Basic Information

Insect: Athalia rosae
Gene Symbol: -
Assembly: GCA_000344095.2
Location: NW:1658661-1664801[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00034 0.023 14.4 0.5 1 23 193 216 193 216 0.95

2 9 6.3e-06 0.00041 19.9 2.5 1 23 221 243 221 243 0.99

3 9 6.5e-06 0.00043 19.9 2.4 1 23 249 271 249 271 0.97

4 9 0.00061 0.04 13.7 0.9 3 23 279 300 277 300 0.96

5 9 8.4e-05 0.0055 16.4 2.8 1 23 306 328 306 328 0.95

6 9 2.6e-06 0.00017 21.1 0.5 1 23 334 356 334 356 0.98

7 9 0.00077 0.051 13.3 5.5 1 23 362 384 362 384 0.96

8 9 4.1e-07 2.7e-05 23.6 0.4 1 23 390 412 390 412 0.97

9 9 0.00082 0.054 13.3 1.3 2 23 420 441 419 441 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00034	0.023	14.4	0.5	1	23	193	216	193	216	0.95
2	9	6.3e-06	0.00041	19.9	2.5	1	23	221	243	221	243	0.99
3	9	6.5e-06	0.00043	19.9	2.4	1	23	249	271	249	271	0.97
4	9	0.00061	0.04	13.7	0.9	3	23	279	300	277	300	0.96
5	9	8.4e-05	0.0055	16.4	2.8	1	23	306	328	306	328	0.95
6	9	2.6e-06	0.00017	21.1	0.5	1	23	334	356	334	356	0.98
7	9	0.00077	0.051	13.3	5.5	1	23	362	384	362	384	0.96
8	9	4.1e-07	2.7e-05	23.6	0.4	1	23	390	412	390	412	0.97
9	9	0.00082	0.054	13.3	1.3	2	23	420	441	419	441	0.96

