Basic Information

Insect: Athalia circularis
Gene Symbol: -
Assembly: GCA_963978495.1
Location: OZ021699.1:9677239-9679331[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.018 2 9.5 0.4 2 23 126 147 125 147 0.93

2 11 0.011 1.1 10.3 5.7 2 23 216 237 215 237 0.94

3 11 1.1e-05 0.0012 19.7 3.8 1 23 364 386 364 386 0.97

4 11 1.2e-06 0.00013 22.7 0.5 1 23 392 414 392 414 0.98

5 11 4.6e-05 0.0049 17.7 1.3 1 23 420 442 420 442 0.97

6 11 2.9e-05 0.0031 18.3 1.4 1 23 457 479 457 479 0.97

7 11 9.3e-08 9.9e-06 26.2 1.0 2 23 486 507 485 507 0.97

8 11 8.2e-06 0.00088 20.1 4.2 1 23 513 535 513 535 0.99

9 11 5.3e-07 5.7e-05 23.8 6.0 1 23 541 563 541 563 0.98

10 11 6.4e-05 0.0069 17.2 4.6 1 23 569 591 569 591 0.95

11 11 0.00013 0.014 16.3 3.5 1 23 597 619 597 619 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.018	2	9.5	0.4	2	23	126	147	125	147	0.93
2	11	0.011	1.1	10.3	5.7	2	23	216	237	215	237	0.94
3	11	1.1e-05	0.0012	19.7	3.8	1	23	364	386	364	386	0.97
4	11	1.2e-06	0.00013	22.7	0.5	1	23	392	414	392	414	0.98
5	11	4.6e-05	0.0049	17.7	1.3	1	23	420	442	420	442	0.97
6	11	2.9e-05	0.0031	18.3	1.4	1	23	457	479	457	479	0.97
7	11	9.3e-08	9.9e-06	26.2	1.0	2	23	486	507	485	507	0.97
8	11	8.2e-06	0.00088	20.1	4.2	1	23	513	535	513	535	0.99
9	11	5.3e-07	5.7e-05	23.8	6.0	1	23	541	563	541	563	0.98
10	11	6.4e-05	0.0069	17.2	4.6	1	23	569	591	569	591	0.95
11	11	0.00013	0.014	16.3	3.5	1	23	597	619	597	619	0.97

