Acor006253.1
Basic Information
- Insect
- Athalia cordata
- Gene Symbol
- Snapc4
- Assembly
- GCA_963932425.1
- Location
- OZ010626.1:5290735-5293524[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.18 2e+02 2.2 0.1 14 43 252 286 244 289 0.81 2 5 1.4e-11 1.5e-08 34.6 0.7 1 44 295 340 295 342 0.94 3 5 1.1e-06 0.0012 18.9 0.2 3 43 352 396 350 399 0.93 4 5 5.7e-12 6.1e-09 35.9 0.0 1 45 405 450 405 451 0.94 5 5 2.8e-12 3e-09 36.9 0.0 4 42 458 496 456 500 0.97
Sequence Information
- Coding Sequence
- atgagtGACTCTGAAGACAATGACGTGCTCCTTGAAGATATTAAAGCTTTGGAGGCAGCATTAAATCAAAAGACTCCTGTctctgtgaaaaatgaagtaaacgAAGATCTGCATCACAGCGTAGAACATAACCAACATATACAGCTGACATCGCAGACTGAAAGTAATTATTGTACGTCAACATTGACTGTCGATACCGACAAGGACCCGCTTGGGGACGATGAAGAAAGTGTCAGTGATTCCAGTGATAACGACGATGAAGTAGATTTATTAGATCCGGAGACTccattgaatttgaataaaaagataataaacCTTCTACTAAAGGCCCAGAAAAAACTCCGTCTCCTTCTCGACGAGTGTAAGAAACGCCAGGAACTCATCGATGAACGCATACGTCAAAGGACAGTGTGCCCAGTTCCTCGCCTAATGTTAACAATCGTTGGGATGCCTTATTTCAAAGACAAAAGATACTTCCCAGCACCAAAGAACCAGGATGCCAAAACCAAAGCTCAACGTGGAGAGCTGCAAATTGTTGAATTATCATCTCCTTTGCGATGGACTCTGAGAGATCGGAATATGTTGTGGGATGCAATTTATACAAATGCCAAAGTACTAAGAGCCGAGGAATTAAAGAAGAAGACGGGTGCTGATGATCAGCAAACACATCCAATGGATACTGAAGATCCTTTGCTAATAGATCATGacaaaagtaataaaaatacgtCCACGGAAACGCTTGAGCATCTCAGATGGTTAGTTAGGCGTCTGGGATCCGAGCGACTTGATTGGATGAAAATAGCAGCTACTGATTTTAATAACCGACATTCAGCTGCTGAATGCCAAGCGATGTGGAATGTCTTTTTACATcctgatataaataaatgtaaatggAAAAAGCAAGAAGATATTAAATTGAAAGAGTTGgcaaaaaagtataaatatgaaaattgggATGTGATTGCCACTAACTTGGGTACAAAACGTAGCGGGTATCAATGTTTTATCAGATTTAATTCAAACTTCAGAAATACCATGCCTAAGAAATCCAGTGTCTGGTCAAAggaagaggatgaaaaattaattgaaatagtAAATGCCCGGAGAATTGGAAACGTTATACCTTGGGGAGAAGTCACAAAAGCCTTTGCTAACAGAAGAAAACAGCAAGTTTACATGCGCTGGATTTACAGTCTTGACCCAAACTTGAAAAAAGGTAGATTCAGTAAAGAAGAAGACCAACTGTTGTTGCAaggtgttgaaaaatatggCTTAAATTTTACAAAGATTGCAATATGCCTAATGCCTCATAGAACTACAGCGCAATTAAACGATCATTACAGAACTCTTatgaaagagaaacagaaCTTTTGGACTTATGCAGATGATTCAAAATTGGTTCAACTCTTTGAAAAGGTAGGCAATAACTGGTCTTTAATTTCTAAACAATTCGTAAATAAGACAAGAGTTCAACTCAGACATCGTTATAGTGCAATTCTTCGATATTTACGTCGAGGATTTAACTTAAGCAATATGCCTAGAGGCAGACAGCTGATAAGTCGTTTGACACCTGAAGAAATGTTAGAACATGGGAAAGACAGGCTCAACGAAATGTCTaaattgataagaaaaaaccaaagtcATTTATCTGGAGTTGATATTCAACTGAAGAATTATTTCAAAGGAGTATATCCAGTGGCAGCAAAACGtggaagaatcaaaaaattttacacaacCGAGGAACTTCAAGCAGCAACAGAAAAACTGTATGTACTTCTAAAAATACTGAATGCTGATATACAAATTCCGGAAAACTTAGAAACTCAATCAAACCTGACTGAAAAAGATAAGCAACTGCTGGTTTCTTTAAAAGAATACTCTGCAACAATGGCAAATTTAGAGACTTCTTCACAACCAAAATTGATTGAGGATGTTAGGAAAAAGATGTTTGGCTCAGCAACTTTGCAGTCAAATAAAGAACATTTTATCCCACCGTTACCATTCTCGGGAGTGTTCCGAAAATCCAAACTTGATGCATCCAAGCATGTTGGAATAGATTACTTACACGAAGGGAACAGATATCTCCTTGAATTGGACAGAGTTATTGAAACACCTGAATCGATTATATCTGCGATTGGTGGCTGCGACCAGGAAATGGAATTTCAaaagatgttaaaaaaatatatccaccaAACTAAAGAGTCTTCAGAGAATACTGCGCTTGATagtaaattttctcaaattatgaTACCGTTGACTAACGATCCAGGCAACACAACATATATAAACTACCCAAGTACTTCAAATATAGTTGATACTAAACAGCCCAGCACTAAAGAGCAGATACATAAGTCAAACACAAGTCAAGGAGATGAAGTCATTTGCAGAAAGCTGACAAAATATTATCCAGAAAGACTCATACCACCTAATTATCTGACTCTTTTGGGTTTTCGTGGCATACTTTTAGCTAAACATACTCTTGAAAGAGATGAGGATAGAATAGTAGACCAATATCAATACGAAGAATCAACAATGACGCCTGAAGGTGAAAAGGCCTTGGAGTTGTTTGAAGAACGCTtcataaaacttttcaaatttccgaTAGAGTTTTCTGAAGTAGTGCCTCCCCTGTTACACAAAGACGATGATATGCGCATAGATGATACTAGAAATGCAAGTGTTAATTctcgaacgaaacgaaaacgAGATAGTCGGAACTCTGATGCAGATACAGAATGTAAAAGCAAAACAAAACGGGAAAAAGTGATTGAAGGAACTTCTGAAACATGA
- Protein Sequence
- MSDSEDNDVLLEDIKALEAALNQKTPVSVKNEVNEDLHHSVEHNQHIQLTSQTESNYCTSTLTVDTDKDPLGDDEESVSDSSDNDDEVDLLDPETPLNLNKKIINLLLKAQKKLRLLLDECKKRQELIDERIRQRTVCPVPRLMLTIVGMPYFKDKRYFPAPKNQDAKTKAQRGELQIVELSSPLRWTLRDRNMLWDAIYTNAKVLRAEELKKKTGADDQQTHPMDTEDPLLIDHDKSNKNTSTETLEHLRWLVRRLGSERLDWMKIAATDFNNRHSAAECQAMWNVFLHPDINKCKWKKQEDIKLKELAKKYKYENWDVIATNLGTKRSGYQCFIRFNSNFRNTMPKKSSVWSKEEDEKLIEIVNARRIGNVIPWGEVTKAFANRRKQQVYMRWIYSLDPNLKKGRFSKEEDQLLLQGVEKYGLNFTKIAICLMPHRTTAQLNDHYRTLMKEKQNFWTYADDSKLVQLFEKVGNNWSLISKQFVNKTRVQLRHRYSAILRYLRRGFNLSNMPRGRQLISRLTPEEMLEHGKDRLNEMSKLIRKNQSHLSGVDIQLKNYFKGVYPVAAKRGRIKKFYTTEELQAATEKLYVLLKILNADIQIPENLETQSNLTEKDKQLLVSLKEYSATMANLETSSQPKLIEDVRKKMFGSATLQSNKEHFIPPLPFSGVFRKSKLDASKHVGIDYLHEGNRYLLELDRVIETPESIISAIGGCDQEMEFQKMLKKYIHQTKESSENTALDSKFSQIMIPLTNDPGNTTYINYPSTSNIVDTKQPSTKEQIHKSNTSQGDEVICRKLTKYYPERLIPPNYLTLLGFRGILLAKHTLERDEDRIVDQYQYEESTMTPEGEKALELFEERFIKLFKFPIEFSEVVPPLLHKDDDMRIDDTRNASVNSRTKRKRDSRNSDADTECKSKTKREKVIEGTSET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00174107;
- 90% Identity
- iTF_00174107;
- 80% Identity
- -