Sequence Information

Coding Sequence: ATGGAGAATAGATTGGCGCCGCTGAGATCCAGGCGGGTGTGCCGATTCTGCCTGACAGAGTCGGAGCCACTCAGCTTCATCTACGAAAGGGATCATAGCAAGCCGTTCCAAGTGCCGCTTACCCTACAAATCATGTCGTGCGTCGCGATTGAGGTGTATGCCGCGGATGGAATGCCACAGATGATATGCTCGATTTGTCGTTGGAATCTGGACCACTCTtacaaatttaaaattcagTGTAAGAAAGCTGACGAAGCATTGAGAGCTTATCCAGTGTCGGGAGTGCTACCCCGACCATTTCCAGCTCTACCTACTAACCCACCCGAATCGACAAATAAAAGATTACCTGACCAGAGATCTCAAAATGAACAATCTAAAAAACCACGTCTCGAAGAtggcgaaagagagagaagggagcTGAGAGACAGGGAGCGGGACAGGCAGTCGGAAAAAGAGACGGACAACAACGATCGCCATGACATGTACGAAGATGACCAAGACGGAGGTAGCTATGGAGAGAATGAACACcagaatgaaaaagttatcgcCCAGCTAGAACCCGGTGAAATAAGAGTTCATGCCTGTGATCAGTGTGATAGGACCTTTCCTTTGAGACAGGCACTCCAAATCCATCTCCAGAAAGCTCACAGAGATCGAAATTACAAATGTACCGAATGCAACAAACTCTTCTTTTCGAAATATGATTTGACCAAGCATCTTGCCACCCATTCCGATGTAAAACCGTTTATTTGTCAAATCTGCAACAAACATTTCACTAGGGTGAGCCTCCTGCAGCGccacgaaaaaattcatagagaTGAGCTCAGATACGGATGCCAGCACTGCGATCGGGAATTCTTCACGACGGATGAATTGGAAAAACATGAAGAAACTGTACACAAAGCCTCTAAACCGTTCCATTGCAATATATGCAATAAAAGATTCACTTATCGGCAAGGACTCGAGCGCCATGAACTATTACACAGCGATGACAAAAGTTTCGTTTGCGAATACTGCAAAGAAGCATTCAGATCGAGTACCGAACTCGCTAGACATCTCACTACGCACGCTGGGCATAGACCTTATTTGTGCAAACTATGCCCTAGGACTTTTCTGCTATCTCATCATCTGACCAGACACATGAGAACGCACTCGGTGGAAAAACCTCACGTATGCGAAGAGTGTGGCAAGGCTTTCAAGCGTAAAGAAAGCCTAGAAGTGCACGCGCTGACCCATTCGAAGCGTGGTATGGGCTTGACCTGTGACATCTGCCAAGAATCTTGCAGAAATCGGGCAGATTATGTGACCCACATCAAACAGCATATCGAAGCGGGTGAGAAGATGGGCCCTGATGGACTCCGACCGGATAatcgaaacgataaaatagACTCGCAGTctgaggaggaggaagaagaggaggataCCGACGGTGATGACGATTACGAGCCACCAGGGTACATAGCCAAAAAGATTCCGAAGCTCGAGCCACCAGAGAGCGatgaagaaatggaaaaatcggACAAGAAGGAGCAAGTCGTTTACGTCAGAAATAAAGATGGGAATGTTGTtaagaaaacgataaaaactcTGATGCCCATCCATAAACGGGAGATTCAGGATAACAAGGCAAGGCCGGGTCCCAGCGGTTCTCAGTCTACGAGAAATAATTCCGGTAAAGGAGAAGGCAGGCCTGTGACCTCAGACAATGAATCGACGCCAAGGCTTCGTTCTCAGCATCGTAACGTCGATGACACAGAAGCACAAGTACAAAAGATAGTTGCCCAGGTCTTCAAGGAGCATAAGATACCCCTAAAGCACCAAAACATTCCATCAGAACAGTCGAAGGATTCAGCGGGCGCATCTACTCCCGATCACGTACAGACTCGCTCTCAAAAAGCGACACCGACTACAGTTTCGACACCAACGGTCGCCGCTAGTCAAAAAGACGATTCTGTGAAGTCGGAAACTGCCACTCCGAAATCAGTCAACACTGTAAAAGTTATAAAGCGAATTGTCGTCAGGAAGCCCGCCGGTAGCGCTGAAGGAGTGCAAGCTGCTTTAGCCGCATGTGTTAAGGATGAAAGCCCGACCACATCGAGTGTAAGTGGTGCTAAAATTACGAAGAGAGTGATCGTTCGGCGGATCATCAGACACGGTGACACCACTCGAGAAGTTATCATGAATCCGGACGGGACGATTCTCGATCCCGTCGAACTCGCGAAATTGCCGACACGTAATGTCGTCAAGCGGGTGGTTGTTAGAAAAGCGAAGGAAAAGGTTCAAGAACAGGGGGATCAGCAAATTAAAACTGAATCGTCCGAGTCGAATTTAATAGATTCACCGAAGTTCGAATTGAAGACCACGCAATCGACGAATGTACAGAAATCGAGTGGCCTCGTACAGAAACCATCCGAAAGTAAATCCGGGCAGCGAGGATCTGAAACGACGGTGACGTCGTCAGAAATAAACGATGAGAATCCAGAGAGTACCaaagagaaattagaaaaactagaaaaacgTGTGGAGCAGCAGAGATTGAAGATTGAGGAATTGCAAGCaagaaaacaacaagaaaTTGATTCCGTTGAAGATATGTTACCGGAAAGACAAGATGAATCCGAAGAAGAACAACAGCTACCCTTGAAGCGAGTGTTTGTAAAGAGGAAGCAGAGTGTTtatgacgaagaaaaggaatatGACAGTGATGAAAAGGAATCAGTCAGCGTAAAGGAAGAGCCTCTCTCAGTCAAAGAAGAGTTCGGGGCATCTCAGGAATCACCAAAAAAAGATTACAAGAAGCCAATAGTAACGAGTAGCTCTAAAGTCTACGGCAACAAAAAGATCATTTTGATAAAATCGGAAGAACCGTCAGCTCTAGACGACAGTTCGATGAGTCGGGAGTTGAGTAGCATTCTAGATGACTCGGAGACTGCAGTGAAAATGCAAGATAACGTTCTCAGTAATCTCTCTCAGATTTCGGCGCTTGATGAAACCGAGCAAATAAAGcttgaagttgaaaatatgTCCACCGATGAACAAATCGGCGGACATATTTTGGACTCGAGCAATGTCCGAGACGATCTAAAAGCTACTGAAGATAAAAGCCGCGAGTCATTGCTAGAAGACTTGCAAGCAGGCGATAAAAGTGAAGACGAAGAAATGATTCAGGCGCAAGAAGATGGCGGTGATAACGAGGACGTCCAAATTATAGAAACAACAGTTGAGCACGACGAAAGTAATCagcattcattattattagaaaGTCAAGGCGTTACAGACGCTGCAGATAGTTTTGTTGCTTCAAACTCTAATTTAAATGGCCAGAAGCCGGAAGATCCGGATATAGAAGATACTTCGATGGAGGTATCGAATAATACGATTAATCTAAGCGAAACTAACGAAACTCAGGACAGCATAGAGGATAAATTGTCACAACTTGACAGCTAA
Protein Sequence: MENRLAPLRSRRVCRFCLTESEPLSFIYERDHSKPFQVPLTLQIMSCVAIEVYAADGMPQMICSICRWNLDHSYKFKIQCKKADEALRAYPVSGVLPRPFPALPTNPPESTNKRLPDQRSQNEQSKKPRLEDGERERRELRDRERDRQSEKETDNNDRHDMYEDDQDGGSYGENEHQNEKVIAQLEPGEIRVHACDQCDRTFPLRQALQIHLQKAHRDRNYKCTECNKLFFSKYDLTKHLATHSDVKPFICQICNKHFTRVSLLQRHEKIHRDELRYGCQHCDREFFTTDELEKHEETVHKASKPFHCNICNKRFTYRQGLERHELLHSDDKSFVCEYCKEAFRSSTELARHLTTHAGHRPYLCKLCPRTFLLSHHLTRHMRTHSVEKPHVCEECGKAFKRKESLEVHALTHSKRGMGLTCDICQESCRNRADYVTHIKQHIEAGEKMGPDGLRPDNRNDKIDSQSEEEEEEEDTDGDDDYEPPGYIAKKIPKLEPPESDEEMEKSDKKEQVVYVRNKDGNVVKKTIKTLMPIHKREIQDNKARPGPSGSQSTRNNSGKGEGRPVTSDNESTPRLRSQHRNVDDTEAQVQKIVAQVFKEHKIPLKHQNIPSEQSKDSAGASTPDHVQTRSQKATPTTVSTPTVAASQKDDSVKSETATPKSVNTVKVIKRIVVRKPAGSAEGVQAALAACVKDESPTTSSVSGAKITKRVIVRRIIRHGDTTREVIMNPDGTILDPVELAKLPTRNVVKRVVVRKAKEKVQEQGDQQIKTESSESNLIDSPKFELKTTQSTNVQKSSGLVQKPSESKSGQRGSETTVTSSEINDENPESTKEKLEKLEKRVEQQRLKIEELQARKQQEIDSVEDMLPERQDESEEEQQLPLKRVFVKRKQSVYDEEKEYDSDEKESVSVKEEPLSVKEEFGASQESPKKDYKKPIVTSSSKVYGNKKIILIKSEEPSALDDSSMSRELSSILDDSETAVKMQDNVLSNLSQISALDETEQIKLEVENMSTDEQIGGHILDSSNVRDDLKATEDKSRESLLEDLQAGDKSEDEEMIQAQEDGGDNEDVQIIETTVEHDESNQHSLLLESQGVTDAADSFVASNSNLNGQKPEDPDIEDTSMEVSNNTINLSETNETQDSIEDKLSQLDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00175275; iTF_00174525;
90% Identity: iTF_00174525;
80% Identity: -