Basic Information

Insect: Athalia rosae
Gene Symbol: stc
Assembly: GCA_000344095.2
Location: NW:2049978-2061014[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.1e+04 -5.1 1.5 15 19 524 528 524 528 0.87

2 14 0.25 1.3e+03 -1.2 0.3 4 10 557 563 556 565 0.93

3 14 1.5e-07 0.00078 18.7 15.1 3 18 573 588 563 589 0.88

4 14 0.00018 0.97 8.8 14.8 3 18 627 642 625 643 0.92

5 14 0.47 2.5e+03 -2.1 0.9 5 10 670 675 670 675 0.95

6 14 2.7e-10 1.4e-06 27.4 15.5 1 18 681 698 681 699 0.98

7 14 0.00085 4.5 6.7 12.6 4 18 746 760 739 761 0.85

8 14 2 1.1e+04 -4.4 1.7 5 10 790 795 790 795 0.90

9 14 0.0022 11 5.4 11.0 1 11 801 811 801 823 0.89

10 14 7e-11 3.7e-07 29.3 14.0 1 19 828 846 828 846 0.98

11 14 1.8 9.4e+03 -4.0 0.5 6 10 875 879 874 879 0.80

12 14 2 1.1e+04 -4.8 7.1 10 19 893 903 891 903 0.71

13 14 0.00074 3.9 6.9 16.0 1 16 939 954 929 965 0.83

14 14 1.1e-05 0.059 12.7 14.6 1 19 971 990 971 990 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.1e+04	-5.1	1.5	15	19	524	528	524	528	0.87
2	14	0.25	1.3e+03	-1.2	0.3	4	10	557	563	556	565	0.93
3	14	1.5e-07	0.00078	18.7	15.1	3	18	573	588	563	589	0.88
4	14	0.00018	0.97	8.8	14.8	3	18	627	642	625	643	0.92
5	14	0.47	2.5e+03	-2.1	0.9	5	10	670	675	670	675	0.95
6	14	2.7e-10	1.4e-06	27.4	15.5	1	18	681	698	681	699	0.98
7	14	0.00085	4.5	6.7	12.6	4	18	746	760	739	761	0.85
8	14	2	1.1e+04	-4.4	1.7	5	10	790	795	790	795	0.90
9	14	0.0022	11	5.4	11.0	1	11	801	811	801	823	0.89
10	14	7e-11	3.7e-07	29.3	14.0	1	19	828	846	828	846	0.98
11	14	1.8	9.4e+03	-4.0	0.5	6	10	875	879	874	879	0.80
12	14	2	1.1e+04	-4.8	7.1	10	19	893	903	891	903	0.71
13	14	0.00074	3.9	6.9	16.0	1	16	939	954	929	965	0.83
14	14	1.1e-05	0.059	12.7	14.6	1	19	971	990	971	990	0.96

