Acor000462.1
Basic Information
- Insect
- Athalia cordata
- Gene Symbol
- bab2
- Assembly
- GCA_963932425.1
- Location
- OZ010625.1:4398933-4400630[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-08 9.6e-05 22.0 0.1 1 39 282 320 282 333 0.92
Sequence Information
- Coding Sequence
- ATGGAATCTGGAAACAATTTACCCACTGCCGGTAATTATCCTGGTGGTGATCGTCAGCAATTTTGCGTTTCATGGAATTCTCATCAATCTAATATGCACAATGCATTTCCAAAATTGTTGAGCTCCGAACAATTTGTTGATGTCACATTGGCTTGTGACGGCGGCTCCATAAAGTGCCACAAGGTGGTACTGTCTGCCTGTAGCGATTATCTGGAACGTTTGTTACTGGATATTCCTTGCACTCATCCAATTATTTTCCTGAGGGATATGAGAATGTGGGAACTCCAGGCTCTCGTCGAATTTATGTACCGAGGAGAAGTTTACGTCGAACAACAGCAGTTGGCAAAATTAATGCAGGCTGCCGTGGCTCTACAGGTTCGTGGTCTATCGAATCAAGGAAAAGACAATACCGACTCGAATGCTGAATCCATTTCCCAACAACCAAGCACCCCGACAACGCCAACGACACCAACGAAACAAGATCTGTCACTGgatataaaaagagaagacgCGTCTATAATTGATGAAACTAATGAAAGCTTCCTCGAGTGCACGCCGAGCATCGGATCACCAACAACTACTCCTTCCACTATTCCAACCGCGGCTCAAAATACTCAAAATTCAGCTAGCATGGAACACACCGAAGCTCTGCAGCATCTCGAGAAGGCATTGAGTGCTTGCGAAGCTACGCTCACCGAGACACCGGGGCTTGTTAAAATGGAACCGGATGAACAATTTAATCAGGATCCTAAACCGTACACTATTAGTATGGCCCGCAGCACAAATTGTACCCCGGGAAGTCCATTTCCAGCTATAGAAGGTTACCAAAGACGACAGCGCCGTTCGGAAGAAGAGTTAAAACAAGCCTCGGATATGGTTACTCGTGGTATGACGTTCCAAGTTGCATCAGAAAAGTATAACATCCCGATAAGCACAATTCGTTTCTACATGGTACGCAAGGGAATCTTACAGAGGAGAAAACGAGGACGTGgatcgaacaatctcggtcTAAACAGCCAACCAGGTAGCCCTGCCAGCCCACCTTTTCACATGATGAATTATCGATTGCCAGAGAGCCTGAATACTAGTTTACCGTAG
- Protein Sequence
- MESGNNLPTAGNYPGGDRQQFCVSWNSHQSNMHNAFPKLLSSEQFVDVTLACDGGSIKCHKVVLSACSDYLERLLLDIPCTHPIIFLRDMRMWELQALVEFMYRGEVYVEQQQLAKLMQAAVALQVRGLSNQGKDNTDSNAESISQQPSTPTTPTTPTKQDLSLDIKREDASIIDETNESFLECTPSIGSPTTTPSTIPTAAQNTQNSASMEHTEALQHLEKALSACEATLTETPGLVKMEPDEQFNQDPKPYTISMARSTNCTPGSPFPAIEGYQRRQRRSEEELKQASDMVTRGMTFQVASEKYNIPISTIRFYMVRKGILQRRKRGRGSNNLGLNSQPGSPASPPFHMMNYRLPESLNTSLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00939742;
- 90% Identity
- iTF_00174442; iTF_00175860; iTF_00175190; iTF_00174105; iTF_00175679;
- 80% Identity
- iTF_00175190;