Aibi012006.2
Basic Information
- Insect
- Atherix ibis
- Gene Symbol
- bab1
- Assembly
- GCA_958298945.2
- Location
- OY282606.1:121588168-121590808[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 2.8e-14 53.2 0.0 1 43 45 88 45 90 0.95 2 2 0.15 3.9e+02 1.5 1.2 2 21 182 204 181 209 0.66
Sequence Information
- Coding Sequence
- ATGTTGGACAGAGACAATACCGAACATAGCTACCAATATCAGCTGCAGTCGATGTGGCAGAAATGCTGGAATACAAACCAGAATCTAATGCACCATTTGAGATTTCGTGAACGTGGACCACTGAAATCATGGAGGCCAGAAACAATGGCCGAGGCTATATTCAGTGTGCTGAAAGAGGGATTGTCTTTGTCTCAAGCCGCCCGAAAGTACGACATTCCGTATCCGacgtttgttttgtacgcgaaCCGTGTCCACAACATGTTGGGGCCGTCCATCGATGGTGGTACTGATTTGAGGCCTAAGGGTAGAGGAAGACCTCAACGAATACTCTTGGGCATCTGGCCGGACGAGCATATAAAAGGTGTAATCAAAACGGTAGTTTTTCGTGACGCTAAAGAACTAAAGGAGGAGACCATGCAGCTGGCTTATGGAAGACATTCGcCGGTTTTCCCATTCCAAGATGCGGCAATGGGTTATCCAGGTGGTCCGTGCACAAATGGCTTGCCACAGCAGACGCCTGGGTCTGTGGGAGAATCGATGTCTCCAGAAGCGACTGCAGCTGCTGTAGCCGCTGTTGCACACGGCATTCGGCAACAGATGCAATTGGCCGCGGCTGCCCAACATCATACCGACGCGGCGGGTAACATGTTCAACTTACCATCGCACATGCAGCATTCGAGCGGCAGTGGCGTACCGATACCAAAGCAAAGTTCACCTGCATCAATTGGGCAGATGTCGAACACAAGTGGTCAGAGACACACGTCACCACCATCCATTCCGGGGCTTCCGAACCCAGCGACTATAACAATTCCTGGAATGACAGGGGTCCACGTGATACCGGGCATTGGTGGTAGCACTAGTCAATCGGGCCAATCATCGATGGGATCGACGTTGTATACTTCCAGCAATATTAACAtgagtaacaacaacaacaacaacaacagccacATGGGCAGTAGTACCGGCATGGGCATCATCAACCACAGcatgaacaacaacaacaataataataataacaacaacaacaacaatagtaatattaataataacaataatattagtagcagcaataacaacatcaacaattcCTTATCAACATCAGTTGCTTCCGCTCATATGTCATCTAACACTTCAGTGTCCAGTGCAGCTATGAGTATGCCACGAATCGATTCGCCATCGGATTCTGCCCACGATCTACGAATGAATAGTCCCGACGAAAGTCCACTGAATTCGCCGCTCGAAATGTCCTTGGAACCGGCGGTGAACTTAGCGGTGGGTGTTAGCGGTATGGCGTATAAGCCGTCACGTGGATATTCCTCCCCAAGACCAGAGCACCTCTTCCAAGAGGACATTGCCGATCTGGTTGGCACAGCCCCAAGAAGTTGTCCACCCAACATGAGCAATTTCAAGGAACCCACGTCCGTCATCAAAATCGAACCGATCGGAGAGTGTCGAAGCGAATAA
- Protein Sequence
- MLDRDNTEHSYQYQLQSMWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKELKEETMQLAYGRHSPVFPFQDAAMGYPGGPCTNGLPQQTPGSVGESMSPEATAAAVAAVAHGIRQQMQLAAAAQHHTDAAGNMFNLPSHMQHSSGSGVPIPKQSSPASIGQMSNTSGQRHTSPPSIPGLPNPATITIPGMTGVHVIPGIGGSTSQSGQSSMGSTLYTSSNINMSNNNNNNNSHMGSSTGMGIINHSMNNNNNNNNNNNNNNSNINNNNNISSSNNNINNSLSTSVASAHMSSNTSVSSAAMSMPRIDSPSDSAHDLRMNSPDESPLNSPLEMSLEPAVNLAVGVSGMAYKPSRGYSSPRPEHLFQEDIADLVGTAPRSCPPNMSNFKEPTSVIKIEPIGECRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -