Aibi010140.1
Basic Information
- Insect
- Atherix ibis
- Gene Symbol
- bab1
- Assembly
- GCA_958298945.2
- Location
- OY282606.1:75394701-75403021[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-17 2.1e-13 50.4 0.0 4 42 496 535 493 538 0.95
Sequence Information
- Coding Sequence
- ATGTCAATGCAACAATTCTGTTTGCGTTGGAATAATCACCAGCCAAACTTCATATCAGTGTGCTCTTCATTGTTACACAATGGCACACTTGTAGATGTTACTTTAGCCGCTGAAGGAAGACAGCTGCAGGCACATAAAATAGTATTGTCGGCTTGTAGCTCTTATTTTCAGACGCTCTTTGCATCAAATCCATGTCAACATCCAATTGTGATTTTAAAAGATGTACAATATAATGATCTTAAGACAATGGTAGATTTTATGTATTATGGAGAAGTAAATGTCTCCCAAGAGCAATTACCACATATTCTGAAAACAGCGGGCATGTTGAAAATTAAAGGATTAGCTGACATGCCAGATGCTACAGCCTCCTTAACAAAATCGGAGAGTAAATCGTCGTCAGATCAGACGGAACAAATTCAGGGTTGCGGTAGTGGATCAGAATCAATATGGGGTAGCACAGAATCCCAATTTCAACACCATCATTTGCACCAACAGCATCTACAACACCTTCATCATCAATTACAGgggcaacaacaacagcaacgtaGAACACCATCGCCAACAACGACTGGTACATCACCACTTACACGACGAAAACGGCTGCGAAAATCATCAAGTGGTGGCGGCATTAGTTCCACAGAACATACGTCTGAGGACCAGAGTAGCATCGAAAATCCTACGAACATTAATTTGTCACAAATGAATCAGGTAGCGTTTAGTGGAGCGCAAACAAATTTATCACTAAACATTCATGCAAAATCAATCAAGGGAAGTTCTAGTACGGATACAGAAAATCATCCGCTTGATTCATCGCAGGAGAGTATAGAAGAATCATCCAGTCAACACCAACATCACGTTCAACAAataaaacctaaaatagaaatgGGTACTGCCCAACAGTCAATGCCATTAGACGTTTCTGGTTCTGGTACAGAAACAAAACATGAACCATCATCAGCTAGTTGTTCTCAATCGCAGTCATCACATTCAGGTGTGCAATGGACGGTTGTCGAGTCAAATTATCCACGATTTAGTATATCGATTGGTGCTCCTATAGATGATTCAACAGAAAACAGCAATAATAATACATCAACGAATGGTTCACAACAAAGTGTTAGTAATTCAAGTAGAAATTCTGTTGATgcatcaagccaacaacaacaacaacaacaacaacagcagcatcaccaacaccaacaagaacaacaacacaTACAAATGGAATATCAGAGCGGTGCGTTTACGTCAGAAATAATCTCAGTTAATAATCTCGTAAGCAACTATTCACAAAGTTTATCAACACCCACATCGCCGGCTGAATCGGCAATGGTCCAATCTGTTTATAGTCAAGGTCCAACACCAACTCAATCACCGGTTAATCGATTAACAACAGCTACTCATAATGCAGAGTCTAGTGGTGATGCAATTGCAATTCTTGCTGGAATGACAAAACGCAAACGAGATCGAAATCCGCAAGGTGATCATAACTTCCAATTAGCACTAGAGGCCGTCCGAACAGGTGGTATTGGATTTTGTAAAGCGGCTCGAATGTACGGTGTAAATAATCGTACACTTTGGCTAGAATATAAAAAACGTGGTTATCCGATATGTAGGCAAACAAACGAAATCGTTTTCTCATTCGACAAACCGCCTATTAAGAGGGACAGCGATACAATTAATCAACAATCTCCTGAAATAGAGCTGAGCCAATATGCTCAAGGAGCTTCTTAA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFASNPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAGMLKIKGLADMPDATASLTKSESKSSSDQTEQIQGCGSGSESIWGSTESQFQHHHLHQQHLQHLHHQLQGQQQQQRRTPSPTTTGTSPLTRRKRLRKSSSGGGISSTEHTSEDQSSIENPTNINLSQMNQVAFSGAQTNLSLNIHAKSIKGSSSTDTENHPLDSSQESIEESSSQHQHHVQQIKPKIEMGTAQQSMPLDVSGSGTETKHEPSSASCSQSQSSHSGVQWTVVESNYPRFSISIGAPIDDSTENSNNNTSTNGSQQSVSNSSRNSVDASSQQQQQQQQQQHHQHQQEQQHIQMEYQSGAFTSEIISVNNLVSNYSQSLSTPTSPAESAMVQSVYSQGPTPTQSPVNRLTTATHNAESSGDAIAILAGMTKRKRDRNPQGDHNFQLALEAVRTGGIGFCKAARMYGVNNRTLWLEYKKRGYPICRQTNEIVFSFDKPPIKRDSDTINQQSPEIELSQYAQGAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00176515;
- 90% Identity
- iTF_00176515;
- 80% Identity
- iTF_00176515;