Acir014801.2
Basic Information
- Insect
- Athalia circularis
- Gene Symbol
- -
- Assembly
- GCA_963978495.1
- Location
- OZ021700.1:11431082-11438353[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.00029 0.031 15.2 3.3 1 20 195 214 195 216 0.94 2 22 0.00063 0.067 14.1 0.5 1 23 223 246 223 246 0.98 3 22 0.0013 0.14 13.1 4.7 1 23 257 280 257 280 0.95 4 22 2.6e-05 0.0028 18.5 0.7 1 23 596 619 596 619 0.97 5 22 0.33 35 5.6 0.6 2 23 630 652 629 652 0.90 6 22 9.1e-05 0.0097 16.8 2.0 2 23 764 786 763 786 0.97 7 22 3.1e-05 0.0033 18.2 0.3 2 23 911 933 911 933 0.97 8 22 0.039 4.2 8.5 2.9 2 23 944 966 943 966 0.93 9 22 0.00032 0.035 15.0 0.8 1 21 971 991 971 992 0.97 10 22 0.13 14 6.8 1.3 2 23 1002 1024 1001 1024 0.91 11 22 0.11 12 7.0 2.9 1 23 1034 1057 1034 1057 0.91 12 22 0.00096 0.1 13.5 0.4 1 19 1129 1147 1129 1148 0.97 13 22 0.00017 0.018 15.9 4.0 2 23 1158 1179 1157 1179 0.97 14 22 0.02 2.1 9.4 1.4 1 23 1190 1213 1190 1213 0.90 15 22 0.00041 0.044 14.7 0.6 2 23 1262 1283 1262 1283 0.98 16 22 0.053 5.7 8.1 2.8 1 23 1295 1318 1295 1318 0.91 17 22 0.65 70 4.6 0.2 1 23 1437 1460 1437 1460 0.95 18 22 0.088 9.4 7.4 0.5 1 23 1535 1558 1535 1558 0.97 19 22 0.011 1.1 10.3 0.7 2 23 1939 1960 1938 1960 0.97 20 22 1.8 2e+02 3.2 0.2 2 23 2037 2059 2036 2059 0.94 21 22 2.9 3.1e+02 2.6 1.6 2 23 2063 2084 2062 2084 0.95 22 22 0.59 63 4.8 0.6 1 23 2095 2117 2095 2117 0.93
Sequence Information
- Coding Sequence
- ATGGCTCGTTCTTTTGTATACGAGAGAGAATTAGATGCCAAGATTCTGTGGGATGATGGGAATTCCGAAGTCCGATTTGGGTTAGGCggattaatgaaaataaaaaaagaagtagaagatgcggatgttgaaaacgataAGACTGAGATGGTTGATGAAGGACTATGTGTTTCTTCAGTCCACAACAATAAGggtatcaaatttcaatttgaagATGATTCGACAGATCAGCCTGGGATGAGCCAGAAAAAGTCTAGTCCAAATctgatattaaaaattcatgattCTTTGACACAGACTGACGATAATTGTTACACTgttgagaaaaagagaaaaatattcagcaGCGAAGAACTCGGAATAAACGAAGCATCTAACacaaagaagaaattcaaacCTGAGGAGAGCAAGCCTTTAGAACatttaccgtcgtcgtcaaaacTTGAAAAAGTTCGTAAGCGCGTTAAAATTCGTGTAACTAGtacgaaaaattctttgaagaACCGTGTAAAAGGGGATATCACAAATAAGACTGCTAAAAGTTTGCAAAAAGGTTTTGATGAATCGAGAAATAATTTGATTCATAAATGTAAAGATTGTGGTAGGTGCTTCCAAAATCGTGAATTATTGCGAGCGCACACGTCTTATTACTCTGCTAGTGGTCCTTTTCAGTGTAATTTGTGTAATGCAAGTTTCATCAAAACTGATTTGTTATCACAACACCTCAAAAGTGTGCACCCCGTAAAACCAAATGATaaagtgtataaatataaatgtaagtTTTGTACAGCTCGTTTTAGTAGGAAGAACTCATTGACTCAACATTTGTTGCATTTACATAAGAAACCAATAGataattcaaatgataatCCAATTgagaaaagtatgaagaaCATTTTGTCGTcggaaaagttgaaaattcgtCAAAAAAACCGTAACAATGACTCTCAAAAAAATACTGACAATGATGTGACAACATCTAACAATATTCATCGACTTGATGCCGATGACGCCAAATATAAGACTTCAATAGTgaaagaagacaaaaagaaTTCTGAAAGCGAACTTGGCAATCATCATTCAGACAAAGACGCTGGAAAATCAAAACACTCGTTACTCGTGACTTTAGTAGATAGTGGGGCAAAAGAATCTCTTATGGATAGTCCAAACAAAAAATCTTTAGCGTTAAAGATGAAACGGAAGACAAGAATAACTGAAGAAAATGTACAGAAAAAGGTTCTCACGGGAgaagatgaaaatgatgaaatgaaGACTCCGAAGATGCGAAGCATGCCGCTTCGACGAACCAGAAGCAGCTCACTCAAAGGTCACGCATCAGGAAGTCCTGCGGTAGCAGCTAATATCACAAAGGTCCTTCAGAAAGCAAGTCAGAGTTcaacaaataatataaattttggaCAATCTGATCATAGAACAGATAGAAGTAAGCAGTCATTTGAAGACGAGCAATTGGAATCGGTTTCGATGAATAAAGAGAATATTAGGAATTTAGCATCAGAAATAGTAAATGACGATGTGATGTCAGCAATTGGACGTAAGGGCATCAGCTCAAATAGGAGTGAATCAATATTTTCCAGCACGGCTAATATGGTTTCTACATCGAATCCTCACGAACACTCAGCGAGATTAGCATCTCGCGAGGTACCAGGTTATAAGCCGGATGGTGGCCGGAATGAGTCAAATACTCCGATGTTACCTTTGAGAAAAGATACAGCTTGCGGCAATCGTTGCCCCGAAGGAAATGTCGGTAAAGGCGAACTTCAGTATGTTTGTAAATACTGTCCCAGATCATTCAACGATAGACCTACTCTGGCTTCACATTATAGATGGAAACATGAAAAATCAAACCGAAAACCTGATAAACTTAAATGTATTCTATGCAGTCAGACATTTTGTGATGAAAATAACTTAATTGGCCATTATATCTCAGTCCATATGAAGTCCATTAGCGGTGTTATCGAATGCTGTGTATGTCACGTTCGCATATGTGGTCTTGCTATAATGAAACAACACTTGATTAATCATCATCGAAGATTAAACGCACGgcatattaaaaaattttgtcggaAATGTCATCAAAGACTTAGTACACTTTGGCTGCGAAAATATTGCTCTACGTGTAAGCCGAACAAATTCATAAAAGAATCGAATAAGGCGGTATCACATAACTTTCAAGATAAACAGCAATTGTCTGATAGATTGCCACCTGTTCCAGTATCGAATGATAACGCTAAAACGTGTACTAGTCTGCGTATCAGCGAAAATCTCAAATGTAGCGATTGCGATTGCGTGTTTCAGGATGAtgatcaattaaaaaatcacCAACGTACACTGCATGGTATACTTAAATGCACGGGACAAAACAAAGCTATAGATATTTTAAAGTTAACTCATATCACAACCGTAAGGCGTATCAAGCCAATTCAGAAGTTACCttgtaataaaaatgtcaGGTTCAAGTCTTCTtcaagaaatgaagaaattgtCAAGTCAGAAAAGCATTGTAAACATGATAAGCAATGCGTTAAAAAAATGCGTATCGGTAAAAGGCTCGAGTTTTACGCAAGGGGTACTAAAAATCTGCGTTctaatcatgaaaaaaaacagcgaaaACTATATGACAATAAATGTAATGTGTGCGGGCTAAATTGTTGTTGTAGTAGTAGTTTGAAACTCCATAAGGAACGTTACTCAGTATGGGGTAGGAATACTTGTAACATATGCGGACTGAGATTTGTATCGAAAGCCATGTTACTAACACACATGAAATCGGCCCACAATCCAAAAATATTACCATTCTATAGATTAAGATGTGAGATTTGCAGGCAGGGGTTTTAcaataagaaatttttgagaattcaTCTCTCACATTTTCATAACATCAAATATTATCAATGTCAAATCTGTAAAATAAGATTCGATAACGCAAAACGTTTGAATAATCACATGCGGTACTACTCAAAAATTTCAGGACCACGTTTAATTTGTGACATTTGCGGCGAAACATTCGAATGCAAATATATGTTTAGATATCACCAGACCCAGGCACATGATAATCAAAAACTCAAGTCATTTAAATATTGTTGCGACATTTGTAATTGCACATTCCCTGACGAATTGTTATTACTAGCACATATCGGCCACTTTCACGCCGCACAGGAATCAAAAGTTGACTCATTGATAGCGACtgatgaaaattcatcaaatccaGTATCTGATCAGATTTTTGAAGTGAACGACTCTGTATCAAAATTTCAAGACCTTAGTGACAATCAAGATATGACTAAAGCAGACgaagaatgtaaaaataaaatcattgataaatcgacaacggcgacgactTGGACTCATACTTCAGGTGAATACAAATGCACTACTTGCAAAATAAGTTTTAATGATCCATATGATCTGCTCAATCACGAATGGGAGTTCTCTAACGAAGGTACGAAGGAATGCAATGTTTGTGGAAGGAAATTTACGAAGAATCGTCATCTAATAACTCATAGACTTAAACATATTCGAGATGTTAATGAAATGCTTTATGAGCACGAATGCAACATTTGTAAAGaagatttttcatcattggaacaaatgaaaattcacggATTGCATTTGCATGGCCCTCAATTCAGTTGGGAGACGGACTCACAAACGACTGTAAATGCATTAAATACtccgaaaaaattaaacagagAGGGggtcgttttattttttcgaaaactgtGCCTCAATCGTAAATTGCCAAATACACTATCATCGCCTCGTTGTGATTATTGTCAGGAAATGTTCAACAGTGTTAGTTCGTTGGGTATTCACATGAAAAAACATGCTTATCAGGCGTATTACACGAATTCATCAAGATACCTTTGTCTCATTTGTAAACACAAATTCCGTACTAACGATGTTTTGAGAGCACACGTTATACATTATCATACGTTCGATCGGAAGAAATCAAATACCACTGAACCTGAAACAGATTGCTTGAAGAATTCTCATCATGTTGGTACTGAACCAAATAATCATCGTGATAGTACATTGCAACAGTTCTCGGGGTTCGTGGATTATTCTATAACTCAGAAAACAAATCCAAATAGTCAATCATGTCAAGAtggacaaacaaaaaaacaaaccattAGTGATGCTCAGTCAAATTCGTTATTATCGCTGGAAGATGAATCTCAACACTTTATTTGTTCAAAACCAATCAAAGGTGAGATTTGCTTGGGGAAAGCCGCTACTCATCAGTCTTTGCAGAATCACTGTGAATCTTGCATCGGTAAGGGTCGATTCAGATGCAATATCTGCGAAGCCGAATCTTCAACGGAAACAtccaaaaaaatacatgtattaaAATGGCACGGGGACGAGCGCGCTAACACACTACCGACGGATATTTCTAcgaagaaatcaatgaatgaaaataaggaGCTGGCCATTGATAATCGCCTAAGGGCACCTAATAATGCTGAATCTTGTGTGAAAGTAACAGTGGATCAAgagaaatgtaaaatttgtGATGAATTATTCTTAGGTCATCAAAATCTGATGAGTTACTGTGAGTCTTGTCTCGCCAAGGATAGATTTAAATGCGCTATGTGCAATGCTGAATTTTTTAGCAAGAATTCTGTTCTACTGCATGAGAGAAGAATTCACGGAGGCGAATTGAGGGAAAAACTACCACAATCATTGGGAAATGAGAATTCAATAGAGGAAACTGAAAACGCTTTGGTATTGCCAACCGAATTATCTATAGATCAACAGTTACTGAAAATTGGAAGAGTGAGGGTGAAACCGCTCTCCGATACATCACtgatatcgaagaatgaaaagaaatatcacGAAAACGAAGGACGGCAACGGAgagtaaaatatttgaagaaacgTGAAGGGGATTTATTGGAAGAATTTAACGTTTCAATAGCCAATAACGATTCAATAATCCAAAGCGAAGGAAATGGAAGACCTCATCAGATCTTGGTTGATAAGTTAGGAACGACAAATCAATTTACAAACAATAGGCAAAATAAAACTAtcagacaacaaaaaaagtctGGGCCTTCTGCTTGTGACCTTCATCTAGATACATCAATTCCTCGAGTAATccttctaaaaaaaaatccggaaaatcgtaaaacagaaaaacatttttcgatCTGTAGTGAAGATTCAATATGCGTCCAGCCTAGCTCAACAACCACCCTATCTAAGGacgaagaaagtaaaaaatcacGAAAAGAAGGGATAGCTAATCCTCCACAAAGTTCAGTCAATCAATTCTCACTTCAACCTGCGTTTAATTCCGATGATTATGGCCTTGATAGTCGTGTTCAAAATACTACTTTTCAAGTAATCCAAACTTCAAACCAAATACTATCGTctagtaaaaatttttctaatgaaaataaaaaacagctCACAAGTATTAAACCGACCGTGGGCGCTAGTTCCGTGGTTTCTGAACAGCAGACCGATCATCCTAATCTGAAAATCAGTAACGAGGACGATGTTGTAATCATAAGCACTCATCTACTGACACCGCTTTCCAATGTTGATACAAAATCTTCCGATACTGATGACTGTTCGATAAAATATAGTTCCCATAGCCAAAAAGTAACCCTTGATACCGATAGGATTAGCAACTCAGATATTTTGTGTCAATCTGCGACTGTATCATCATCGTCCAATAACTCAGACCAAAATGTCAAGGCTTCTGGTATCACATTAACACAATCCTTAAAACATGAAAGTGCTTTCGCTAATAAATCACATACATGGAAGCTTGTTGCTGCCGTTCGTTGCAGTTattgcaaattattattctctgaAAAAGTTAAATTACTGGAACATATGAAGTTACACAGATCGGACAAGGTTTCAGCATGTAGTACAACATTATCCAATAAAGACGTGGTTCCTAAACGCTTGAATGAACACAAATGTTCAGTATGTAAAAAATGCAaagtatcattttttccaaaagtCGTAGATGCTCACTCTCCtgggattgaaaaattttgttcaaagtGTGAAACACTTCCACCATTACCTGCTAAAAATATGATAGGAAGTTTCGATCTACGTCCCATGACATGCGGCTTGTGTATGAAATCGTTTAATTCTATTCCCGAGGTAATGAGCCACTTGAAACTGAATCACCTGACACTGGTTTGCGGTATTTGCGATTATAAATGTCACGCTGAAAAGGTTTTGCTCACCCACATGCAGCAACATACTGCGAATCGTTCTACTATCGTCGAACCATTTCCATGTAAGACTTGTAAGAAATACTTCTTAGGTGGTTCAGATCTTGCGAAACACGAATCATCCCATTCGCagaaaattgattaa
- Protein Sequence
