Basic Information

Insect: Athalia circularis
Gene Symbol: -
Assembly: GCA_963978495.1
Location: OZ021698.1:31432877-31436107[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00046 0.049 14.6 1.0 1 19 265 283 265 283 0.87

2 8 3.9e-05 0.0042 17.9 6.6 1 23 293 315 293 315 0.98

3 8 2.5e-06 0.00027 21.7 1.7 1 23 321 343 321 343 0.98

4 8 3.2e-06 0.00034 21.4 0.5 1 23 349 371 349 371 0.98

5 8 4.1e-07 4.4e-05 24.1 2.8 1 23 377 399 377 399 0.98

6 8 3.7e-06 0.00039 21.2 6.2 1 23 405 427 405 427 0.98

7 8 0.00012 0.013 16.4 0.5 1 23 433 455 433 455 0.97

8 8 5.4e-05 0.0058 17.5 6.6 1 23 461 483 461 484 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00046	0.049	14.6	1.0	1	19	265	283	265	283	0.87
2	8	3.9e-05	0.0042	17.9	6.6	1	23	293	315	293	315	0.98
3	8	2.5e-06	0.00027	21.7	1.7	1	23	321	343	321	343	0.98
4	8	3.2e-06	0.00034	21.4	0.5	1	23	349	371	349	371	0.98
5	8	4.1e-07	4.4e-05	24.1	2.8	1	23	377	399	377	399	0.98
6	8	3.7e-06	0.00039	21.2	6.2	1	23	405	427	405	427	0.98
7	8	0.00012	0.013	16.4	0.5	1	23	433	455	433	455	0.97
8	8	5.4e-05	0.0058	17.5	6.6	1	23	461	483	461	484	0.95

