Aros002278.1
Basic Information
- Insect
- Athalia rosae
- Gene Symbol
- HIVEP1_1
- Assembly
- GCA_000344095.2
- Location
- NW:191221-206174[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.00035 0.023 14.4 0.5 2 23 110 131 110 131 0.97 2 9 0.031 2 8.3 2.1 1 21 137 157 137 161 0.85 3 9 0.0028 0.19 11.6 0.0 2 21 356 375 355 376 0.94 4 9 1.1e-06 7.3e-05 22.3 1.6 1 23 1096 1118 1096 1118 0.99 5 9 5e-06 0.00033 20.2 5.2 1 23 1124 1148 1124 1148 0.92 6 9 1.5e-06 0.0001 21.8 0.1 2 23 1833 1854 1832 1854 0.97 7 9 0.0006 0.039 13.7 1.8 1 23 1860 1884 1860 1884 0.92 8 9 0.001 0.067 12.9 3.3 1 23 1905 1929 1905 1929 0.93 9 9 1.5 99 3.0 1.6 1 19 2106 2125 2106 2130 0.81
Sequence Information
- Coding Sequence
- ATGACGACAGaGACAGATACGGTGGCAATGACAGACCCGCAGttgaacaacaacaacaacaataacaacaataacgatggCGAGCCAAAATATctgcataaaaaattcaagaagatGGCCACCAGCGAGGCGGCGACGGTGGaatcgaagagagaaacggTTGCAGTTGAGAATAACCGCATGGTCACCGTTACTCGAGGAGataacgagaaggaaaaaaaaggtggggaATCAGATGAGGTGGGAGAAGAATCAACGACGGCCAAGACGGAAGCATCTCCAGAACCCGACGGTGAGGTGGGaggcgaggggaaaaaaagcggaaatGTTTGTCCGTATTGTAAATTGTCATGCGCCAAACCGAGCGTACTCCAAAAACACATCAGAGCACACACGAATGAACGACCATTTCCATGCGTCCCCTGCGGGTTTGCCTTCAAAACGAGATCTAATCTTTATAAACACTGCAGGTCCAGAGCACATGCGCTTAGAATAGAGGGAGGAGATTCTAGCAAGGTTTCAGAGGATTCAGATATTAGCCTTTCGGACAGCGCCAGTAATGGGACGGGAACACCACCTCCGCCGATCTCTTCTTCGGCACCGAATTCGGCACCGCAAACGTTGAAAACAGTAAAAACCGGGAAAATATACAAGCCGAAATTTCACACGGCACTCAATAGCGTCGGGCATGATTCCGAGGTGTCTTCAATTTCTAGTAACTCGTCGACGAATTCTACAAACTCCGGGTCCAACAACAAACCTAACGCCGAACAGCTACAGGAACacatagataaaataataacggccAATCAGGCGATAGTCGACGCCGTGGATCCGAGACTTCATAAATTAATGCAGAGACAGCAGAGCCTTGTTGAGCCCCAATATGCGTCCGAACAACCTTTAAACCTGTCGTCGGCCGAGGAGAATTCGTTGCAGAGAAAAAGATGTTACAGTGAAAGTTTCGCGTTTGAAAAAGAACCGGAAGGATCGATAATGAAAGATCTACTTTCGAAGACCAAAGGAGCACAAAATTCCGAGAGCCTCGGCGATCAGGAAACCCTCGTATGTCCGGTCTGCAAGATACCTTACACAAGTATCGACAATCTCGAAGCGCACAGGAGATATTATTGCAAGGGTACGCCGAACCAGAGGAAACCGGAGTTTCAACTCGATCTCGATAAAAAGGAACATCCAGATTACGATCTGAAGTCAGATTATTACAGCACCCTCCAACCTTTACCTTCCCCCGGCCCGTTACTCGGTAACACAAGACTCGTCGACGCTTACGTACCACCGCAAACGAAACAGAGGTCGGAATCAGCTCCGACGACGTTGAGGTCGTTAGAAGAACTTTCTAAATATCCAAGGCCGAATTCGCTGCAGATGTTCGGAGGGGAGGTCAGGATATTGGATAATACCGGTGAGACGAAAACAATGAGGATAGAACCTCGTCAAAGTAATTCGCCGTCGTCCGCGTCCGATCACGTGGTGAATAACAAATGTGCCACGTCCGAAACATCGTCGATCGTCGTAAGGTCGGGATTACACTCCGGTGGCACGATGGTCCATAAGCCACCGGGTAGTTCAACGTCGACACCTAGCAGTACAATTTCTTTACCAAATACACCTAAGATGCTCGCACCTATCATACCGAACATATCAACCCCAAATATTGCCCCGACGATATCATGCTATGGTTATTTAGAACCAAATCTTAATCCCCTTAACAACATCACTGCCTATAACCCCCTGACATTGCCGCAGGCGGGTATCGCGAGCATTTTTCACGGTGGTAAGGTGATACCGCATGTACCAGGTATGCCGGGACCTCACAGTCTCTCTGGTTTGCAGACCGGCGATATTCCCACAGGAAATTCAACCGGATCGGAAAATAGTTATAAAGTAATACCTGGATTACCCGGACTGCACGTCGTCGCGCAACCTCTGGATTTAGCCAGTCCTGTTAAGATACAAACACCAAACATTCCGGGAATACCAGGACCCCACTCTAATATTATGCCAACACCGGCTGGGCAACCTCTTGATTTGGCGAGTCCGCCGAGAGATTTTAAATTCTCAAGTTTCAGTAAACCGTCGAACAACGGTGGTTTCAGGAGCGGTGCGGTGAACCCGAAAATTCCGGGGacaaaaaatgaggagaaatttAGAAACAGAACGGAACACGATCGTCATAAGGGAGGTGGCGGTACTATCAAGCAGTACAAGGGTGTCGAGACCCCCAGAGAAAGGAGAGAATTTGGATACGAAAAAAGCCCGAAGTCAGAGAAGGTGTTCTCGTATCCCAATGGGGCAAACGAAGGTGCAGTCAACACGTACGGAATTTCGCAAAGGTATTCTCCTAAGAGTCCGAATGTTTCGGAGAGCAGAAAAAGACCATGCGGATGGTCGGGTAATCCGGAAACGTTGGAACCCCTTCGTCGCAGTCCAATTTTGAAACACGAACCGCCATCGCCCCATGAAAATGGTCGTATAAAAGATACGAGTCTTCCAGATGTTAAAGCAAGGCTTTTTGGGAGCTATGATAATGGATCGATGGACATTAACGGTGTTAAAATGAAAACAGTCGAGTGTGTAACGCCTACGATAACTGTGAACGTTGATAATActtctaattttaattcttcttccaAAATAAACGAAGTGCCAAATAGATTATCATCACCTGGTGATCAGTTCgttgttaaaaatattaataaggTATCGGAAGAATCGAGTGAACCGGAAAGTAACTCAAAATTTCTCAGGCCGACATCGCTTCCGCTTAAACCAGGAACATTCACCCCGAAAAGACATCATGGAATAACACCAACCGCGAATACCCTACCGCTTATCAGTCCAGAGACACCTAGACCCAGGAAATCCTATGGACAACTGTATCTGAATGGACACGCCTACACCTACCTGGGACTGAAGTGTTCCACCAGAGTGTTTTACTGTACTTTAAACAGGCCTCAGCCTATGTACGTTACGCAACAACATGGACTGTCCATGTATTCCAATTGGAAAATCTGCAAAGAAGCACCTCCTGACTTGGACATGGCTCATTACGACTCTAGGCATCGGCCAGCTAGCTATACAATCGCGTGTAAAAAACAGGAAGATATTCTAACGCACTCTTCCCAGAGGCCAACGACACCAGCGAGTCCAGACAACAACTCGGAAAATGATACGcaagaaaaagcgaaacgcgtcaaaatttttgacgGCGGATTTGAGAGCAATGAGGACTACATCTACGTCAGGGGAAGAGGCCGGGGTAGATACGTTTGCGAAGAATGTGGAATCCGATGCAAGAAACCTTCCATGCTGAAGAAACATATCAGAACGCATACAGACGTCAGACCGTATACCTGCAAGCACTGCACTTTTAGtttTAAGACGAAGGGGAACTTGACAAAGCATATGAAATCTAAGGCACATTACAAGAAATGCGTCGAACTTGGCGTAGTTCCTGTACCGACTTTAGTATGTGATGAGAACATCGACAAAGACGCGGTTGCTCGGTTGGCCGCGGGTGGTGGAAATGCCGAAGAGTcttccgaagaagaagaagacaccGAGGGAGAAGAGAGCGAAGAGTCCGGAAGTGAAGAACATGAAGCTGCACAGGGACTTCTGAGTCTTTCGCAAAGAAGTGCTAATAGATTACCTGGGCTGCTTCCATCGGGAAGACCAACCACTTATCCGTACACCTTAACGTTATCTCCAAGTACTGTTTGTAGTACCGTTGTTACAACGACAACCACTTCAGCACCTCTTAGCAGCCAAGCTGCGGCTGTTATTCAAAGTGAATTGTcacatcgttattattttccgtcAAATCGTTCTGTACCAGAAAAACCTAGAAGTAGTGTTATTATACAGTCTTCCAAAAAATCGTCGGATTCTGAGATTGAGAATGACGACATTACCGTAGTGGTTACTGATACTCAAGGGAGTTCTCCCCAGCAGCCCATGGACCTAACAACCAAACAAACCCCGACCAATTGTTCTCGTAATATTTCATCACATAGAGTTAAACCTGCTGATATTCTTACTCCGGTTTCCGAACCTGTTTTACTTCAGACCATTGTTCAGACCATGGAAAGACTTCCTGTGCAAGGAAGAGAATGGAAATCAGACGCACAAGGTCATATGCTACAAGCTTACCTCACGGAAAGGCACGTTATGGACAGTAAAATGAAGCTACAATATCGAGTTGGCAGTTCTAAGGACATGCAGACAAATAAACAACGTGATGCTATTAGATCAAAGAATTTAGACCTCAACGGTGTACCAACTGTGACCTATACAGATCCCAGCAAAATGCAGCACACGTTTTCAGATgcaaggataaaaaatatggtttTGAAACAGAACACGGATGATATGCTACTTGAAATCAGGGATAAAATGTACCATGGTAATTTGCCTGTTGAAAGGAGACTCTTTGATACCGAATCCGTCTACAAGGACAAAGAAAACGCCAATAGATTGATCTCAGATTCGGAAGGTCAATTTGATCACCGAGCCGTGGAGGGAAGTCCAATCATGACATCTAAAACGAATATTGTCGAAAGAATGCATTTTGTGATGGAACCTGTTGGGAGAATTACACCTGTTGCGATTGAAAGGCAATCACCTAGGCACTTTAATATGGAAATGATCAACAGGAATTCGTCAGCctcaagagaaataaaaagcgagaTGGATAGAAGCACCATGTTCaatgcgataaaaatgatgaatgaaattgaaaggcCCAGGGATTGCCATACCCCAAATATACAGGATCCAGTAAACAGGCCACCGAGTCGAGAAACAAGAGTACAAAGTCATAGCCCAAGGTCACATCAAGATTTGAGACCACCAAGCAGGGAGATATGTCGTACACCGAATCAAGAACCTAGAACGTCTTCAGAAAAGCCTACTCAGGAGTTTAGGCTACCCAATAACGAGCTTAGAATACCTAGTCAAGAACCATTTAAGCCTGGTAATCAGGACGTAAGAAATACGAGCCAGGAGATGACCTCTCCTACTAACGTTTCGGAGTTCAGAATACAAATGAATTCGGAGACTCTGAGACCACCGAGTCGAGAAACCAGACAATCTCAAAGTCAGGTTCAATTGCAGCCACAGGATACTAAAACAAACTTTGACGTGATATCGAAATCTGGAGAAATTCCTAGAACTACGGGTTCTCAGGATAATCAGAAATCTCAGAGCATTATTGAACCCAGAAGTAGCATTATTGAACCCAGAAATAGCAACAATGAACGGACTGAGATCAAACAGAGTATTGATGTGGCTAAACAGAATATGGCAGAGAATATCAAACACTCTGTAGCAAGGAAAATGGTCGTCGGTGGACCCGGATTCAGATCACCTTCACCTCCTGGAGGAGGTGGGAAACCGCAAGCAGAATTTTTACAGCCATCGACTGGTCCTGCCCCCAATTATGTCAGTTACAGTGTGACTGAAGACGGCCGAAGCGTTTGCGGAATTTGCAACAAGGTCTTCAGTAAGCCAAGTCAGCTTAGGTTACACATCAACATTCACTACTTCGAACGTCCCTTCAGGTGTGAAAGTTGTGCAGTATCATTCAGAACAAAAGGACATCTCACTAAACACGAGCGATCGGTTTCCCACCATAATAAGgtCAGTATGACGTCCACTTTTGGGGCAGCTACAACGAGTAATCCTCGTCCCTTCAAATGTACGGACTGTAAAATCGCGTTCAGGATACACGGGCATTTGGCAAAGCACTTGCGAAGTAAAATGCATATTATGAAGTTAGAATGCCTCGGAAAATTACCGTTTGGTACTTACGCGGAGATGGAAAGATCCGGGATTAATATGAACGACATCGACACCAGTGACTGTGATAATAGTCTTACTAGTCTCCAGAGTTTGGCTCAGAAATTGTACGAAAAGGATCCAAGTAAGATGGGTCAATGGGACACCGAAATCGTTCCTAGTCAGGGTGCAAGCGGTGGTGAGACATCATCTGATGAGGGAGAACCGATTCCTCTGCATCCTTTGCATCATTATCCTCAATCAATATCTTCGGAAAATGATCTTCCTGGTTCTCGAAGTTATCACATGCCAATTTTAGTCAGCGAAGAATCAAAACCAATTGCTGAAATTCGACATGCGAATCCTCAGTTCAGCCACCATCAGCAAAGAGTAACAGATTTCAGTGGTATAAGCGAGCCACGACAGCATGTGAGAAACGTTGTGAGAACAAATTTAGCTGGtcaaaatgaaatcgaagatATCAACAGGGTTGACGATGGTATTCAACAGATACAGTATAAATGCAGTATTTGTTCAAAGTCAATTTTTAGAACTCTAAACGAATTACAAGTACACTGTTTTGTAGAGCACAATATCGAAGCTGATTCCTCATCATGTCCTTCGTTAATAATTGGTGTAGGTATAAATCATAGTGATAGAAGTGGCAGCGAGGGTAAAGACTCTATCGTGAGTGGAGATAACTTAAAAAATCGCACTCAAAAAAGAACTAACGATTCAGACGACGACCTTTTTAATAGAGACGATctaaagagacaaaaaaaggtTATCGATGATACATAG
- Protein Sequence
- MTTETDTVAMTDPQLNNNNNNNNNNDGEPKYLHKKFKKMATSEAATVESKRETVAVENNRMVTVTRGDNEKEKKGGESDEVGEESTTAKTEASPEPDGEVGGEGKKSGNVCPYCKLSCAKPSVLQKHIRAHTNERPFPCVPCGFAFKTRSNLYKHCRSRAHALRIEGGDSSKVSEDSDISLSDSASNGTGTPPPPISSSAPNSAPQTLKTVKTGKIYKPKFHTALNSVGHDSEVSSISSNSSTNSTNSGSNNKPNAEQLQEHIDKIITANQAIVDAVDPRLHKLMQRQQSLVEPQYASEQPLNLSSAEENSLQRKRCYSESFAFEKEPEGSIMKDLLSKTKGAQNSESLGDQETLVCPVCKIPYTSIDNLEAHRRYYCKGTPNQRKPEFQLDLDKKEHPDYDLKSDYYSTLQPLPSPGPLLGNTRLVDAYVPPQTKQRSESAPTTLRSLEELSKYPRPNSLQMFGGEVRILDNTGETKTMRIEPRQSNSPSSASDHVVNNKCATSETSSIVVRSGLHSGGTMVHKPPGSSTSTPSSTISLPNTPKMLAPIIPNISTPNIAPTISCYGYLEPNLNPLNNITAYNPLTLPQAGIASIFHGGKVIPHVPGMPGPHSLSGLQTGDIPTGNSTGSENSYKVIPGLPGLHVVAQPLDLASPVKIQTPNIPGIPGPHSNIMPTPAGQPLDLASPPRDFKFSSFSKPSNNGGFRSGAVNPKIPGTKNEEKFRNRTEHDRHKGGGGTIKQYKGVETPRERREFGYEKSPKSEKVFSYPNGANEGAVNTYGISQRYSPKSPNVSESRKRPCGWSGNPETLEPLRRSPILKHEPPSPHENGRIKDTSLPDVKARLFGSYDNGSMDINGVKMKTVECVTPTITVNVDNTSNFNSSSKINEVPNRLSSPGDQFVVKNINKVSEESSEPESNSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPRKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEAPPDLDMAHYDSRHRPASYTIACKKQEDILTHSSQRPTTPASPDNNSENDTQEKAKRVKIFDGGFESNEDYIYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCTFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTLVCDENIDKDAVARLAAGGGNAEESSEEEEDTEGEESEESGSEEHEAAQGLLSLSQRSANRLPGLLPSGRPTTYPYTLTLSPSTVCSTVVTTTTTSAPLSSQAAAVIQSELSHRYYFPSNRSVPEKPRSSVIIQSSKKSSDSEIENDDITVVVTDTQGSSPQQPMDLTTKQTPTNCSRNISSHRVKPADILTPVSEPVLLQTIVQTMERLPVQGREWKSDAQGHMLQAYLTERHVMDSKMKLQYRVGSSKDMQTNKQRDAIRSKNLDLNGVPTVTYTDPSKMQHTFSDARIKNMVLKQNTDDMLLEIRDKMYHGNLPVERRLFDTESVYKDKENANRLISDSEGQFDHRAVEGSPIMTSKTNIVERMHFVMEPVGRITPVAIERQSPRHFNMEMINRNSSASREIKSEMDRSTMFNAIKMMNEIERPRDCHTPNIQDPVNRPPSRETRVQSHSPRSHQDLRPPSREICRTPNQEPRTSSEKPTQEFRLPNNELRIPSQEPFKPGNQDVRNTSQEMTSPTNVSEFRIQMNSETLRPPSRETRQSQSQVQLQPQDTKTNFDVISKSGEIPRTTGSQDNQKSQSIIEPRSSIIEPRNSNNERTEIKQSIDVAKQNMAENIKHSVARKMVVGGPGFRSPSPPGGGGKPQAEFLQPSTGPAPNYVSYSVTEDGRSVCGICNKVFSKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGINMNDIDTSDCDNSLTSLQSLAQKLYEKDPSKMGQWDTEIVPSQGASGGETSSDEGEPIPLHPLHHYPQSISSENDLPGSRSYHMPILVSEESKPIAEIRHANPQFSHHQQRVTDFSGISEPRQHVRNVVRTNLAGQNEIEDINRVDDGIQQIQYKCSICSKSIFRTLNELQVHCFVEHNIEADSSSCPSLIIGVGINHSDRSGSEGKDSIVSGDNLKNRTQKRTNDSDDDLFNRDDLKRQKKVIDDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00175309;
- 90% Identity
- -
- 80% Identity
- -