Aibi010136.2
Basic Information
- Insect
- Atherix ibis
- Gene Symbol
- ab
- Assembly
- GCA_958298945.2
- Location
- OY282606.1:75384586-75385897[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.5e-18 1.4e-14 54.1 0.0 2 40 257 295 256 300 0.91 2 3 0.028 71 3.9 0.0 27 38 328 339 323 345 0.88 3 3 3.6e-18 9.1e-15 54.7 0.0 3 44 364 404 362 405 0.96
Sequence Information
- Coding Sequence
- ATGAACAATTTAAAATGGATGGGCCATACAACAACGATTTTGGAAATACAAAAATCATTACACGAAGACTCAAATTACTGTGATGTTAATATTTCTTGCGAAGGGCGTCTGTTTAGATCACACAGGTTCCTCTTGTGCAGTAGtagtgattattttaaaaatatatttgacacCGTTCCGAATGACAAGGAATCTATGATAATAATTCCcgatataaaagaaaacatatttgagaatattttatgttttatatacACCGGGGAAGTTAACGTTAGTTCTAATAATCTATCTGATTTTCTGGAAACTATTAACTTTCTCGGTATTCGAAGTGAAATAACCTTCGACTGTCATTTAAATAAgtcgaaaatatctaaaaactaTGATACTGAATCTGAAACACAAATTACTTCCGTAAAAACGAGTAGTGAAGTTTCCcaagtaattgaaaaaaattttgaagaatatttggaAGTAtacaatgaagaagaaaaaatagaacaatTCGCTATTGAGCCTATGGATAGTAGTGAAAGTAATAGTGATTATATTTTAGCAGAAAATGCAGACAATTCGTTTGTTCTAAATCATGAGCCAAAATCGATACAAAATGCGTCAATAAGTAAGGATTCTTCTATTATACAATTtgtagaaaatgtaaaaaatgaaaatgaatcttATAAGGACTATGAAAGTGATTTtggtgataaaaaaattatatcgatcaaaccgaaaacaaattcaaatattttcgatactGAACAAGCAAGAAACGAAGCTTTTGATAATGCTGTCGATGCTGTTATTAATGGTGGAATGAGTTTACAAAAAGCTGCtgctaaatataatatttctaaaaccgTATTATGGCGAAGAGTTAAAAGATGTTCATCATATAAAAAGGAGCGAGAACACCCGATGCTTTCTCTTGCAATGGAGAAGTTAGAGAAAGGAGAATCGTTGAAAAATATTAGTCAAACATTGAATATTCCAATTTCAACATTACACAGGCATAAAGTTCGTCTATTACAAGAGGGACGTTTACCAAATCATGTGCAATTCAAAAAGAGGGGGTCAAAACATAATCTAAAGGAACGTTTAAAAAAAGCCATCGAAGCATGCCAATGCGGTATGTCTCAAAATCATGCGGCGACTGTATTTGGAGTACCTAAATCAACATTATGGcgacatttgcaaaaaaaagtttcatacaAAAAAGAACCTGAGGAAATAGATAATACAGTATAG
- Protein Sequence
- MNNLKWMGHTTTILEIQKSLHEDSNYCDVNISCEGRLFRSHRFLLCSSSDYFKNIFDTVPNDKESMIIIPDIKENIFENILCFIYTGEVNVSSNNLSDFLETINFLGIRSEITFDCHLNKSKISKNYDTESETQITSVKTSSEVSQVIEKNFEEYLEVYNEEEKIEQFAIEPMDSSESNSDYILAENADNSFVLNHEPKSIQNASISKDSSIIQFVENVKNENESYKDYESDFGDKKIISIKPKTNSNIFDTEQARNEAFDNAVDAVINGGMSLQKAAAKYNISKTVLWRRVKRCSSYKKEREHPMLSLAMEKLEKGESLKNISQTLNIPISTLHRHKVRLLQEGRLPNHVQFKKRGSKHNLKERLKKAIEACQCGMSQNHAATVFGVPKSTLWRHLQKKVSYKKEPEEIDNTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00176531;
- 90% Identity
- iTF_00176531;
- 80% Identity
- iTF_00176531;