Aibi006548.1
Basic Information
- Insect
- Atherix ibis
- Gene Symbol
- snpc-4
- Assembly
- GCA_958298945.2
- Location
- OY282605.1:139454915-139457215[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-10 1.6e-07 31.9 0.1 1 45 253 298 253 299 0.96 2 4 8e-08 0.00012 22.8 0.0 2 42 308 352 307 355 0.93 3 4 2.8e-13 4.1e-10 40.2 0.0 1 46 362 409 362 409 0.94 4 4 2.5e-13 3.8e-10 40.4 0.1 3 44 417 459 415 461 0.95
Sequence Information
- Coding Sequence
- atgaatataaaatttgatgaacatgagcaaattcaatattttgatgATGATTCGAGCCAAGACAGTGATTCAAGCTTTGATACTTCGCTTTCGGATTATCAGTTTTTGTTACCATCGAATAATTACGTAGAGGAAATTGAAGCATTTATGTTTTCTCACAATaccgtttcaaatgaaaatGCTCTACACTTAAATAGAAAACTACAGCGATTACTGGAGACTTTGAAAAGCAAATTGTctgatattttagtaaaatgtaAAACACGATACGAAAGTAATAAGGCTTTGATACAAAAAAAGTTGCAACATAAACGAAGAAATTATACAGATTATAACATGTGCGGAGCTCCATTTTTCAAGGATGTTAATTCATTTTCAGCTCCTCCAAATGAGGATTATttgaggagaaaaaaaattgataaagaattttttccattagaCTTAGAATTCAAAATGCGCCATCATTGGGTAGTACGAGACAAAATTTGTCTTATTCAAAGTGTAAAAAGACAggTGATTAAATATTTGGAATCTATTGCGGATGaaactaatattaatatgaGAAAAAGACGAAGAGAAGAAGAAATTGATGATAACATAAAAGAACATGATAATCGTTTAGCGGAGTTATTGCCCAAAACAAAAgatgattttaatattaattggtTTGAGAtatcaaattttgatttggattgTAGACACTCTGAAATGGAATGCTGTGCAATGTGGAATGCTTATTTAAAACCAggacttaataaaaaaacatggaGTACAAATGacgaaaataaattactaaaattagctactgaatataattttcaaaaatgggatgaaattgcattaaattttgACGACCGATCACCATATCAATGCATATTGCATTACCAGACTATAATAAATCCTagacaaagagaaaaaaatcagaaatgGACATCTGAAGATGATAAGTTTTTGTTAAGTGCTATTGAATCATCCCGTACAGGATCAATAATACATTGGAATAAAGTTGCTACATACTTCCCCGCTAAAACTCGGAAACAACTATATACAAGATATACTTACACGATCAATCCGGAAATTAATAGAAGACCATTTACAAGAAAGGAAGACTGTGTTCTAATAGCAGCTGTACAAGAATATGGTGAAAACAATTTTAGTTCAATACCTATGTCTCTTTTTCCTGGAAGAACAAATGTGCAAATTAGAAATCGTTATAGAAACGTATTGGTAAATGCTAAAACTCAACGATATTGGACTGTTGAAGATGATAAAATGCTTTTGGAATTAGTTGAACAATATGGATCATCGAATTGGTCAAAGATATCTAGTATCATTACATCACATTCAAGAATTAGTTGTCGGACAAGATACAAtgtaattaaaaagaattttacaaaaaatccaagtttaaaaattgaagaTATTCCACGGAAAAGGAAGGGTGTCTCATCTGATATCACTGAAGCAAACTGGGTCGATAAGATTATGGACATAACCAAAAATGGTGACATGCAATATAAGCAATTGGAAAAGCGTAGGGAAAAAAATAGAGTCCGAatagcaaaaacaacaaactttgAACGATTACGACCTATTGagagagaatattttaatttctttaaatgcgcatacgattataaatttaaaaaatcactaCCACATTCATTAAATATCAGTGCAAATCTTGCTTATTTAGTACACTATATAAATATACGTTTGGTTAACGTTGAGcacattaagaaaaaaaacatttttacaaatgaaGATATTGAAGtgtttaacaattatttagaGCAAAATAATCAGCAAAAACAGATAGCAAGATTACAAGATTTAATgcaaggaaaattttattttccgattAATTGGTGCACATTAATTGGACTGAGAGGTATCACAATATTAGCTGCTGAcaataaaaaaggtaaaaataaaaacaaagtgcAAGCATACTCTGTTCGTGTTGACGAAGCTAAGAAGAAATTTGAGCTCAGatttatgctaatttttttccaaacagcATTATTAAGTAGAATAAGTACAAGCGTTTTACCAGTAGATGAtcctatatttaaaataacatttgtGTTACCGAACAGTAATCCACAATATGAACAAATTGCTAATATAACACCGCCATTAAAAACATATGGTAAACGATTATAA
- Protein Sequence
- MNIKFDEHEQIQYFDDDSSQDSDSSFDTSLSDYQFLLPSNNYVEEIEAFMFSHNTVSNENALHLNRKLQRLLETLKSKLSDILVKCKTRYESNKALIQKKLQHKRRNYTDYNMCGAPFFKDVNSFSAPPNEDYLRRKKIDKEFFPLDLEFKMRHHWVVRDKICLIQSVKRQVIKYLESIADETNINMRKRRREEEIDDNIKEHDNRLAELLPKTKDDFNINWFEISNFDLDCRHSEMECCAMWNAYLKPGLNKKTWSTNDENKLLKLATEYNFQKWDEIALNFDDRSPYQCILHYQTIINPRQREKNQKWTSEDDKFLLSAIESSRTGSIIHWNKVATYFPAKTRKQLYTRYTYTINPEINRRPFTRKEDCVLIAAVQEYGENNFSSIPMSLFPGRTNVQIRNRYRNVLVNAKTQRYWTVEDDKMLLELVEQYGSSNWSKISSIITSHSRISCRTRYNVIKKNFTKNPSLKIEDIPRKRKGVSSDITEANWVDKIMDITKNGDMQYKQLEKRREKNRVRIAKTTNFERLRPIEREYFNFFKCAYDYKFKKSLPHSLNISANLAYLVHYINIRLVNVEHIKKKNIFTNEDIEVFNNYLEQNNQQKQIARLQDLMQGKFYFPINWCTLIGLRGITILAADNKKGKNKNKVQAYSVRVDEAKKKFELRFMLIFFQTALLSRISTSVLPVDDPIFKITFVLPNSNPQYEQIANITPPLKTYGKRL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -