Basic Information

Insect: Athalia circularis
Gene Symbol: -
Assembly: GCA_963978495.1
Location: OZ021701.1:26713478-26714738[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.4e-07 4.7e-05 24.1 3.1 1 23 141 163 141 163 0.99

2 7 2.2e-06 0.00023 21.9 4.2 1 23 169 191 169 191 0.98

3 7 0.00014 0.015 16.2 3.6 1 23 197 220 197 220 0.94

4 7 3.3e-05 0.0035 18.2 4.1 1 23 235 257 235 257 0.98

5 7 6.8e-07 7.3e-05 23.5 5.5 1 23 263 285 263 285 0.98

6 7 2.3e-05 0.0025 18.6 5.3 1 23 291 314 291 314 0.97

7 7 1.2e-05 0.0013 19.5 3.1 2 23 331 352 330 352 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.4e-07	4.7e-05	24.1	3.1	1	23	141	163	141	163	0.99
2	7	2.2e-06	0.00023	21.9	4.2	1	23	169	191	169	191	0.98
3	7	0.00014	0.015	16.2	3.6	1	23	197	220	197	220	0.94
4	7	3.3e-05	0.0035	18.2	4.1	1	23	235	257	235	257	0.98
5	7	6.8e-07	7.3e-05	23.5	5.5	1	23	263	285	263	285	0.98
6	7	2.3e-05	0.0025	18.6	5.3	1	23	291	314	291	314	0.97
7	7	1.2e-05	0.0013	19.5	3.1	2	23	331	352	330	352	0.97

Sequence Information

Coding Sequence: ATGGCCAACAGGCGTCGTTTGGAGAAGTTTGGGGAACTTGACATTTTAAGAACTGTCAAAACACTTTGCTTTTCACGGAAAACATGGAAAAACTATACTGACACTGCCCACATTTGCATGAGGATGGATCCAACAGAAATCAAGGAAGAACCCCTTGTTGAATTTGCAGACATCGAAGTGGTACCGATGGATGGAGAAATCGACAGTTCGGACAGCAGACTGGGAGCTAGTGAGATGCTTGAGCTAGAAGAAGTCGAAAATTCAGCTCAATTTTATGCAACTATCTTGATGAAAGAAGAGCAGTCAGAGGAATTTTATGAAGACTCCAGTAGCAAGGTAGAGAGCGAAGCTCTGTTGAGTGAGAATCTCAAGGATCATAATGAGCAGATCAATGATGAAGTGATATCCTTGAAAAGGGTATTTCAGTGTCCCTTATGCAGCAAAGAATACACTCGTAAGGATCACCTTAATTACCACATGAAAATTCATGCTGGGTTCAAAGACTTCAAATGCGACGTTTGTAACAAAGAGTTCAGGCAAAGAGTTCAcctaaaaaatcacaaaaaagtTCATACTGGAGAGAGAGATTTCAAATGCCAAGTATGCGGCAAAGACTTTGTCCTCAAGCACCATTTGACAACTCacaatattaaaattcatACCTGCAATATGCAACAGGATGTAGGTGGGTCCAAGCGCTGTTTCAAGTGCCAGATATGTACAAAAGAGTTTGTGAGAAAAGATCACTTCGTATATCACACTAAAATCCACACCGGTCTAAGGGACTTCAAGTGCAATGTCTGTAGTAAAGAGTTCAGGCAGAAAACTCATCTAAAAAATCACATGAAGTTGCACACAGGGGAAAGAGAATTCAAATGTGATATTTGCGGGAAAGAATTCGCCCTTAAACATCACCTTACAACACACCATTTAAGGATTCACGCCGGCACCACAGCCCCCAGGATAAACGGGGAGAACAGAGATTTAAAAACTTGCAGAATTTGTAATAAAGAATTCATCACCAAACGTCATTTGAATGGCCACATGAAAGTGCATTCCAATTTAATAGAAGCTAAGTAA
Protein Sequence: MANRRRLEKFGELDILRTVKTLCFSRKTWKNYTDTAHICMRMDPTEIKEEPLVEFADIEVVPMDGEIDSSDSRLGASEMLELEEVENSAQFYATILMKEEQSEEFYEDSSSKVESEALLSENLKDHNEQINDEVISLKRVFQCPLCSKEYTRKDHLNYHMKIHAGFKDFKCDVCNKEFRQRVHLKNHKKVHTGERDFKCQVCGKDFVLKHHLTTHNIKIHTCNMQQDVGGSKRCFKCQICTKEFVRKDHFVYHTKIHTGLRDFKCNVCSKEFRQKTHLKNHMKLHTGEREFKCDICGKEFALKHHLTTHHLRIHAGTTAPRINGENRDLKTCRICNKEFITKRHLNGHMKVHSNLIEAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00175281; iTF_00175934;
90% Identity: iTF_00175281; iTF_00175934;
80% Identity: -