Basic Information

Insect: Athalia cordata
Gene Symbol: RREB1
Assembly: GCA_963932425.1
Location: OZ010625.1:48330126-48336855[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.078 6.5 7.5 0.0 2 23 51 72 50 72 0.95

2 15 0.0001 0.0084 16.5 0.4 2 23 88 109 87 109 0.95

3 15 1.9e-06 0.00016 22.0 1.3 1 23 115 138 115 138 0.98

4 15 0.017 1.4 9.5 0.3 1 23 219 243 219 243 0.95

5 15 0.42 35 5.2 6.1 2 23 249 271 249 272 0.96

6 15 0.06 5 7.8 0.1 1 23 461 483 461 483 0.96

7 15 3.1e-05 0.0025 18.2 0.3 1 23 492 514 492 514 0.98

8 15 0.00069 0.058 13.9 3.1 1 23 520 543 520 543 0.97

9 15 0.0021 0.18 12.4 2.0 1 23 933 956 933 956 0.95

10 15 0.00028 0.023 15.2 1.4 2 23 1238 1259 1237 1259 0.97

11 15 0.021 1.7 9.3 4.5 1 23 1265 1288 1265 1288 0.97

12 15 0.0039 0.32 11.6 1.5 1 23 1328 1352 1328 1352 0.96

13 15 0.9 75 4.1 2.2 1 23 1441 1464 1441 1464 0.91

14 15 0.01 0.84 10.3 0.4 2 23 1517 1538 1516 1538 0.94

15 15 0.0055 0.46 11.1 6.2 1 23 1544 1566 1544 1566 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.078	6.5	7.5	0.0	2	23	51	72	50	72	0.95
2	15	0.0001	0.0084	16.5	0.4	2	23	88	109	87	109	0.95
3	15	1.9e-06	0.00016	22.0	1.3	1	23	115	138	115	138	0.98
4	15	0.017	1.4	9.5	0.3	1	23	219	243	219	243	0.95
5	15	0.42	35	5.2	6.1	2	23	249	271	249	272	0.96
6	15	0.06	5	7.8	0.1	1	23	461	483	461	483	0.96
7	15	3.1e-05	0.0025	18.2	0.3	1	23	492	514	492	514	0.98
8	15	0.00069	0.058	13.9	3.1	1	23	520	543	520	543	0.97
9	15	0.0021	0.18	12.4	2.0	1	23	933	956	933	956	0.95
10	15	0.00028	0.023	15.2	1.4	2	23	1238	1259	1237	1259	0.97
11	15	0.021	1.7	9.3	4.5	1	23	1265	1288	1265	1288	0.97
12	15	0.0039	0.32	11.6	1.5	1	23	1328	1352	1328	1352	0.96
13	15	0.9	75	4.1	2.2	1	23	1441	1464	1441	1464	0.91
14	15	0.01	0.84	10.3	0.4	2	23	1517	1538	1516	1538	0.94
15	15	0.0055	0.46	11.1	6.2	1	23	1544	1566	1544	1566	0.98