Sequence Information

Coding Sequence: ATGGCTAGCTGGGATGGGTCCTATTATGGGCCTGAAGACcccaatttttatacgtattcaAACCAAACTAATGTGGCCCAGAACTGGAGCTACCATCCTAAGAATGGTACACACCCTCGGCCAAACCACTCAAATTCAAGTCATGACTCTTCAGTCAACACATGTCAAGATCCACAAGGGACAAGTCATCCTAAGTACAATACATCTCAACCATTTTTTGAGAACAACAGGGCTCCACGGAACCTTCCACCTTTCAAATGCAAGAGTGGTAATCCTGATGACGAGttctggaaaaaatattctacagGGCCAATTCTACATCCACTACAGCCCATAATTGGAACAATTGATCCAagtattgttgaaaattcgaatctgcaCGCAACGGCAGGGGAGTTTGTACCGAGCAGCTTGAAGACACTCCGAAATGTGGCCATGAATTCTGCATCAAGTGATAAAGATAACTTTGGAAGGATGCAAACTGATAATTACGACCTCAAATCTCAGCAGCAAGTGGATAATTCTGGTTTTGGTCCCAATGCGAGTGGGTCCAAGCCCTATTTCTCCGACAATAGAAATATGcgggagaagaaagagaaaaagtatgataataaaaaaggtGATAACCATAAGCAGAGAGATTCCCAAGACACTCAATACCAAAATGCCAATTCATATAAAAATTCTGGTAGGAATTCAGTCtcaaaaaatcgtaaattCCAAAACGAAAGATACTCAAACAGTAGACAGTATGCAGAATATGGTCGCAATTATCCTAGTGATAAGGATAATGATAGAAGAAAATGGACAAATAATGCGGGACCTTCAAACAATGTTAGAGAAACTTTTCCAAACGGTCCCCAATCAGGAGCAGATGATGGAAGTCAATCTCTGAATGGTACTTCCAATAAGTTCTCTAAAACCTCAGTTTATGATAATCCTCTGGCAAACCGCAACTCTAGGCATGAAAATGCTAGACAATCTAGTGGAATGTCAAAATATCATAATGATCGTACCACTGAATCAAATCACTCTAGTCACAATTCTGAAGTTGATTACACTCAAGCTCAAAGCAAAAACGTTCGAAGATATTTCTATGAAGATCGTGGCGAAAGATATCGTGATAGAAGAGAACGATACACTGATAGGTACGAATCTggaatgagggaaaaaaagccCAATTATTCGGATTACaatggatataaaaataattatgaaagaGAAGAACGGGCTGAGCGAGCCAGGGATAAAGATAAATTTAAAGACAAAGAGAATTCCAGAGATGTTAAGGAcaaagatgttgaaaattggcgCAACAAGAAAGATGAAGATAACAAGGGAGGTGCTATGAAAAAGCAGAATAATAAAAGATATGACAAAGATGATGATGCCAGTCAGAGGGAACGTCTCACCGAACAATTGGATAGAGGACAGCTGGAGTGTTTAGTTTGCTGCGATCGTGTCAGGCAACAGGATGCCGTTTGGTCATGTTCAAATTGCTATCACGTTTTACATCTCAAGTGTACCAAGAAATGGGCAAAGTCCTCACAGGCTGaAAATGGATGGCATTGTCCAGCATGCCGAAATGTGACCTCCAGTATCCCAGAAGATTACTATTGTTTCTGCGGTAATACTAGTAATCCAGAGTGGAATCGTCGAGACGTAGCTCATTCTTGTGGTGACCTTTGTGGCCGCCTACGATCACAGACCAACTGCATTCATAAATGTAACCTATTATGTCATCCTGGGCCTTGCCCACCTTGCATGGCAATGGTTACCAAACATTGCGGTTGCGGCAAAACTTCAAAGACATTAAAGTGTAGCACTGAAACTCCTTTGATATGTTCGGCAACTTGCGAGAAGGTCTTGAATTGCTTGACCCACAAATGCGAAAGAGAGTGTCATCACGGAGAGTGTGGAGATTGTGAAAAACTAGTACATCAAGAATGTCATtgtggaaaaaacaaacgagatgTCCCATGCGTGGATGATGTTGCAACGACCTACACTTGCGAATCCAtttgtgataaattattgGAATGCGGTAATCACAACTGCCAAAAGTTATGTCATCCAGGGCCTTGTGAACCATGTGTTCTGAGACCAGAAGCCGTTTCTCATTGCTGCTGTGGACAGACGCCGTTAACTCAACCACGAGATAGCTGTTTGGATGAGATTCCTGTCTGTGACAAGACTTGTTCTAAGCGTCTGAAATGTGGACAGCCTAGTAACCCTCATATGTGTAAAGTACAATGCCATCAAGGAGATTGTCCTGATTGCGAATTGACAACCAAAGTCAAGTGTCGCTGCGGTAATATGGACAAAGAAATTCCGTGCAAAGAATTAACAACCAAAGCTGATGATGCGCGTTGCCAAAAAAGATGCACAAAGAAACGTTCATGTGGCAGGCATAAATGCAACCAGTTGTGTTGTATCGATATTGAACATATCTGTCCGTTGCCTTGCACCCATACTTTGAGTTGCGGCAGGCACAAATGCGAGCAAACTTGTCACAAGGGGAGATGTCAGCCCTGTTGGCGCACCAGTTTTGAAGAACTTTATTGCGAGTGTGGAGCTGCTGTCATTTATCCTCCTGTACCATGTGGAACGAGGCGTCCAGCTTGTGATAGGCCCTGCTCGCGTCAGCAAGTCTGCGAACATTCTGTATTGCACAATTGTCATAGCGAACCAACATGTCCTCCGTGCACCGTTCTCACGCAAAAGTGGTGTTATGGTAATCATGAACTTCGCAAAGCTGTCCCATGTCATGTTAACGAAGTTTCATGTGGGTTGTCTTGCAATAAGCCCTTGTCTTGTAAAAGACATAAGTGCATTACCATATGTCATCCTGGCCCATGTGAAAAACCGGGGCAAGTTTGTGCGCAACCTTGTACAATCCCAAGAGATTTATGCGGCCATATTTGTTCAGCGCCGTGCCACGAGGGCAAGTGTCCTGAAACACCATGCAAAGAAATGGTGAAGGTGACTTGTCAATGTGGGCATAGGAGTATGAGTCGAGCCTGTGCAGAGAATTCTCGCGAGTTCCAAAGAATAGCTAGTGGCATTCTAGCGAGTAAGATGGCTGAAATGCAGCTCGGGCATTCTGTGGATTTAGAAGATGTACTGGGGCAGGGTGcaagaaaacaaaaccagTTAAAAACTTTGGAATGCAATGACGAGTGCAAAATAATAGAGAGAAACCGAAGGTTGGCACTGGGATTGCAAATAGTTAATCCAGATTTGAGTGGAAAGTTAATGCCCAGGTATACAGAGTTCATGAAACAGTGGGGTAAGAAAGATCCGAACTTCTGTCAGATGGTGCACGATAAACTGACCGAGTTAGTCCAGCTGGCTAAAACTTCTAAACAAAAATCTAGAAGCTATTCATTTGAAAGTATGAACCGTGATAAACGTCATTTCGTTCATGAATGTTGCGAACATTTTGGATGCGACAGTCAGGCATACGATCAAGAACCGAAACGGAACATTGTCGCTACAGCTGTCAAAGACAAGtGTTGGTTACCAAGTTTGAGTTTGCTCGAACTACTGCAAAGAGAAAGTGGTCAAAGGAAGGTACCAGGACCAATGTTGAATGCTGCTAAAGCAACAAGCTCTCTGAGAAACGTAGATGTATTACCACTGCCGACTAAAAAGGGTCATAAGATCCAGCCTGTAACTGGGGCCTCAAAGTCACCAGAGCCTGAAATAGATTACTTTGATTACCAGGGATGA
Protein Sequence: MASWDGSYYGPEDPNFYTYSNQTNVAQNWSYHPKNGTHPRPNHSNSSHDSSVNTCQDPQGTSHPKYNTSQPFFENNRAPRNLPPFKCKSGNPDDEFWKKYSTGPILHPLQPIIGTIDPSIVENSNLHATAGEFVPSSLKTLRNVAMNSASSDKDNFGRMQTDNYDLKSQQQVDNSGFGPNASGSKPYFSDNRNMREKKEKKYDNKKGDNHKQRDSQDTQYQNANSYKNSGRNSVSKNRKFQNERYSNSRQYAEYGRNYPSDKDNDRRKWTNNAGPSNNVRETFPNGPQSGADDGSQSLNGTSNKFSKTSVYDNPLANRNSRHENARQSSGMSKYHNDRTTESNHSSHNSEVDYTQAQSKNVRRYFYEDRGERYRDRRERYTDRYESGMREKKPNYSDYNGYKNNYEREERAERARDKDKFKDKENSRDVKDKDVENWRNKKDEDNKGGAMKKQNNKRYDKDDDASQRERLTEQLDRGQLECLVCCDRVRQQDAVWSCSNCYHVLHLKCTKKWAKSSQAENGWHCPACRNVTSSIPEDYYCFCGNTSNPEWNRRDVAHSCGDLCGRLRSQTNCIHKCNLLCHPGPCPPCMAMVTKHCGCGKTSKTLKCSTETPLICSATCEKVLNCLTHKCERECHHGECGDCEKLVHQECHCGKNKRDVPCVDDVATTYTCESICDKLLECGNHNCQKLCHPGPCEPCVLRPEAVSHCCCGQTPLTQPRDSCLDEIPVCDKTCSKRLKCGQPSNPHMCKVQCHQGDCPDCELTTKVKCRCGNMDKEIPCKELTTKADDARCQKRCTKKRSCGRHKCNQLCCIDIEHICPLPCTHTLSCGRHKCEQTCHKGRCQPCWRTSFEELYCECGAAVIYPPVPCGTRRPACDRPCSRQQVCEHSVLHNCHSEPTCPPCTVLTQKWCYGNHELRKAVPCHVNEVSCGLSCNKPLSCKRHKCITICHPGPCEKPGQVCAQPCTIPRDLCGHICSAPCHEGKCPETPCKEMVKVTCQCGHRSMSRACAENSREFQRIASGILASKMAEMQLGHSVDLEDVLGQGARKQNQLKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYTEFMKQWGKKDPNFCQMVHDKLTELVQLAKTSKQKSRSYSFESMNRDKRHFVHECCEHFGCDSQAYDQEPKRNIVATAVKDKCWLPSLSLLELLQRESGQRKVPGPMLNAAKATSSLRNVDVLPLPTKKGHKIQPVTGASKSPEPEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01048573;
90% Identity: iTF_00175446;
80% Identity: -