Acir011261.1
Basic Information
- Insect
- Athalia circularis
- Gene Symbol
- -
- Assembly
- GCA_963978495.1
- Location
- OZ021699.1:11483036-11484232[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-09 6.3e-06 26.3 0.0 3 40 13 50 11 53 0.94 2 2 5.7 5.5e+03 -2.4 0.0 24 34 174 184 172 188 0.84
Sequence Information
- Coding Sequence
- ATGGCTGTCAGAGGAAATTATGGCAAGTGGTCTTCTACGGAATTGGAATTAGCACTCGCAGCTTTTAGAAATGGAAATTGTGGGCTTAATGAATGCGCTCGGATGTACAATATACCAAAAGCCACACTGAAGAGACATTTGGAAAATCGAAACCTCCGTGCAAATGATAGGGTGAAAATTCTGGGTCGGACTACGTTTCTGCCTAAGGAACTGGAGGATGAATTAGAAGCGATAATACTAATATTCGAGGAGAGATTGTTTGAAATGACGACCAAAGATGTGAGAAAACTGGCTTTCCAAATTGCAGAACGAGGCGAAATACGGCATCGGTTCAACAAAGAAACCCGAATGGCTGGAAAAGCATGGTACTACAGTTTCATGGCTCGCCATACACGCTTGTCTCAGCGACAACCTGAATCGACGTCAACAACACGTGCGAGAGGATTCAATCGCGAGAAAGTTGATGGATTTTTTGACATCCTTGAAGAAATCGTGgacaaatataaattaaatgcTTTTCGGATTTTTAATGTTGACGAATCCACGCTTACGACAGTTCAAAAAAAGCCTCAAAAAATAGTTggtctcaaaaaaaaatcactagtTGATCCATCAGCAAATGGTGAGAGAGGTGTCAATACAATTGTCTGCTGCGTCAGTGCTGCTAGCTTTTACATTCCAccgatgattatttttaaacgaaAATATATGGCACCTGAATTGGGAGTTGGCGCGCCAAGCCAAAGCCTTATCCAAATATCAGACACTGGCTACATTAATTCAGAATTGTTTGTAGTATGGCTGAAGCACTTCCATTCCATGGTGCAGTCTTCGCCAGAAATGCCTGTTCTTCTTCTACTTGATGGCAATGTGACTCACAGCAAAAATATAGACGCTATTATATACGCACGTGAAAGTGGAATCATTCTATTACAGCTTCCTGGTCACACAACACATAGGTTACAACCGCTCGACGATGCATTTTTCAAACCCCTTCGAACTTATTACACACAAGCTCAAGAACAATGGCTTCAAACTAATGTTGATAGTATGATTACACCATTCCACGTATCAGGATTACTTGGTGAAGCATATAGTCGTGCGGCAACTGCAGGAGTAGCTGAGAAAGCTTTCAGAAGCTCAGGATTATGGCCTGTGAATAGGCATATCTTTAATGATCATTACTTTGCAGTTTGA
- Protein Sequence
- MAVRGNYGKWSSTELELALAAFRNGNCGLNECARMYNIPKATLKRHLENRNLRANDRVKILGRTTFLPKELEDELEAIILIFEERLFEMTTKDVRKLAFQIAERGEIRHRFNKETRMAGKAWYYSFMARHTRLSQRQPESTSTTRARGFNREKVDGFFDILEEIVDKYKLNAFRIFNVDESTLTTVQKKPQKIVGLKKKSLVDPSANGERGVNTIVCCVSAASFYIPPMIIFKRKYMAPELGVGAPSQSLIQISDTGYINSELFVVWLKHFHSMVQSSPEMPVLLLLDGNVTHSKNIDAIIYARESGIILLQLPGHTTHRLQPLDDAFFKPLRTYYTQAQEQWLQTNVDSMITPFHVSGLLGEAYSRAATAGVAEKAFRSSGLWPVNRHIFNDHYFAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00174950;
- 90% Identity
- iTF_00174950;
- 80% Identity
- -