Basic Information

Insect: Athalia circularis
Gene Symbol: -
Assembly: GCA_963978495.1
Location: OZ021698.1:34006449-34008320[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0021 0.23 12.5 0.2 1 20 95 114 95 116 0.94

2 14 0.02 2.1 9.4 0.9 1 19 137 155 137 156 0.94

3 14 0.28 30 5.8 4.7 1 23 167 190 167 190 0.94

4 14 0.041 4.4 8.4 1.9 1 23 233 256 233 256 0.94

5 14 0.0021 0.23 12.5 4.8 1 23 274 296 274 296 0.97

6 14 0.32 34 5.6 2.3 2 23 309 331 308 331 0.93

7 14 0.19 21 6.3 2.5 1 23 369 392 369 392 0.95

8 14 0.012 1.3 10.1 2.0 1 23 409 432 409 432 0.95

9 14 1.4e-06 0.00015 22.5 1.3 1 23 438 461 438 461 0.96

10 14 0.014 1.5 9.9 0.8 3 23 468 489 466 489 0.94

11 14 7.1e-06 0.00076 20.2 0.7 1 23 494 517 494 517 0.97

12 14 1.9e-08 2.1e-06 28.3 0.4 2 23 524 545 523 545 0.97

13 14 5e-08 5.3e-06 27.0 0.4 1 23 551 573 551 573 0.98

14 14 1.8e-07 1.9e-05 25.3 0.3 1 23 579 601 579 601 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0021	0.23	12.5	0.2	1	20	95	114	95	116	0.94
2	14	0.02	2.1	9.4	0.9	1	19	137	155	137	156	0.94
3	14	0.28	30	5.8	4.7	1	23	167	190	167	190	0.94
4	14	0.041	4.4	8.4	1.9	1	23	233	256	233	256	0.94
5	14	0.0021	0.23	12.5	4.8	1	23	274	296	274	296	0.97
6	14	0.32	34	5.6	2.3	2	23	309	331	308	331	0.93
7	14	0.19	21	6.3	2.5	1	23	369	392	369	392	0.95
8	14	0.012	1.3	10.1	2.0	1	23	409	432	409	432	0.95
9	14	1.4e-06	0.00015	22.5	1.3	1	23	438	461	438	461	0.96
10	14	0.014	1.5	9.9	0.8	3	23	468	489	466	489	0.94
11	14	7.1e-06	0.00076	20.2	0.7	1	23	494	517	494	517	0.97
12	14	1.9e-08	2.1e-06	28.3	0.4	2	23	524	545	523	545	0.97
13	14	5e-08	5.3e-06	27.0	0.4	1	23	551	573	551	573	0.98
14	14	1.8e-07	1.9e-05	25.3	0.3	1	23	579	601	579	601	0.98

