGTGGAAAATTGTTATCTTGTAAAAAGCACAAATGTAAGTCAATTTGCCACGATGGACCATGCTACCCATGCGATTTGAGATCGCAAGTGAAATGTCGTTGTGGTTTTACATCAATTACAGTGCCTTGCGGAAGAGAGCGGAAAACGAATCCTCCAAAATGCATGCAACCGTGCAAAATTGCTTCTAAATGTCATCATCAAAATCCTCATCATTGTCATATGAATGAGTGTCCACCgtgttttaaaaaatgtttggaaaaaaataatacaaccaATTGCGTTCATCCATGTCAAGCAAAATGCCATGATGCTGTAAAAGTGGTAATTGCAGAAAAAACAGATATATGGGATTATCAACCAGAAACCattgaGTATAAAAAGATACCTCATCCAAAATGTGAAATTGAAGTTCCGGTAACATGTATTGGTGGACATGAGACAATAATGTGGCCTTGTTACAATTCCAATCCAACGTCCTGTCAACGACGGTGTAATAGACGTTTAAAGTGTACTAATCATAGCTGTGAGTTAGTTTGCCACATTGTTCCAGATACTAATTCTACTGAAcagcaggaaggttgcaaGCCTTGTGAGGAAGGGTGTAAAGTACCAAGAGCACTTGAATGCTTGCACCCTTGTCAAGCACCGTGTCATCCGCCGCCATGTAGACCGTGTAATGTAACAGTAAAATGTAATTGTCACTGTGGCCTTACACAAGTTTACTACAAATGCACCGAATATAACAACGATCAAGGAAAGGACAATTTGATAACTATTAGAGAAAAGTTGAAAAGCTGCGGTAACCGATGCGTCaaagaatatcCTTGTGGTCATCGGTGCACTGCAATTTGTCATTCAGGCAAATGTCCAAATCCtgaaatttgcagaaaaaaagtCAAAGTATATTGTATGTGCAAAAATCTAAAAGTTGAAATCTCCTGCGATAAGTACAGAGCCGGGAATATTTCCATACAATGCAATGAAATCTGTAAACAAAAGCAGGAATTAGAAGATCGTCTAAATCGTGAAAAAGAAGAACGGGAAAAGAAAGCCGAAGAACAACGTAATCTACTTGAATTAGAACAATTCGAGAAgaagttttccaaaaagaagTCTCGTGAACGAAAACATCAAGAAATTATCgataattccaataaaaatcgCAACCTTTGGATTAcgtttattacatttttaagtGTACTAGGCGTTTGCTCTGCAATATACGCTACTTATTATTAA
Protein Sequence
MSKSNNQKSGNRWSSIVADGNPWGAVSTSTIEKSKEKREKLNKNKSHKKVDLSVQKQNNTMRKFEEAQNRHLEKAKELIKDFESSSEEEDEINGQDLLSNVFKSYVGDRNQLEKTQAFLENIFQSESAVCLICIGSVKRNDAIWSCGNCFCFFHLNCIKRWANDSIFQQKSHLDQEQGYYNHQGEYIPKKIKPIKWCCPKCRSDYDPQNIPVSYICFCGKEENPSYEPWILPHSCGEICNKALKPDCGHLCLLLCHPGPCPPCPQNITTSCKCMKSGIKTIRCFQKSWSCSAKCSEILRCGIHSCENNCHEHGKCPPCMKKSIQKCVCGSESAERNCFELIWQCKKTCKKMLSCGIHTCQKICHSGDCGECPRGLPRSCPCGKTKYIAPCSEIIEPCGDTCQKLLACGLHYCTQRCHKGECSPCLEIVQKQCRCTLHTKELPCCKSFTCETKCKYMKECKKHVCNKKCCDGNCPPCDKVCGKLLSCKKHKCKSICHDGPCYPCDLRSQVKCRCGFTSITVPCGRERKTNPPKCMQPCKIASKCHHQNPHHCHMNECPPCFKKCLEKNNTTNCVHPCQAKCHDAVKVVIAEKTDIWDYQPETIEYKKIPHPKCEIEVPVTCIGGHETIMWPCYNSNPTSCQRRCNRRLKCTNHSCELVCHIVPDTNSTEQQEGCKPCEEGCKVPRALECLHPCQAPCHPPPCRPCNVTVKCNCHCGLTQVYYKCTEYNNDQGKDNLITIREKLKSCGNRCVKEYPCGHRCTAICHSGKCPNPEICRKKVKVYCMCKNLKVEISCDKYRAGNISIQCNEICKQKQELEDRLNREKEEREKKAEEQRNLLELEQFEKKFSKKKSRERKHQEIIDNSNKNRNLWITFITFLSVLGVCSAIYATYY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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