Sequence Information

Coding Sequence: ATGGTGGGTGAAGTATGCCCCAACTGCGGAGAGTACACTAATGCGTCAACGTCCCGTTTAGTTAGGGATGCCTGCGGGCACAGGAAGTGTCGAATATGCTTAGTTGATGAGGAGGAAGGATGTAAAGCCTGCCAAAGTGAGCATCGCATTCAATCGATCGGTAACTTTGATTATCCATTTCGCTCCTCACCATTAGCTTCAGTCTCCGGGGATTTCAGCACTTCTGAAACATGCTctgaaaaaggagaaatggTTCAGCAGCCTCTGGAACTTGTGATTAACAAACCACTAGACCATGTACAAGGCCTCTTTGTCCATCAAGAATCATGTGGCTCAGAAAGCAGTACGCGCCATTCGGTATGGGTGGGTGAGCATAGCATTAACACTGAAAACAATGCAGTGGATCAAAATTCGGAGTCAAAAAGAACTGGGAAAACAGGAATTCATACGTTTAATGAGAATGAAGCTACTGACCCCTTGCAACTTGGACATCATTCTGCTTCTGATCTAgGTTTTGATGCCTGTGACCGACCAATGAACCAGGAAGTGTCGGTGCAGCCGCAAAGTAGTATTCAAAAATTAGAGCCATTGGAGTTGGTGACTAATCTGCGTTCTCCTCCAAAAAGTGAAGGCGAGCATCAAAACTCACTAGTTCAGGAAACGGTTTATTGCGAACGGAATcAGTTTCAGTCGAACCACCCTGGCAATGAGGATGTACAAAAgccaaagaaacgaaagaattgTAGGCTCAAGCGGACACACATATCTGTGATACCAGGAGTCCAGGAAACATACAAGTGTGATATATGTGGTAAAACGTTTAAAAGTCCAACAGCGAAGCGGTACCATGATTCTTGCCTGACGGGAATAAAGCCGTACCATTGCACAATCTGCGACAGGAGTTTTGTAAAACAGTCACACTTTCAGTATCACGAACGAACGCATACAGGCTATAAGCCATTCGAATGCTCGGTCTGTGGAAAGGCATTTCCACAGCGCAACAAACTCAACAGACACCTTCATTCTCATCAAAATGACAAACGTTTCAAGTGTTCAATTTGTGAGAAGGGGTATAGCAGTAGAGAAGACCTGAAGAGTCACTTGAACGTTCACACAGGGGTACGACCGTACCCTTGTCAAATTTGCAAGAAATCATTTCGCGAAGCAACCAACCTAACTCGCCACATGCACACACACTCCAATGAGCGTCCTCATACTTGTGAGCAATGCGGCAAAAGTTTCAAGGACAAATGCTTGCTCGTCCGACATAGACGAACACACGGTAAAGAGCGTCCATTTTCATGCTCCGATTGCACGAGAGTTTTCCTCTCAAAGAGTGAGTTGAGTCGTCACTTGGCGGTACATTCGGATGATAAGCCGTTCCCCTGCCAGTTTTGCAGCACAGTCTTTAGGCGAAGAGACAATCTTAATCGTCATACTCGACATCATCATTCAGAGGATAGAATCACATCGCCAGATAAACCTGCACCTACAGTCGAAACCCCAGCTGTTGTGGAATCAAAACCAGCAAGTGTTGTTAAGCAAAAGACAAGGCCAAAAAGTAAACCGAAAGCCTCCGCCACTCTAGTACCGAAGAGCCCAGCAAAGATATCCGTACTTTACCTAAATTCTCATGAACAAATCAAATGCCGATTAGATTCCAGAAGCAACGTTACGCCTGTGATAAGACCAACCAGTGAATTGAGCAATGCAGTGCCTGTTATTAATGGACCAATTAGCATCAAACGACCTGAAGAGAAGACTAATTCTCCTAAAAAAGCTTTTACCCATACGGAACCGATTCCATTGGCTGAAGCCGTTGTGATTAACAgaagaatcgaagaaaaattgtaccCAAAAAGCGATTCAAACAACGACTGTTTCTTTCACCCCGATTTTCGTAGCAGTCGAGTCGAAAGGCAGCACCCTGTTCTTAAGCCAATTCGAGAATTTCCGCTTCGACCTAATCATGCGAACAAAAGCATGTTGGCTGCCAAGGTTTATAGCCCTGAGGTATCGATTTCCGAGCTACAGATTCCATCAACAGCGCTAAATCGAGTTGACAAGTTTAACCAAACTCGTCCGTTTCTTCCTCAAAAAAAGCTAAACATTCAGCCAGATGTACCTGTATTATGGGGTGAGTGTCAAGATTCAAAAAGTATAAACGCACTGAGGCATACGGTTCCGAAGAAGCGAGCTATAGAGGAAATGCGGACAAATCCAATGGTTGCCAAGTCTCCAGACTTCACGCCAATCTTGACGCGACAGAGGCAACAAAGTACTTCGATAGGTGGGCAAAATGAGCCAGAGCGAGTAAATTGTGTGCCCACCATAACTAAGACTGGAAATACAAATGGCAACGGTGACCCTGAAGAATTCATTTTACCCCACAGTGGTATTCCAGATAATAAAGGTACGAGCGGTGGAGCTAGTTCTGCTACTGGTGGCGTGGAAAAGTCCGGCGTCAAAAAATTAAGCGACATACACTGGAGACGGAGGACTTCGGAAATATTGAGACCTCGGATACATGGGTTCGATTCATTTGTCAACTGTCAATTATCGGAATTAGAAATACCTGAAGAGGCTAGTGACGCAGACGGTAAACGTTAG
Protein Sequence: MVGEVCPNCGEYTNASTSRLVRDACGHRKCRICLVDEEEGCKACQSEHRIQSIGNFDYPFRSSPLASVSGDFSTSETCSEKGEMVQQPLELVINKPLDHVQGLFVHQESCGSESSTRHSVWVGEHSINTENNAVDQNSESKRTGKTGIHTFNENEATDPLQLGHHSASDLGFDACDRPMNQEVSVQPQSSIQKLEPLELVTNLRSPPKSEGEHQNSLVQETVYCERNQFQSNHPGNEDVQKPKKRKNCRLKRTHISVIPGVQETYKCDICGKTFKSPTAKRYHDSCLTGIKPYHCTICDRSFVKQSHFQYHERTHTGYKPFECSVCGKAFPQRNKLNRHLHSHQNDKRFKCSICEKGYSSREDLKSHLNVHTGVRPYPCQICKKSFREATNLTRHMHTHSNERPHTCEQCGKSFKDKCLLVRHRRTHGKERPFSCSDCTRVFLSKSELSRHLAVHSDDKPFPCQFCSTVFRRRDNLNRHTRHHHSEDRITSPDKPAPTVETPAVVESKPASVVKQKTRPKSKPKASATLVPKSPAKISVLYLNSHEQIKCRLDSRSNVTPVIRPTSELSNAVPVINGPISIKRPEEKTNSPKKAFTHTEPIPLAEAVVINRRIEEKLYPKSDSNNDCFFHPDFRSSRVERQHPVLKPIREFPLRPNHANKSMLAAKVYSPEVSISELQIPSTALNRVDKFNQTRPFLPQKKLNIQPDVPVLWGECQDSKSINALRHTVPKKRAIEEMRTNPMVAKSPDFTPILTRQRQQSTSIGGQNEPERVNCVPTITKTGNTNGNGDPEEFILPHSGIPDNKGTSGGASSATGGVEKSGVKKLSDIHWRRRTSEILRPRIHGFDSFVNCQLSELEIPEEASDADGKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00175928;
90% Identity: iTF_00175271;
80% Identity: -