Sequence Information

Coding Sequence: ATGTTTATCGTTACCAAGGAAATAGATAGCGAGAATATAAGCAAATTATGTCGAACTTGTTTGAGAGAAGACGGTGAAAAAATGGTTTGCCTATTTGTGGGTCCAGCCGGCTCGTCGCTCGCTGCTAAACTTAGATCTCTGTCTTGCTTGGAGGTCTGGCAAGGGGATGGGCTACCTGAAAAAATGTGTGATAGGTGTGTAACGAGAGCTGAATCAGCACTGCTGTACAGGGAACAATGCAGAGCCGCCGATAGAGCTTTGAGACAAGCTGCTATCAAGGTCTCGGGGTTGACTTCATACACAACTGTATCAGGCTGCAAACTATATCAGCAGAATCAAGGATTTGTGCCTATTCAGAACTCTcagaaaactttgaaatgCATTGAGTGCGGTGCTGTGTTTGTGAACTACCAGGAACTATGTGAACACAGCAGGCTACATGTGCCTTCTGTACAGAACACAACTCCGGTTCAGCACATGCATATAGTTGAGCCAcagaacaattatttcaacattaataatttgaatagCAATTTGGTCGTTGATGACGTACATGGTGTGCAAATTCCTTCTTTGTTAAGATCGAATTCAATGAATGGTACACCAGTAGATAATGAGGAGCCAAGTCGGGCAGCTTGTGCACTGCATTGCTCTCTATGTAATCACACCTTTACTAACAGGACTCAATTGATTAGCCACAATTTTACTCACAGTTCTGATCACATGGATCTTTCCTCTGGTGATAATACTAATATAGAGGTGAGCGAGGACTCCAATCAAATTGCGCAAAATTTGAGTTATGATAGGACAGTCAATCATGTGGGAGAAGAttctattgaaaatttatcgttccCACGGGAAATTGTGGTCAATGATACAAGGAAACTGAGGAATCTCAATTTCTCAGCAAATAACACACTGGACGACCTGCAAGAGAATAGGCACCGGTCTTTCCAATGCCTTGAATCTAACGGGATTCAGATTTCTGAAAACCTGGCATTCTCGAAAGTGTCTGAAAACCATTTGAACCATCAACAAACCGAGCCCAAATTAAATATGACAGATGGCTCGATTatcaaagacaaaaaacaTAAGTGTAGTTTATGCCCTAAATCTTTTGCTCAAAAGTCCAAACTAATGACGCATCAGTTTTCCCATACGGGACAGAGACCCTTCAAGTGTACAATCTGTGAAAAGGCATATGCCTCGAAAAGCAAATTAAATGCCCACGTCAGACTACATACCAAAACAAATGTGCATGTTTGCACAATATGCAGCAAAACTTTTGCATTTGCCTCATATCTAGATGATCATTTGAAATCTCATAAATATGGTACCGAAAAGTTAAATGCTTTGAAAGAAAGTACCTTTGATTGTGCCATTTGTGACAagaaatttcgtttcattaAAAACTTTAAAGCGCATTTGCGGCTCCATACAGGTGAGAATTTAGTTCAGTGCGAGTATTGTGATAAGCGTTTTAGCCAGAAATACAATTTGAAAGTTCATTTAGAGTCCCATAAAGACTTAAAAGCGTACAAATGtgaattttgcgaaaaatgttTCAACCAACATGGTAACCTGGTGGAGCACCTTAGAATTCACAATAAATTAAAGCCATACAAATGCGATTTATGTGGCAAATGTTTCTCTCAATCGAGTCATTTGAGGAATCATAAAATATCTCACAACACTGAAAGAGAACATTCCTGCAGATTATGTGGTAAAAAATTCAAGCTGGCCAGTCATTTAAAGAGGCACTTGGACCTGCACACTGGCAGAAAATCGTACAAATGTATTCAGTGTAACCAAATGTTCTCTCAGTCTTTCAGCTTGAAGAGACATTTGAAGCGGCATGCAGATATTCACATCTGA
Protein Sequence: MFIVTKEIDSENISKLCRTCLREDGEKMVCLFVGPAGSSLAAKLRSLSCLEVWQGDGLPEKMCDRCVTRAESALLYREQCRAADRALRQAAIKVSGLTSYTTVSGCKLYQQNQGFVPIQNSQKTLKCIECGAVFVNYQELCEHSRLHVPSVQNTTPVQHMHIVEPQNNYFNINNLNSNLVVDDVHGVQIPSLLRSNSMNGTPVDNEEPSRAACALHCSLCNHTFTNRTQLISHNFTHSSDHMDLSSGDNTNIEVSEDSNQIAQNLSYDRTVNHVGEDSIENLSFPREIVVNDTRKLRNLNFSANNTLDDLQENRHRSFQCLESNGIQISENLAFSKVSENHLNHQQTEPKLNMTDGSIIKDKKHKCSLCPKSFAQKSKLMTHQFSHTGQRPFKCTICEKAYASKSKLNAHVRLHTKTNVHVCTICSKTFAFASYLDDHLKSHKYGTEKLNALKESTFDCAICDKKFRFIKNFKAHLRLHTGENLVQCEYCDKRFSQKYNLKVHLESHKDLKAYKCEFCEKCFNQHGNLVEHLRIHNKLKPYKCDLCGKCFSQSSHLRNHKISHNTEREHSCRLCGKKFKLASHLKRHLDLHTGRKSYKCIQCNQMFSQSFSLKRHLKRHADIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01414394;
90% Identity: iTF_00175238;
80% Identity: -