Aros006024.1
Basic Information
- Insect
- Athalia rosae
- Gene Symbol
- retn
- Assembly
- GCA_000344095.2
- Location
- NW:136814-206405[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-26 9.4e-23 79.7 0.0 2 89 285 370 284 370 0.96
Sequence Information
- Coding Sequence
- ATGGAGATATCGGACGAATTTCAGGACATGGGGAATCCCGGTGGGGGCGTAGCCATGGCCAATATCTCGATGAACCATCACCACCACACACCTGACAGTCCTATGTCGCATCAGGAAGAGGACTTGTCCGATCCGGATCTCCAGGATGAGGAGAGTGGCGAGGAGTTGCCCCAGCAACCTCTTCAAGGCAACGGTCACACGTCGGCGTCGACAACGCCGATACCGAGCAACGCTCCGACGCCGTTGACGCATCTGAACAGCCTAATGAATTCGCATCACCCGCACTTTTtggcgaaattgaaaatggacGTGAGTATTTCCCCAGAGAGTATAATTCCTTCGTCATCGGCTCCGAGCTATTCGGACGAGAGGGTGTCGTCCCTGCTGACGGGCGAAAGATCGACGAATATCGGTACGCGTAACGGTAGTACGATTAATCAAATTAACGCATCGTTGTCGcgacaacagcaacaacaactcCAACACCAGGACATGGACGTCCTGTCGAACAAAAGCGGCCTGGAGGCGCTCCAAGCCGCCATGGGAAGCGGCGGATTCAATTTACCCTTTTCCTTTCCGCCACCCGCCGCGTTTCTCGCGCCTCCGCATCATTCGCAAGGACAAAATTTCACCACCGGCGGTAGCAACAACGCCGTTACCTCGTCGGCGAGTTCACACTCCAGCGAATCGTCGCAAGGAAGCGGAAGAAACGGCGGTGAGTCGAGGTGCAGAACGGAGGACGGACATTCGCAAAATAACATCGGTGGCAATCATCAGCAACAAACCAGTTGGAGCTTCGAGGAGCAGTTCAAACAGGTGCGTCAGttGTACGAGATCAACGATGACCCGAAACGCAAGGAATTTTTGGACGACCTGTTCAGCTACATGCAAAAACGTGGAACACCGATCAATCGGTTACCAATAATGGCCAAATCAGTTCTCGATCTATACGAATTGTACAACCTGGTCATCGCCAGGGGTGGGCTCGTTGAtgtgataaacaaaaaattgtggCAGGAAATCATCAAAGGACTCCATCTTCCTTCGAGTATCACATCGGCAGCTTTCACGTTGCGCACGCAGTACATGAAATACCTCTACCCCTACGAGTGCGAGAAGAGGAGGCTCTCGACGCCGGCTGAACTGCAGGCGGCAATCGACGGTAACAGACGGGAAGGTCGGAGGAGCAGTTACGGTGCTTACGGGGGTGGCGGAGGCGCCGGCGATTCGATGGTCCGCGGCAGTCCTCACACCCCGAGTTCGCTTTCGTTGCACGCCCAAATGTCACCCCTTTCACTCGTGACGGCTGTCGCTGCCGGTGGACAACATCACGGACAACAATCACTCGTCAACGGAAGCGCCGCGCATACGCCGGTATCGCATCATCCGCATCATCCGCAACATCCGCAAGGTTTGCCGCTTGGACAACCCCTGAATTCTGGCCCGATACCGGGACTCGCACCTTCGGAATTCGAGGCCCGTATGGTCGAGTACGTTAAACTTTTGAACAAGGAACTCAGGAGTGCCGGAGCAGGGACGCCGCCCCCGATGATCCATCGGCAGGGTAGCGCCTCGCCACCTTCTTCTACTTCGCCTCGCGACGCCGCCCTGAACGCCCTTGAAATGTCTCGATTAACCCTTTGGAACATGTACAACAACAACACACTTTATCCCGGCGTAGGACATCAGCCACCCCTCTCGCCGCAACCCCCGCATTCTCCTGCTCCTCCGACTAGCAGTCCGGAACCGCAAAGAGAAGCTCTCGACTTGGGTCTCAGGTCTTCGCCAATGTCGTCACCCCCGGCGAGAAATAGCCCCCCCTCGTCCGGTGGAGGTGTACAAGTGAAAAGAGAACAGGACATCGGGGGAATGACGGTAGGCCCTCCGCCAGCGAAGAGGCTACTCTCCGACGACGACAACAATTCAGATCCCAAAGGAGCTTCCTCGGGATTGTCCGGTGCTCACATAAAGATCTCCAACAGAGGGGACGGaagaaacggtgaaaattcgcTGGTCGTCAGCATGGAACTTAACGGAGTAATGTATCAAGGGGTTCTATTTGCGCAGACCGAAAGTACAACACATGGAACGACGACAAATAACAATACGAAAACATCGCGCGGTGTCGTAtcgtga
- Protein Sequence
- MEISDEFQDMGNPGGGVAMANISMNHHHHTPDSPMSHQEEDLSDPDLQDEESGEELPQQPLQGNGHTSASTTPIPSNAPTPLTHLNSLMNSHHPHFLAKLKMDVSISPESIIPSSSAPSYSDERVSSLLTGERSTNIGTRNGSTINQINASLSRQQQQQLQHQDMDVLSNKSGLEALQAAMGSGGFNLPFSFPPPAAFLAPPHHSQGQNFTTGGSNNAVTSSASSHSSESSQGSGRNGGESRCRTEDGHSQNNIGGNHQQQTSWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYGGGGGAGDSMVRGSPHTPSSLSLHAQMSPLSLVTAVAAGGQHHGQQSLVNGSAAHTPVSHHPHHPQHPQGLPLGQPLNSGPIPGLAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPSSTSPRDAALNALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQPPHSPAPPTSSPEPQREALDLGLRSSPMSSPPARNSPPSSGGGVQVKREQDIGGMTVGPPPAKRLLSDDDNNSDPKGASSGLSGAHIKISNRGDGRNGENSLVVSMELNGVMYQGVLFAQTESTTHGTTTNNNTKTSRGVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -