Basic Information

Insect: Athalia circularis
Gene Symbol: -
Assembly: GCA_963978495.1
Location: OZ021702.1:19301670-19304113[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.9e-05 0.0053 17.6 1.9 1 23 297 319 297 319 0.97

2 12 0.00077 0.083 13.8 4.6 1 23 323 345 323 345 0.98

3 12 0.00054 0.058 14.3 3.9 1 23 350 372 350 372 0.96

4 12 0.00045 0.048 14.6 3.5 1 23 424 446 424 446 0.98

5 12 0.0008 0.086 13.8 1.4 1 23 451 473 451 473 0.97

6 12 0.00013 0.014 16.3 2.1 1 23 523 545 523 545 0.98

7 12 0.00043 0.046 14.7 1.5 2 23 553 574 553 574 0.98

8 12 1e-06 0.00011 22.9 2.1 1 23 585 607 585 607 0.96

9 12 0.00012 0.012 16.4 1.2 1 23 613 635 613 635 0.97

10 12 0.00016 0.017 16.0 0.7 1 23 641 663 641 663 0.98

11 12 4.8e-06 0.00051 20.8 2.0 1 23 669 691 669 691 0.96

12 12 8.6e-05 0.0092 16.8 0.3 1 22 697 718 697 718 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.9e-05	0.0053	17.6	1.9	1	23	297	319	297	319	0.97
2	12	0.00077	0.083	13.8	4.6	1	23	323	345	323	345	0.98
3	12	0.00054	0.058	14.3	3.9	1	23	350	372	350	372	0.96
4	12	0.00045	0.048	14.6	3.5	1	23	424	446	424	446	0.98
5	12	0.0008	0.086	13.8	1.4	1	23	451	473	451	473	0.97
6	12	0.00013	0.014	16.3	2.1	1	23	523	545	523	545	0.98
7	12	0.00043	0.046	14.7	1.5	2	23	553	574	553	574	0.98
8	12	1e-06	0.00011	22.9	2.1	1	23	585	607	585	607	0.96
9	12	0.00012	0.012	16.4	1.2	1	23	613	635	613	635	0.97
10	12	0.00016	0.017	16.0	0.7	1	23	641	663	641	663	0.98
11	12	4.8e-06	0.00051	20.8	2.0	1	23	669	691	669	691	0.96
12	12	8.6e-05	0.0092	16.8	0.3	1	22	697	718	697	718	0.96

Sequence Information

Coding Sequence: ATGGCGATGAATTCAAACTACTTTGGTTTGCCGCTCAACCTGGATAGGGCATGTAGGATATGTCTTTCAGAAAGTACCAACCTATCACCCATATTCTGCAGTGATCCAGCAACAGACGATTTCTCTGGTCTTTATCAGAAAATACAAGTTTGTGGCTCGATAGAAATCCGGGAACAGGATGGATTGCCTTCACTGATCTGCGACGTTTGTATCTACAAAGCAACAGTTGCTCATGAATTCCGACAACAGTGTCAAAATTCTGATGCGCGATTACGATTATACTACAATAAGCCCGCAAAGTCTAACGTGACGgATTCGAGCACACAAACCGATCCACAAACACGAATTATTCTGACAAAAAAACCAACCAGTCCtcaggaaaattattttgtcaaaGAGGAAATGCAGTCCGCGAGCACACAAGAGTTTGTAAATCCAGTTGAGTCATTTGCACAGCCTCAGTTATgcatagaagaaaataaaatcaacaacCACACCATGGTAGAGGATAAAATGATGTTATGTAATATCGGATTTGAgggaaacaaaaatgatgttcAATCTGAAATGTTGGAACAGAATACTCATCATTCCTTATTTCCTCAAAGAGATTTGGAAGAAGCTGGAGGTTTGGTTacgatagaagaaaaacaaacagaacTAGAAGGAGAAAAGGAAGCAGACCACAAAGAAAATGACATGCTTACAGATGAATATCTTGTCGTCGGATTATTGAATGAGAATGTGGAGGAAGAGAATAAACCTCGTACAAAGCGTACGTTCAGTAGAAAAGCAAAATCGCTGCCCGTAAAAAGTTACAGTAACGAAGAGGTCAATGATGACTACTACGAGCCAAGCAGCGACAGTCAAGATTCGGATGtgatgaaattcaaatgtaAAGTATGCTCGAAACGGTACGCCACTCAAAAAGGCTTGAAGAAACATTCCCTTGTCCACGACAAAAAACACAAGTGCAAcatttgtttcaaaatgtTTTACAAGCTAGAAAATATGGAGAAACATAAAAAGATACATGCCTCGAAACCTCACGCATGTCAGTTATGTCACGCATCATTCTCGAAATCACAGAGCTTAGTGCGCCATTTAAAGTCTCACACAGAAAAAGTAAATGACATTATCAAACAAATTAATACTGATGATCAAAATGACGAAAAACATAACAAAAGAGAACTGAAGAATGACGAAGACACAGACGACGAAGTTGGCGCAGTAAATGAACCGGACGAATTTGAAAATGCCCCAGAGTTATACAAATGTGAAGTATGCAGCCAGTATTGTTCTTCATTAAAAAACTTGAAGAGACACACTCTTGTACatggtgataaaaaatattcttgtACAGTATGCAAAAAGTGGTTCTTCCGACCAGATACTCTTAAGAAACATGCTGAAAAACATGGCCATGGTTTACTGGACAACTTGGTCGAGGATAATAAGTTGTATGATTCAGATGATGATTCGTTTTCCAATCCTTTGGAAAGTTTATCAACCAGCAACAATGAGAGTGTCAAGAAGGAAGGAAGTGATGAAGATGGTGGGGGAGAATACAAATGTCAGCATTGTGATAAAGTCATGGCCTCCAAGAAAGGACTGAGGCGGCATGTATCCATGCACAAGCCAAAAGCTGAACCAGCAACTTgtgaaatttgcaaaaaagtTTGTGCCAGCCAAGCGAGGCTGGCTCTACATCAAAAGACGCATAATAAACCTAAAGAGAAGGTACCTAGGGAATATTTGTGTCACATTTGCAGCAAGGTATACCCGAGCAACTCGTCTTTAACTTATCACATGAGGACTCACACTGGAGTCAAGCCACATGTATGCAAAATATGTAACAGCGGTTTCACAACGACTACTAGTTTGGCGAATCATCTTCGCATACACACCGGCGACAAGCCGTTTGTTTGCCATGTTTGTAGCGCAGCATTTGCCGTCAGCTCAGCTTTTAGACGTCATTTAACACGTCATACAGGAGAAGCAAATTACTTATGCAAAACTTGTGGTAAAGCTTTCAAGAGACTTAGCACATTAAAGGAACACACTTACACCCATTCCGGTGAAAAACCGTACGTGTGTAAAACGTGTGGAGCAGCTTACAGCCATAGTGGAAGTTTGTTCGCACATCAAAAACGATGTCGAGCTCAATATGGAGAGATGGTTGTTGACGATCATCACCATACAGTTTCACATCATATTCATGTGAATAACGTTCAATCCGCTGTTCGCTCGCTCGCAGTTATTGGTCAGATGTTCTAA
Protein Sequence: MAMNSNYFGLPLNLDRACRICLSESTNLSPIFCSDPATDDFSGLYQKIQVCGSIEIREQDGLPSLICDVCIYKATVAHEFRQQCQNSDARLRLYYNKPAKSNVTDSSTQTDPQTRIILTKKPTSPQENYFVKEEMQSASTQEFVNPVESFAQPQLCIEENKINNHTMVEDKMMLCNIGFEGNKNDVQSEMLEQNTHHSLFPQRDLEEAGGLVTIEEKQTELEGEKEADHKENDMLTDEYLVVGLLNENVEEENKPRTKRTFSRKAKSLPVKSYSNEEVNDDYYEPSSDSQDSDVMKFKCKVCSKRYATQKGLKKHSLVHDKKHKCNICFKMFYKLENMEKHKKIHASKPHACQLCHASFSKSQSLVRHLKSHTEKVNDIIKQINTDDQNDEKHNKRELKNDEDTDDEVGAVNEPDEFENAPELYKCEVCSQYCSSLKNLKRHTLVHGDKKYSCTVCKKWFFRPDTLKKHAEKHGHGLLDNLVEDNKLYDSDDDSFSNPLESLSTSNNESVKKEGSDEDGGGEYKCQHCDKVMASKKGLRRHVSMHKPKAEPATCEICKKVCASQARLALHQKTHNKPKEKVPREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCKICNSGFTTTTSLANHLRIHTGDKPFVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHQKRCRAQYGEMVVDDHHHTVSHHIHVNNVQSAVRSLAVIGQMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00718825;
90% Identity: iTF_00175908; iTF_00175247;
80% Identity: -