Sequence Information

Coding Sequence: ATGATCAAAACTGATTCGGCTGGCAGATTTATCTTGGGCAAAGATTCCGTTCTGAGGGAACTCTGGCAGAAATTAAACCCAGAGGGAAAACCCTCTTATTCTCTGGTGCCTGTCACGTCCACAAGAAAATTCAGGATGAAGTCAGGAGACAAATTGATACCGGCCAATGAAATCAAGGTGGAAATCAACGAGGATTTAATCAGTGCAAGATGTTCGACAGATATTGTTACAGATCCATACCACGAGTCACTGGCCCATCTCTGCCAGGTTATGATAGGTTGTTATCCATGCGATAAATGTGACATCAAATTTCCTATTGAAAGTATGTTACGGAGGCATAAAACcagaaatattcgaaaatccaAGCTTGAAAGATTGAAGCCAATTCGATTACGTAAGTCTATTGTTCACACGTGTGCAAAATGCGATGCAATATTCTCAACACAGCATCTCTTAGATGACCACAAGTGGGGGCACAGAGTCGAGAAGAACGTTTCATATCTATGCGGTATCTGCAACTTCAGATGTTCCAAGAGAACAACTTTGTCCTCCCATTTCATGAGGAAGCACAAGATTCGAGGCTCTGCTGAAAAATCTGATTTATGTAACTGCGGCAAGTGCAGCTGCAAACATTGCAAACAAAATGACCCCCAAACGCGTATGTGGACACCCAAAGAGAGGCAGAATGAACGCATTTTTCTATGTAAGCTGTGCGATTTCAAATCAAACAAAAGAGGTACGCTTGCATCTCATATGACCAAAAAGCACATGCGTAACAAAAAAGTACTAATGAATAGAGATAGCAAGGCAAAGAAAGAGTTCAACTGTAACATCTGCGATTATAAAACTTGCGAAAAGGAGAATCTTCAACATCATGTGCAACAGCATGAAGAGTCATTAGACTCTGGTGGGCCAGCATCACTTTCCTGTACGTCCTGTGATTTCAAATGTAACAAACGAGCTACGCTGGCGTCTCATGTCGCAAGAAAACACAAGACAACAGCAGAAGAATGCAAATGTAATATCTGCGACTTCAAGTGTCTGAAAAAAAGCACTATGTATTCTCACAAGCGAAGACACAGGGCAGAAAGTGATGGAACATTGTACAATTGCAACGAATGCAATTTTAAAACATTGAAAAAGGCCTCCCTTTATTCTCATATAAAGCGAAAACACAAAATCCAATCTGTGACTGGTTCCACTGTCGATCTGATCACAGAATATTTTTACTGCAATCAGTGCgattataaaaacaaaaataaatacgagCTTAAAGTACATGTTGCGCGAAAACACACGGATGATTACAAATTCTCGTGCGAAACTTGTGGCAAGAAGTTCAAGGTCAAAGGCGACCTTACAAACCACATAAGATTCAATCATAAGGAGGGTCCTGTCATATGCGATGTATGTGGCAAGACATGCTTGAACAGCAACTCTCTTTACGTGCATCAAAAATTTGCTCATTATAAGGCAAAGTACGAGtgtaaaatttgcaaaagaaGACTCGTAACCCAGGAAAACCTAAATGAGCACATGCTGAGACAgcacgagaaaaaagaaaatgttgtaTGTGAGGAATGCGGAAAGACGTTCTCTAGGAACAGCCGACTTAAGGTTCACATGAGAATTCACACCGGAGATAAACCATACACTTGTAACATATGTGGCAAATCGTTTGCCAGACGTACGGCACTGAAACAACACCTTCTTATACACACGGGGATTCGACCATACGTCTGCGATATCTGCGGGAAATCTTTCACACAAAAACCAGGGCTCATCAGTCACAGGAAATCGCATCCAGGATCTCATCCACCCCTTCCAAGAGTGCTCATCGATCACATATTGAATGATGTTATGAATAACTAA
Protein Sequence: MIKTDSAGRFILGKDSVLRELWQKLNPEGKPSYSLVPVTSTRKFRMKSGDKLIPANEIKVEINEDLISARCSTDIVTDPYHESLAHLCQVMIGCYPCDKCDIKFPIESMLRRHKTRNIRKSKLERLKPIRLRKSIVHTCAKCDAIFSTQHLLDDHKWGHRVEKNVSYLCGICNFRCSKRTTLSSHFMRKHKIRGSAEKSDLCNCGKCSCKHCKQNDPQTRMWTPKERQNERIFLCKLCDFKSNKRGTLASHMTKKHMRNKKVLMNRDSKAKKEFNCNICDYKTCEKENLQHHVQQHEESLDSGGPASLSCTSCDFKCNKRATLASHVARKHKTTAEECKCNICDFKCLKKSTMYSHKRRHRAESDGTLYNCNECNFKTLKKASLYSHIKRKHKIQSVTGSTVDLITEYFYCNQCDYKNKNKYELKVHVARKHTDDYKFSCETCGKKFKVKGDLTNHIRFNHKEGPVICDVCGKTCLNSNSLYVHQKFAHYKAKYECKICKRRLVTQENLNEHMLRQHEKKENVVCEECGKTFSRNSRLKVHMRIHTGDKPYTCNICGKSFARRTALKQHLLIHTGIRPYVCDICGKSFTQKPGLISHRKSHPGSHPPLPRVLIDHILNDVMNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00175922;
90% Identity: iTF_00175922;
80% Identity: -