Aros006457.1
Basic Information
- Insect
- Athalia rosae
- Gene Symbol
- grn
- Assembly
- GCA_000344095.2
- Location
- NW:340189-398240[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.3 4.1e+03 -3.3 0.0 8 19 8 19 6 20 0.82 2 3 1.9e-19 3.4e-16 57.8 4.7 1 35 426 459 426 460 0.98 3 3 6.9e-18 1.2e-14 52.8 5.6 1 35 483 516 483 517 0.97
Sequence Information
- Coding Sequence
- ATGGACATGAGCAGCGAGTCGAGCTCTGCCCGATGGTACGAGCCGCCCAGGGGATCCCTGGAACCACCGACTGGATCCGGGTCGTTGTCTGCGGGTGGGGCTGGCGTCGCGACGGCAGACTACAGGGGATACTACCCTCACGCTGCACCTACTCCTCATCACCCTGCAGCGGCgcacgccgccgccgcgcacTACGCCCACAgtCGAATGTCATCGGCTGGCGTTACGAACGGGGGTGGAAGTCAAGTTTGCAGACCGCACTTTCACAGTTCGGTTCTCCATCCGTGGTTATCGGGCTCGACGGCGGACAGTAAACCCTGGGGTTTCCCGTCGACGACAGCGTCGACAGGAGCGACGTCCGGTTCCGCGGAGGACAAACCCCAGAGTCCGTTGGGCTCGTCCTTACCCCCTACGTCGAGCAGTCTGACGAGTCACGGTGGCGCAGCTTCCGGGCATCACCTCTTCTCGTTTCCACCGACGCCTCCGAAGGACGCGACACCCGACAGCATAACGACCAGCACGACGTCCAGCTcgaataacaacaacaacaacaacaacaacagcagcaacaacaacaacaattctaGTTCACTGGGACTCGGCGGCGGAAGCAGCGAGTATCAAGCCGCCGTTGCTCACGCCGCCGTGATGGGAGCTTTCATCCATCATCAGGACGCTTTGGGATCGACGTCGGGTAGTTCGTGCGACGTGAAACCGTCGGTGATGCTCGGACATCATCACGGCGCTTCATCGCCGCCGCATCAGCACAACGGTTCGAATTCCGGTCAGGTGAAACAACGGGAAGGTAATAACCAGTCGTCTGGAAATGGTTCGATTCAGAACCAGGCGAATCAACAGagcggaggtggaggtggaggaggtggcGGGCCGGGGGTTGGTTCTcatcaacaacagcaacagcaacagcagcagcaacaacagcaacaagaTTATCAAAATCAGGGCGCGACCTCTCCCAGAGATTCCTATGCCCCCTCTCACCACACGTCCGCTGCGGCCTCGCAGTACGATCCCTCCGCCGCTTACAATATGTACCAACACCTTCAATACTCCGGTCATCATTCCCACAATCACCCCCACAACGGCGCGACTATCTTCTCAGGAACCCATCACCCGACCACAGGCGTACCCGGGATTAGCCCCGACGCTAAACTACTAGGTTCACACGGGAATACGCCCAACTCACCCGGgtcgcaacaacaacagcagcaaaaaCCGAGGAACAAATCCAGAACGTCCGCCGAGGGTCGAGAATGCGTCAACTGCGGAGCAACGTCAACCCCTTTGTGGCGACGGGACGGTACCGGTCATTACCTGTGCAACGCCTGTGGTCTCTATTACAAAATGAACGGACAAAATCGACCGCTCATCAAGCCAAAACGACGACTGTCGCTCCAAAGTGCTGCACGAAGAGCGGGTACGAGTTGTGCCAACTGTAAAACGGCCACGACGACGTTATGGCGAAGAAATCAAGCCGGTGAACCAGTTTGCAACGCCTGTGGACTTTACTACAAACTACACAACGTGAACCGACCATTGACGATGAAGAAGGAGGGAATTCAAACGAGGAATCGAAAACTGTCGtcaaagagtaaaaagaagaaggccGGCGGTTGTCTCGGCCTCGGGGGTGTCATGGGTGACATGATCAAGGCCGGGGGACACCTTGACCTAGACAACAAACCCTTCCATTCTGGCTTCGGATCTCCAATGGGTACGTCGCAACACCATCATACGATGCACCCGGCCATGCAGCATTACATGTATCACACGGGCGTCGGTGTTACGGGAGGACTTCATCAGGGTTTTGCTCCACCTCCGGCGCCTCCACCGATCCATCCTcattcccattcccattcccatcACATGGCGAGTCTACAGGGTTTACAGTTGGCGGCTACCACGAACGCCATGAGCGGATGGAGATCCGAGTATACATGA
- Protein Sequence
- MDMSSESSSARWYEPPRGSLEPPTGSGSLSAGGAGVATADYRGYYPHAAPTPHHPAAAHAAAAHYAHSRMSSAGVTNGGGSQVCRPHFHSSVLHPWLSGSTADSKPWGFPSTTASTGATSGSAEDKPQSPLGSSLPPTSSSLTSHGGAASGHHLFSFPPTPPKDATPDSITTSTTSSSNNNNNNNNNSSNNNNNSSSLGLGGGSSEYQAAVAHAAVMGAFIHHQDALGSTSGSSCDVKPSVMLGHHHGASSPPHQHNGSNSGQVKQREGNNQSSGNGSIQNQANQQSGGGGGGGGGPGVGSHQQQQQQQQQQQQQQDYQNQGATSPRDSYAPSHHTSAAASQYDPSAAYNMYQHLQYSGHHSHNHPHNGATIFSGTHHPTTGVPGISPDAKLLGSHGNTPNSPGSQQQQQQKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKAGGHLDLDNKPFHSGFGSPMGTSQHHHTMHPAMQHYMYHTGVGVTGGLHQGFAPPPAPPPIHPHSHSHSHHMASLQGLQLAATTNAMSGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00174688;
- 90% Identity
- -
- 80% Identity
- -