- MARSFVYERELDAKILWDDGNSEVRFGLGGLMKIKKEVEDADVENDKTEMVDEGLCVSSVHNNKGIKFQFEDDSTDQPGMSQKKSSPNLILKIHDSLTQTDDNCYTVEKKRKIFSSEELGINEASNTKKKFKPEESKPLEHLPSSSKLEKVRKRVKIRVTSTKNSLKNRVKGDITNKTAKSLQKGFDESRNNLIHKCKDCGRCFQNRELLRAHTSYYSASGPFQCNLCNASFIKTDLLSQHLKSVHPVKPNDKVYKYKCKFCTARFSRKNSLTQHLLHLHKKPIDNSNDNPIEKSMKNILSSEKLKIRQKNRNNDSQKNTDNDVTTSNNIHRLDADDAKYKTSIVKEDKKNSESELGNHHSDKDAGKSKHSLLVTLVDSGAKESLMDSPNKKSLALKMKRKTRITEENVQKKVLTGEDENDEMKTPKMRSMPLRRTRSSSLKGHASGSPAVAANITKVLQKASQSSTNNINFGQSDHRTDRSKQSFEDEQLESVSMNKENIRNLASEIVNDDVMSAIGRKGISSNRSESIFSSTANMVSTSNPHEHSARLASREVPGYKPDGGRNESNTPMLPLRKDTACGNRCPEGNVGKGELQYVCKYCPRSFNDRPTLASHYRWKHEKSNRKPDKLKCILCSQTFCDENNLIGHYISVHMKSISGVIECCVCHVRICGLAIMKQHLINHHRRLNARHIKKFCRKCHQRLSTLWLRKYCSTCKPNKFIKESNKAVSHNFQDKQQLSDRLPPVPVSNDNAKTCTSLRISENLKCSDCDCVFQDDDQLKNHQRTLHGILKCTGQNKAIDILKLTHITTVRRIKPIQKLPCNKNVRFKSSSRNEEIVKSEKHCKHDKQCVKKMRIGKRLEFYARGTKNLRSNHEKKQRKLYDNKCNVCGLNCCCSSSLKLHKERYSVWGRNTCNICGLRFVSKAMLLTHMKSAHNPKILPFYRLRCEICRQGFYNKKFLRIHLSHFHNIKYYQCQICKIRFDNAKRLNNHMRYYSKISGPRLICDICGETFECKYMFRYHQTQAHDNQKLKSFKYCCDICNCTFPDELLLLAHIGHFHAAQESKVDSLIATDENSSNPVSDQIFEVNDSVSKFQDLSDNQDMTKADEECKNKIIDKSTTATTWTHTSGEYKCTTCKISFNDPYDLLNHEWEFSNEGTKECNVCGRKFTKNRHLITHRLKHIRDVNEMLYEHECNICKEDFSSLEQMKIHGLHLHGPQFSWETDSQTTVNALNTPKKLNREGVVLFFRKLCLNRKLPNTLSSPRCDYCQEMFNSVSSLGIHMKKHAYQAYYTNSSRYLCLICKHKFRTNDVLRAHVIHYHTFDRKKSNTTEPETDCLKNSHHVGTEPNNHRDSTLQQFSGFVDYSITQKTNPNSQSCQDGQTKKQTISDAQSNSLLSLEDESQHFICSKPIKGEICLGKAATHQSLQNHCESCIGKGRFRCNICEAESSTETSKKIHVLKWHGDERANTLPTDISTKKSMNENKELAIDNRLRAPNNAESCVKVTVDQEKCKICDELFLGHQNLMSYCESCLAKDRFKCAMCNAEFFSKNSVLLHERRIHGGELREKLPQSLGNENSIEETENALVLPTELSIDQQLLKIGRVRVKPLSDTSLISKNEKKYHENEGRQRRVKYLKKREGDLLEEFNVSIANNDSIIQSEGNGRPHQILVDKLGTTNQFTNNRQNKTIRQQKKSGPSACDLHLDTSIPRVILLKKNPENRKTEKHFSICSEDSICVQPSSTTTLSKDEESKKSRKEGIANPPQSSVNQFSLQPAFNSDDYGLDSRVQNTTFQVIQTSNQILSSSKNFSNENKKQLTSIKPTVGASSVVSEQQTDHPNLKISNEDDVVIISTHLLTPLSNVDTKSSDTDDCSIKYSSHSQKVTLDTDRISNSDILCQSATVSSSSNNSDQNVKASGITLTQSLKHESAFANKSHTWKLVAAVRCSYCKLLFSEKVKLLEHMKLHRSDKVSACSTTLSNKDVVPKRLNEHKCSVCKKCKVSFFPKVVDAHSPGIEKFCSKCETLPPLPAKNMIGSFDLRPMTCGLCMKSFNSIPEVMSHLKLNHLTLVCGICDYKCHAEKVLLTHMQQHTANRSTIVEPFPCKTCKKYFLGGSDLAKHESSHSQKID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -