Basic Information

Insect: Athalia cordata
Gene Symbol: -
Assembly: GCA_963932425.1
Location: OZ010626.1:22101379-22108726[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.16 14 6.4 5.3 1 23 402 424 402 424 0.98

2 19 0.096 8 7.2 1.3 1 23 430 453 430 453 0.95

3 19 0.0034 0.28 11.7 0.4 1 19 459 477 459 481 0.91

4 19 0.0032 0.26 11.8 3.6 1 23 487 509 487 509 0.98

5 19 0.016 1.3 9.6 0.1 3 23 517 538 515 538 0.94

6 19 0.19 16 6.2 3.3 1 23 545 568 545 568 0.97

7 19 7.7e-05 0.0064 16.9 1.9 1 23 572 594 572 594 0.96

8 19 0.02 1.7 9.3 1.1 1 23 600 622 600 622 0.98

9 19 7.3e-05 0.0061 17.0 2.2 1 23 628 650 628 650 0.96

10 19 0.00025 0.021 15.3 0.2 1 17 655 671 655 672 0.93

11 19 0.079 6.6 7.4 1.7 1 15 1051 1065 1051 1070 0.81

12 19 3e-05 0.0025 18.2 0.1 1 23 1108 1130 1108 1130 0.98

13 19 0.56 46 4.8 0.8 1 23 1136 1158 1136 1158 0.95

14 19 0.0017 0.14 12.7 2.0 2 23 1165 1186 1164 1186 0.96

15 19 4.2 3.5e+02 2.0 3.8 2 23 1193 1215 1192 1215 0.89

16 19 0.00013 0.011 16.2 0.3 1 23 1219 1241 1219 1241 0.97

17 19 0.0013 0.11 13.1 2.3 1 23 1246 1268 1246 1268 0.98

18 19 2.7e-06 0.00023 21.5 0.8 1 23 1274 1296 1274 1296 0.98

19 19 0.00017 0.014 15.8 0.4 1 21 1301 1321 1301 1322 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.16	14	6.4	5.3	1	23	402	424	402	424	0.98
2	19	0.096	8	7.2	1.3	1	23	430	453	430	453	0.95
3	19	0.0034	0.28	11.7	0.4	1	19	459	477	459	481	0.91
4	19	0.0032	0.26	11.8	3.6	1	23	487	509	487	509	0.98
5	19	0.016	1.3	9.6	0.1	3	23	517	538	515	538	0.94
6	19	0.19	16	6.2	3.3	1	23	545	568	545	568	0.97
7	19	7.7e-05	0.0064	16.9	1.9	1	23	572	594	572	594	0.96
8	19	0.02	1.7	9.3	1.1	1	23	600	622	600	622	0.98
9	19	7.3e-05	0.0061	17.0	2.2	1	23	628	650	628	650	0.96
10	19	0.00025	0.021	15.3	0.2	1	17	655	671	655	672	0.93
11	19	0.079	6.6	7.4	1.7	1	15	1051	1065	1051	1070	0.81
12	19	3e-05	0.0025	18.2	0.1	1	23	1108	1130	1108	1130	0.98
13	19	0.56	46	4.8	0.8	1	23	1136	1158	1136	1158	0.95
14	19	0.0017	0.14	12.7	2.0	2	23	1165	1186	1164	1186	0.96
15	19	4.2	3.5e+02	2.0	3.8	2	23	1193	1215	1192	1215	0.89
16	19	0.00013	0.011	16.2	0.3	1	23	1219	1241	1219	1241	0.97
17	19	0.0013	0.11	13.1	2.3	1	23	1246	1268	1246	1268	0.98
18	19	2.7e-06	0.00023	21.5	0.8	1	23	1274	1296	1274	1296	0.98
19	19	0.00017	0.014	15.8	0.4	1	21	1301	1321	1301	1322	0.95

Sequence Information

Coding Sequence: ATGGCGTTAGAAGAGGAAGCCCAGATTTGTAGGCTCTGCGGGCAGTGCGAGAGCATTTACATTGATGTCTTCGGAGAAGAGGGAACGAAGAGATATCTGAGCCTAAAAATTCATACGAAAGTCAACATTTTGATAGATGAGAGGGACCCGCTGCCCAAGGCGATCTGCGTACAGTGCCTGGGCAAGCTGGAATTCGTTTGCGATTTTCAGGAGGAATGCCTTCGCACCCAACAACTGTTGCGCGATCGTTTCAATTGGCCATCTCCCAGTGACATTGACGAAATCAAAGTTGAAGATACTCCGGTTTCCTCAGTAAACAACAATAATACCAACCAAAATCAGAACCCTCCGGACATTGTCATTAGCGATGCTGACGACATTGATTGTTTCAAAGAAGAAGAGCAGAGTTCATCTTGGAACGGTGCACCTCCCGCAACCAAGGAAGCTCCAAGAATTTTGGTTGATGTGAAACGAGTGGAACCGTTGACTAGAAACATACCAGTTGAACATTACACCGTCAATACTGTCACTGGAAATGCGGTGCAATCCCCAACAGCCTCAACTCCGTTAGATATTTTACCAAACGACGACGTATCGAGTAATCAAATTTCTTCCACAAAGAATGTCTTACCTGAGTTTGACATCAATGAAATCTGTCGCAGTGTTCCAATTGCTAATAGGTTAAGAAGTCAAGGAAACAATAGCGAAAGCAATTCTTCTGTGAAATGTCATACCTTAGACAGGCCTTGTTTTCTCCGAGAAAATGACAATATGATACAAATACCAACATCGGCTCTAAACAAGGTTCTAACTACTATTGCCAATTTCGACAATACGCAAGTCACAGTCAAGGAATCTACTAGTGTGAACGATGCCAACGAGGatttaaatttcatcgttGAGCttcgtcgtaaaaaaaatgcagagcTGGTTACCATTCTGGCTAAAGTGTTTCCTGATCAAGGATCATGTATAGTGGATCGTGGGGCAATTGTAAAGCTcttagaaaatcaaaatgactCTGAGATGCAAGCGATCGTTGCCAAAGTCTTGGGTCAGTCCAACTCCGATGTGGCTGACATTGACAACGATGAGACAAAAGTGGTTGTCGGACGGAATCCCGAGGACCTTTTCCGCATGGACGGAGAAGAAATAAGCGTTGAGGAGAACATAGAACACGTGATCGTTGAGAACCGTACCCGCTACATTTGTAGACTCTGTCGAAAGAAGTATAGTCGGAAGGACAAATGCACCGTGCATGTCAAAACCCACCTGGGTATAAAGCAATATCTCTGTACTCTCTGCCCCGCAAAGTTCGTGTGCAAATCGGACGTACTCAAGCACATAAGGTCAACACACACGAACCCTAGGCCGTTCCAGTGTCCAAAGTGTCCGAGAAGGTTGCGTTCAAAATTTGACCTTATCGAACACGACAATGTTCACGAGGGTATAAAGCCTTATTCGTGCAGCGAATGCGGGCTGAGATATCATCACAAAGTATCCCTGCAAATGCATGCCAAGTCTCACCTGCCCTCGCAGAATCTTGCATGCGAATACTGTGGCAACGTTTTTCCATTCCGAACGAGACTTTTAAGCCATATAGCTAGTGTTCACATGAAAAACAGGCGCAATTTCCGTTGCCACTTCTGCTATAACTTATACTCCAGTCTATCAGTACTCAATAACCACATAAAATCTAGCCATGCTGCTACACATGTGTGCGAAATATGCGGTAAGGAATTCAAGGTTAAATCGAAATACAAAACTCATGTCCTCCAGCACGAAAATCCAAGACCATTCAGCTGTCCTGTTTGTAAGAACAAGTATGCCTCGCGGACTTTTTTGAGCGAGCATCTGTCCAAGCATCAGGGGATCCGTAAACACATATGTCAGAAATGTGGAGCCACTTTTGCTCAGGCGAGCCATTTGGCTGCGCATCGACATGTTCACGGTGAAAAGAAGTACTCGTGCCCCGATTGTGGGCGGAGATTCAACAGGCAAGACAATATGAAGATCAGGGAAAACGACGGGCTATCGAGGAAGATATGCATGCGATGTATAGGCACTCTCGAATTTGTAACTGATTTTCATAACAAGTGCCACCAGACACAACACCAACTTTTGATAGCTAAGGAGCGTTCTCGAAAAATTGCCAATGTTGACATCGATGCAGAGTCCGACAAAGAGAACACCTTGCCAGCTGACCCACTATTGCAGATTGGGCACACGACAACAGGGATCACTGATTCTACCGTAAGAGCGATCGATTCTGCAGAGTACGGTGCCTCAGACTATTTCCGTGATTGCCAGGGGGTCGCAAAGTATGGAACTATCTGGACAGAAAGTAAAAGTACCAAACGCAAAAAATCTGGGTCAGTTATTGGTGCATCGGAGCCAAAAAGTCTGCGCAGTAAAGAAGCTACTCCAAGTTGGGAATGTAATACCGCCATACTTCGAAATCACAAGCTCCCAGAAACAAGGGCCCAAAAAGAGAGCGTTAATGGAAACGAGCAGTCCAAGCCCCTCACTAGTTGTCTCAAAACGAGAAAACGAGTGCCAAAAAAAACCGAGAGTGCTAGAAGAAACTGCAGGAAAGCACCCCTGTCCAACTCGCGAGACACCAAAGTTGGCAACAGGATTGTAGATGATAATTTTGACGACttgtttgaaatgaaaacagCACCTACGGACGCTAAGAAATCGGCGCTGGTACCTTTAGAAAATGTTCTTGCGCCAACGTCGAAAGAATTAACGCAAAATTTCGGCGCTCAACCGACTACCAAGAATCTACAGACAGGTGAGAACGCCGACAAAATGCAAGTCAAGGAAGGTCAAGTATTCGAGGGATGGTTAGAGAACAAGCCTGTTGGCGATGAGTTAAATATCATAGGCGCATCACAAGGTTACCTCAAAACGACAGAGGCACCCGAACACCtggttttattttccaaagaaTTGAGCGAAAATGTTGAGCCGAATGTTGCACATTTTCGTGAACGACGTAAGAAATCGGAGGGCCAATTTGGAAAGCTGTCCGAACTAATAACTAACGATCAAAAGAAGATCATAGAAACTCTATACACTATAAACATGGATGTGGTTGACGATGCAGAAGTCTACCGGAATATAACGATTTTGGATAAACTAAAATTCAAGTGTAAACTATGCGGAAAAACTTACCCGAGAATGGATAAATGCCAGGTTCATGTATGGGGCCATTTAAACATGAAGCCGTATAGCTGCAAGTCGTGTGACTTTGTTACGCTTACAATAAGCAACATCCGCTGTCACATTAGGAAACGCCACTTGAAGATTAAACCGTTCCAATGCAATCTCTGCGAAAAAACTTACGCTACCGCAGTGCTGCTGGAGGAACACATAAATTCTCATACAGGTGCAAAGCCTTACTTATGTAAACTTTGCGACTTTGCCACTGCCAACAGGCAGGTGCTCAGTTATCACAGAACCACCCACAAACCCGCGAAAGATATCTCGTGCGAGGTGTGCGgcaaaaaattcttctcaaaTTGTAGAATGCGGGCACACATGGTTACCCACAACAAAGATAAAGCTCTCAAGTGCAAACTTTGCTCCACGTATTTGTGTAATGCCGAGGCACTCGAGAAGCACTGTCAGAAAGTTCACGCGCGCGACTACATCTGCAATATTTGCGGGTTACGGACTAAATCGAAAAAAGCTCTAACGAACCACGAGAATGTACATTCAGCAGCCAAGTACAGATGTCCCCTCTGTTCCAACGCATACAAGAGCCGACACATGTTGAAGGAGCACCTTCTTAAACACCAAGGGATCCGAAAGTACAAATGTGAATTGTGTCAGAAGTCTTTTGCCCAGCAGTCCCACATCGCCGCACACATGAGCGTGCACATGGGGAAAAGATACCCATGTCCGGGTTGCAATAAGCTATTCAACAGGCGAGACAACATGAGGATGCACACGAAACGCTGTGAACTTTTCAAATCTAATCCGGattgtaagaattttttttccgaccaAAGTTCGGCCCGTCCGCTCGTAGAAGACGATCGATTAGCCGCAGTAACGGTTACCGACTCATCTAGCGCACCGGAAGCAACGAAATCGACAGAGAATTCGAAGACTGatatagagaaacaaaaaaacgagtcAGGGTCAAAACCGACCGATTTGTTGAGAAGTAAGACTGATGATTCTAGTGATTCACCTAATTTAAAGGAGGATTTATTGCGCGAGGATTATTTCGTTCCATTCAGAAGCGATGACGATGGAATCCTCCAATTCGGAGGGGTGGAAATCTTTCCACTCTCTAATCCCGTTGCGAGTAATCTTCAGAGCGAAGGTACCATAGCTATTACCGAGAATGTACTCAGACCCGAGTGTTTGTAG
Protein Sequence: MALEEEAQICRLCGQCESIYIDVFGEEGTKRYLSLKIHTKVNILIDERDPLPKAICVQCLGKLEFVCDFQEECLRTQQLLRDRFNWPSPSDIDEIKVEDTPVSSVNNNNTNQNQNPPDIVISDADDIDCFKEEEQSSSWNGAPPATKEAPRILVDVKRVEPLTRNIPVEHYTVNTVTGNAVQSPTASTPLDILPNDDVSSNQISSTKNVLPEFDINEICRSVPIANRLRSQGNNSESNSSVKCHTLDRPCFLRENDNMIQIPTSALNKVLTTIANFDNTQVTVKESTSVNDANEDLNFIVELRRKKNAELVTILAKVFPDQGSCIVDRGAIVKLLENQNDSEMQAIVAKVLGQSNSDVADIDNDETKVVVGRNPEDLFRMDGEEISVEENIEHVIVENRTRYICRLCRKKYSRKDKCTVHVKTHLGIKQYLCTLCPAKFVCKSDVLKHIRSTHTNPRPFQCPKCPRRLRSKFDLIEHDNVHEGIKPYSCSECGLRYHHKVSLQMHAKSHLPSQNLACEYCGNVFPFRTRLLSHIASVHMKNRRNFRCHFCYNLYSSLSVLNNHIKSSHAATHVCEICGKEFKVKSKYKTHVLQHENPRPFSCPVCKNKYASRTFLSEHLSKHQGIRKHICQKCGATFAQASHLAAHRHVHGEKKYSCPDCGRRFNRQDNMKIRENDGLSRKICMRCIGTLEFVTDFHNKCHQTQHQLLIAKERSRKIANVDIDAESDKENTLPADPLLQIGHTTTGITDSTVRAIDSAEYGASDYFRDCQGVAKYGTIWTESKSTKRKKSGSVIGASEPKSLRSKEATPSWECNTAILRNHKLPETRAQKESVNGNEQSKPLTSCLKTRKRVPKKTESARRNCRKAPLSNSRDTKVGNRIVDDNFDDLFEMKTAPTDAKKSALVPLENVLAPTSKELTQNFGAQPTTKNLQTGENADKMQVKEGQVFEGWLENKPVGDELNIIGASQGYLKTTEAPEHLVLFSKELSENVEPNVAHFRERRKKSEGQFGKLSELITNDQKKIIETLYTINMDVVDDAEVYRNITILDKLKFKCKLCGKTYPRMDKCQVHVWGHLNMKPYSCKSCDFVTLTISNIRCHIRKRHLKIKPFQCNLCEKTYATAVLLEEHINSHTGAKPYLCKLCDFATANRQVLSYHRTTHKPAKDISCEVCGKKFFSNCRMRAHMVTHNKDKALKCKLCSTYLCNAEALEKHCQKVHARDYICNICGLRTKSKKALTNHENVHSAAKYRCPLCSNAYKSRHMLKEHLLKHQGIRKYKCELCQKSFAQQSHIAAHMSVHMGKRYPCPGCNKLFNRRDNMRMHTKRCELFKSNPDCKNFFSDQSSARPLVEDDRLAAVTVTDSSSAPEATKSTENSKTDIEKQKNESGSKPTDLLRSKTDDSSDSPNLKEDLLREDYFVPFRSDDDGILQFGGVEIFPLSNPVASNLQSEGTIAITENVLRPECL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00174510;
90% Identity: iTF_00174510;
80% Identity: -