Sequence Information

Coding Sequence: ATGGCCTGTCTCGCAGGTGCCATCGCCCCTGTGCTAGCCACCCCACGTTCAGTTACCACAGACTGCGGACTGGAGCAACGTCAGAATAGCGAGACGCAAACGGACGcacaatcatcatcatcatcggtTGACCAATCCTGCTCAGCCCTCGTTTGCCCAGCGTGTTCTTTAGTTCTACCAAATACGAGAGAACTTACGAATCACATACGAGATCACAACTCTCCTCGCAGTAGCGACGGAAGTGCAGCAGAGGACGAATGCTCTTGTCGTGTTTGCGGCAAGGTCCTCAGCTCGGCTAGTTCCTTGGACCGTCACATCTTGGTGCATTCTGGGGAGCGACCCTTCAAGTGCAGAGTCTGCGGACTAGCCTTCACTACCAACGGAAATATGCACCGGCACATCAGAACTGCCCACGGTGGCAGCTCGCCGAACAGCTGTACGGATTCTGACGGTAGTAGCGACTCTGAGAGACCCGTACCTAAGAGACGAAGACTGGAGGagttcaacaacaacaataacaacaataatgtagcaaaaagaaaatcacctGAGTGTGTTGAGGAATTGCAGGAGGGGCAACGGAAGCATAAGAGTTTGTTGAATAACAACTCGAGGAGTGAGATGAAGAATTCTCAGGTTGAGAGACAGAAGACCCACAGCTGCCCCGTATGCGGGAGACAGGACTTTGCGACGAACACCCTCCTCGAGGCGCACCTCGAACGCACTCACCCAAATTATCCGGCAAAATGCGACACCTGCAACCTAAACTTCAGCGATCATCGGGTGCTCAACCATCACCGTTCCATGGGTCACCATTCCGATCGTTCAATTGATAGCCCTACGAGAAACCTTCGAAATTCTGTAGTTGGATTTGAGGATCTTACCTTCGTAGATTTTTCATCTGGGAAATTTCCTGCCATTGCTCGGGCGGTTTGTGAAAAATCGCTTCATCGACCGGCTTCCGGAGAAGTTGCGAGATTTCAATGCTGCAAATGTCTTAGAGCATTTCCCTGTAGAACAGCTCTAGATTCACACGAAACCGATTGTGGCAATCATAACTCGCAGCCGAGAAACGCCGTTGACGATCAATCGACGAGAAACGACTTTTTTGCGGGTCTTGATCTCCAGAATAAAGCAGCTCTCGCCGAAGCTAAGGAGGGAAAGGATCTGGCAGACATCCAGAGTATCTTGTCGCGTACATCCGAACCGATTCTACAAAACTTCTCGCGATCTGATGCCAGTACTCCAGATAACGTGATCAAGATCGGATCGAGCATCGGATCTTCTGGATCTTCTGGAACTACCTCTGCAGAAACTCACGATGAAGAAGTTCAGGATGCATTTTCAGCAGAGTTCCGTCGCATGAAACTTCGCGGTGAATTTCCTTGCAGACTATGCACCGCCGTTTTTCCAAATCTTCGAGCTCTCAAGGGACACAATCGTGCGCACATGGGAGTCGGCCCGGGAACGCCGTACCCCTGTAATATGTGCCCTTACACAAGTACGGACAAAACTGCGCTGGTCAGGCATTTAAGATCACACAATGGTGACCGCCCATACGAATGTTCACTCTGTAATTATGCATTCACTACTAAAGCGAACTGTGAGCGGCACCTTAGAAATCGACATGCTAAGCTTACCCGGGAGGACGTAAAACGATCGATCATATATCACCCCAGCGAAGATCCACTGAATGACAGCGGAGAAGCCCCACCACGTGGAGTACGGGAAGATACCCGTAGGATTCTTGTGTATCCAACCGAACGTGATGAAATCGTTCAGCAAAGACCAAGTGCTGTGACCGAAGGAAAGTCCGAAATCAGGGTAATCGACGAGGCAAAACTTCGACAACCTGTGGATATAATCGCACGGCACACTCCTCAGCTGAATCCCTTTGACACGCCTGAGATATTTCATAGAACACCGCTTATCCCACCACTTGATATGATTCAGAGGTACTCGGAGGGACCAGCGATGATGGATATCGAGAAGCCGCAAGATTTGGTAGCAAAACCAAATTTCCCTAAAAACAGCGACGACCAGGACGACAACTCCTCGGACGAAAGTGTATCACTTCTAGTCAGCGAAGCCAAACCAGCAATGCACCAAAGACTTTCGGACGCTCCTATGGATCTAGGAACATCCGGCGGTCCAGAAAGCTCCGGCGAAGAAGCACCATTGGATTTATCCATGGATGCGTTAGACCTCAGTAAAAAGTCTAAGGTGAACGAGATCGAACCAGCAAACACCGTTACAAACGATGATGCCCACGTCACCGAGAAAGAGCTCTACAATACTACCAATCACCTACTCCTGACGCAAGCTTTGCTTAAGGGTGGACATAACCCTCAGTCCACTTCGTTGGAGGCGATCTGCCGGAATGCTTCCCTCCTTTATCAAAACTTTGGAAACTTTTCCGGTAGTATCGGGGCTGGTCTGATACAGCCGTATCTGTTCAATCCGCATTTGTTTAACCAAGAATTCCTTATGAAAAATAGACTGCAAAAAGAACTCTTCAGAAGTTTACACAGCAGTGGTGGTAGCCTAGTAGAGCCTCAAATACCTAGAACTGAGTTCAGTTCACCTTTCACACAAAGTAAAGATGCTTCGTGCAACTCGGCCAGCGAAGATGCTGATTATTCTCCGAAGCTCATGTCCCCCAAATTGTCGACCAAGCTCTCAAGCTCtagagaaaaaatcgaaaactcaCCGTCGTCAAATTCCGTTAAGATGGTCATCAAAAATGGAGTGCTCATGccgaaacaaaaacaaagaaggtATAGAACGGAACGACCTTTTGCCTGCGAACATTGCTCGGCAAGGTTCACCCTTAGAAGCAACATGGAAAGGCATGTCAAGCAACAACATCCTCAACATTGGAGTCAGAGACAACGTGGTGGACATTCGACCAGAGGACGACCACCAGCTAATCCGCCAACGCTGCTACAAAGTTTAAACCAACCGGTGTCGCAATCGATGTCGCAACactattcaaatattttgccAAAAATAGACCATACCAGCTCTACGCAAGGTTATGGTAAACATTCAATCTCTGATCAGGTCAAGTACGCAATTCTAGCTCAGCAACTAAAGGGCAATAAACCCGATGATAATGACTCTGAAGAAGAATTGGTTATTGATGAGGAACCCCTAGATGAAGAAACTTCGGAATCTCGAGCGCAAAATGATGAACAGCGGCCGTTGAGTTTACTCAGAGGAAAACTAGAAAATCGTTGCGATTTCACAAAGGAAAATATCATGAAACAACACGTGAATGATTTCTCAAAAGATTACTTGATACAGCTGCAAGAGCAGCATCTTGCGAGGCTAAAGCGATACGaggattcgaaaaattatggGGAAAACGCAGATGATAGATCGGAAAAAGACGACAAAGACGAACCGGATGAGGATCTCTcggaggaacaaaaaaagttagaTCCTGAAGACcaggacgacgacgaagaagaaatagagaaaggaGAGGACGGCGTTGTCGATCTTGCAAGCGTTCCCAGGTTATTAGATAATGCCTCGCGGCAGTACCAACAATTTCAGCCACAGTACCTGAGCGATGAAGAGGAGGGTCTGATTGCATCGACGAGCGAAGGAAACAATTCAGGAAGTGATGAGAAATCGGATTCCGGAAACTCTGAGTCCATCACCGGGAAAAAGAAGTCTGCATACTCCCTGGCACCGAACAGAGTATCGTGTCCGTACTGCCACAGAAAATTCCCGTGGACGTCTTCCCTGAGGAGACATATTTTGACGCACACAGGTCAAAAACCATACAAATGCACCTACTGCCCACTGCTATTCACAACCAAGTCAAACTGCGATCGTCATTTATTACGAAAACATATAAACGCCGGTACCAGTAGTCAGTCGCTATCCGCCGGAGCATCGTCTTCGCCTGAAAGCCCTAGCACTTTGGCGAACAGCAACGCTTTCGCTATGAGAAACGTCCCAGAGAGACCTTACAAGTGCAACCAATGTCCGAGTtcgactttctcgactttGGGAAACCTGAAAAAGCATCTTTCATCTAAACATACAACTTGCGGACCGAGTTCTAGGTCGCATAGCCCACTAAGCGAACCCCAGAATAGCCCGAATGAATCTTTAAAACAGAATGATCAGAGTGGTTATGAAAGTCCTTCTTCGAGCGTAGAAGAACCCGTCCGAACGTCACCGACGATCCCTGAAGACAATATCAAGGTAACTCCTAACACCTCGACTAGCACCGAAACACCCCAATCCTTGAAGACCTCTCCGGAGTGCGGATCAACCGTTTCCTCGTGCTCTTCTGAATTGCCCTTCAAGTGTCACCTCTGTGACGGCAGCTTTGCTGAAAGACAGGACTGCCTCGAGCACATTAAACTCGACCACAGGTCAGAGTATGAACTCCTTTTAGTCAAAGGTGCTTTAGATATGGCGGCCGAAACCGAAACCCACCCTGAGGAGCAACAACAGCATTCCCAACAGCACTGTGACGATGGAGAAGGCCAGCGCGGCAAGTTCCCTGATTACGCTAATAGAAAGGTGGTTTGCGCTTTCTGTATGCGCCGTTTTTGGTCTGCTGAGGATCTCCGGCGGCATATGCGTACTCATACAGGAGAAAGACCTTTTACGTGCGACATTTGTCGCCGAAAATTCACACTCAAGCATAGCATGCTACGACATCGCAAAAAGCATGGCTCTGTCGGTTCTTCGATATACACAGGAACCAGTGGGGATGAAGAGGCTTCCCCAACGTcatcgatgaataataataacaataacaacaacaacaataacacaGTAAAAACTCAAGAGATGACGTCGACCCCTACATCGGTACCGGGAGACGCTACTCCCGTCCGATTTAGCACGcacgaaaaattatcaagcCTTTCTGGTAAGCTGGCAAACCTtcaaaataacaacaataacaacgtAGAAGGTGCTGATCAAGGGAATGATCTGATTTCAAATCTATTGGGAATCAGAGACAGAACCATTATCGACAAAGTTCTACAATCTACGCCTGATGACGCGGCCAAACTACTCGGTATACCCTAG
Protein Sequence: MACLAGAIAPVLATPRSVTTDCGLEQRQNSETQTDAQSSSSSVDQSCSALVCPACSLVLPNTRELTNHIRDHNSPRSSDGSAAEDECSCRVCGKVLSSASSLDRHILVHSGERPFKCRVCGLAFTTNGNMHRHIRTAHGGSSPNSCTDSDGSSDSERPVPKRRRLEEFNNNNNNNNVAKRKSPECVEELQEGQRKHKSLLNNNSRSEMKNSQVERQKTHSCPVCGRQDFATNTLLEAHLERTHPNYPAKCDTCNLNFSDHRVLNHHRSMGHHSDRSIDSPTRNLRNSVVGFEDLTFVDFSSGKFPAIARAVCEKSLHRPASGEVARFQCCKCLRAFPCRTALDSHETDCGNHNSQPRNAVDDQSTRNDFFAGLDLQNKAALAEAKEGKDLADIQSILSRTSEPILQNFSRSDASTPDNVIKIGSSIGSSGSSGTTSAETHDEEVQDAFSAEFRRMKLRGEFPCRLCTAVFPNLRALKGHNRAHMGVGPGTPYPCNMCPYTSTDKTALVRHLRSHNGDRPYECSLCNYAFTTKANCERHLRNRHAKLTREDVKRSIIYHPSEDPLNDSGEAPPRGVREDTRRILVYPTERDEIVQQRPSAVTEGKSEIRVIDEAKLRQPVDIIARHTPQLNPFDTPEIFHRTPLIPPLDMIQRYSEGPAMMDIEKPQDLVAKPNFPKNSDDQDDNSSDESVSLLVSEAKPAMHQRLSDAPMDLGTSGGPESSGEEAPLDLSMDALDLSKKSKVNEIEPANTVTNDDAHVTEKELYNTTNHLLLTQALLKGGHNPQSTSLEAICRNASLLYQNFGNFSGSIGAGLIQPYLFNPHLFNQEFLMKNRLQKELFRSLHSSGGSLVEPQIPRTEFSSPFTQSKDASCNSASEDADYSPKLMSPKLSTKLSSSREKIENSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQHWSQRQRGGHSTRGRPPANPPTLLQSLNQPVSQSMSQHYSNILPKIDHTSSTQGYGKHSISDQVKYAILAQQLKGNKPDDNDSEEELVIDEEPLDEETSESRAQNDEQRPLSLLRGKLENRCDFTKENIMKQHVNDFSKDYLIQLQEQHLARLKRYEDSKNYGENADDRSEKDDKDEPDEDLSEEQKKLDPEDQDDDEEEIEKGEDGVVDLASVPRLLDNASRQYQQFQPQYLSDEEEGLIASTSEGNNSGSDEKSDSGNSESITGKKKSAYSLAPNRVSCPYCHRKFPWTSSLRRHILTHTGQKPYKCTYCPLLFTTKSNCDRHLLRKHINAGTSSQSLSAGASSSPESPSTLANSNAFAMRNVPERPYKCNQCPSSTFSTLGNLKKHLSSKHTTCGPSSRSHSPLSEPQNSPNESLKQNDQSGYESPSSSVEEPVRTSPTIPEDNIKVTPNTSTSTETPQSLKTSPECGSTVSSCSSELPFKCHLCDGSFAERQDCLEHIKLDHRSEYELLLVKGALDMAAETETHPEEQQQHSQQHCDDGEGQRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFTCDICRRKFTLKHSMLRHRKKHGSVGSSIYTGTSGDEEASPTSSMNNNNNNNNNNNTVKTQEMTSTPTSVPGDATPVRFSTHEKLSSLSGKLANLQNNNNNNVEGADQGNDLISNLLGIRDRTIIDKVLQSTPDDAAKLLGIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00939029;
90% Identity: iTF_00174544;
80% Identity: -