Basic Information

Gene Symbol
Zfy1
Assembly
GCA_905333075.2
Location
HG995380.1:1380833-1389419[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 3.6 5.5e+02 3.1 1.1 2 23 247 268 246 268 0.95
2 18 0.21 33 7.0 0.3 6 23 280 298 280 298 0.95
3 18 2.9 4.5e+02 3.4 0.2 2 23 309 331 308 331 0.92
4 18 1.1e-07 1.7e-05 26.8 1.0 2 23 354 375 354 375 0.97
5 18 2.3e-05 0.0036 19.4 2.6 1 23 381 404 381 404 0.96
6 18 0.017 2.7 10.4 0.0 1 23 410 432 410 432 0.94
7 18 2e-06 0.00031 22.8 2.0 1 23 438 460 438 460 0.98
8 18 0.57 88 5.6 3.5 1 23 578 600 578 600 0.95
9 18 0.00055 0.085 15.1 2.0 2 23 607 629 606 629 0.92
10 18 5.7e-06 0.00089 21.4 1.5 1 23 635 657 635 657 0.98
11 18 1.7e-06 0.00026 23.0 4.4 1 23 663 685 663 685 0.98
12 18 0.00016 0.025 16.8 0.2 1 23 691 713 691 713 0.98
13 18 0.00025 0.039 16.2 1.6 1 23 719 741 719 741 0.93
14 18 0.002 0.31 13.4 0.0 1 23 812 835 812 835 0.94
15 18 1.4e-06 0.00021 23.3 3.1 1 23 841 863 841 863 0.96
16 18 2.8e-05 0.0043 19.2 0.1 1 23 869 891 869 891 0.98
17 18 0.0019 0.29 13.4 0.0 2 23 897 918 896 918 0.95
18 18 0.00035 0.053 15.8 0.6 6 23 928 945 928 945 0.99

Sequence Information

Coding Sequence
ATGAATAATGAAAccgaacaaatatttttactaaattcTGCCCCAAGTCAGTCTTCGGCCTCCTCGCAGATGATGGGGGCCCTGGCACCGTCGCTCAAGTCACAGAGTAACCTTGATAATGTCCGAGACTTCTCAAACGTGTGTCGAACATGCGCCACCATCACGGAATTTGTTATGCCTATATTCAGTGGTGACGGGCTTCAGAACAACTTAgccgataaaataaaaaggcaCTTACCAATACAGGTACGGGAGAGCGACGAGCTACCGCTGGTGGTGTGCTACCAGTGTGCGAGCACGCTGCTGGCATGGCATGAGCTAGTGAAGTGTTCCATTCAGGCCGATGCAGCTCTGCGTGCGAAGATCTGCTCCAACCAACGGaAAACAAATCCACCTGACCCTATCATTAAATCAAGATCAAGTGTAGAAGAGGAAGCACAGAGCAAGTTGTTTTACGCGAGTATCAGAAATGCTCTCATTGACTTTCATATTGATCTGGATGAAGATGATACTGATATAGAGTTTGTTTGCCAAAAGTGTGTGGAGAAGCCAGCGCTGTCCACTGTGCACAGCCTCGCTGAACATATCCGACACGACCACTGTCCAGACACACTCAACAATACTGTTAAAACATTCATCACCAACTACATAACGTTCGAACAAGTACTAGCGGAAGATTCTGACAGAGAAACTCAATCAGACACTAAAGAGAAATGCCAGTTAGTTCTGCCGAGCCTGCACTGTCCGTTCTGTGCGAGTTTGTTCTCTTCGGCCACTCGGCTCGTCTACCATCTCAACAAACACGTGGAGGTAAGCATGGCGGCCGGCGCCATGTGCTGCGACCTCGTCTACAGCGACAAGAAACACTTCGTGCAACACTTGCAAGAGGCACACGTCGACAGGACCGCCGACGAGCCAGTGTCAGTGTGCGTCAGCTGTGGCTTCACCGCAGACCATGCCGAAGAAATGAGACAGCATTATAAAGACGCGCACAACGACGTGAAAAGTGCGAAAGAGAAAAAAGTAGAGAGTCCAAACAACCAGAAGTTCATCCAAGCGGTGTGCCCCGAGTGCAACAAGACGTTCTCCAACAAGTACAACATGTTTGCGCACATGCGCAGTCACACGCACACCGCGGTCTACCCGTGCGATAAGTGCACCCGGACCTACCGCAACCAGGGGAACCTCACTCATCACAAGAGGCTTGCGCACCAGGGAATACTCAACTTCCTATGCGTCGAGTGTGGGGAGGCGTTCCCCAGTCGGTCAGAGCGCGACATACACGCGCGCATACACTCGGGAGAGACGCCCTACAAGTGCCCGCACTGCGGCAAGTCGTACCGCGCCAAGAACACGCTCACACGACACCTGGAGATACATGCAGACATACGCAAGAGCCCCTGCGACTTGCCCGAGGATCTCCGCAGTGCCCCCTCTTACCTATCCGAGCTGTCCGATGACGAGCCGCTGGCCACATTAGCTACCAAAAAGCCCGTGAAGCTCTATACCAACTTCTACAGAGCACTGGTGAACTTTAGAGACCATTTTGTTAATGATCAACATCATGAGGATTATCCTGACTTCACCGACTCGAGTGTGTCTGACGTTGAAGAGAATGACGTGGACAGATTCGACGACCTGTCGCAGTGCAACATGAGGCGAAACAGACTGGACGAGGAGACGAGGCTAGAGCTGAGAGAAGTGCAGAACAAAGTCGACAACAAGACATACTATACGTGTAAGATCTGCAGCAAGAATCTGAGCTCTGCGCACACGTACCTGTTCCACAAGCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCAACGGACTGCAGCGGCACCTCACGGAGACGCACGAGCGCGTGCGCCGGTACAACTGTTCGCTCTGTACTAAGAACTTCGCCAACTCACAGAATCTCAAGCAGCACTTACGGATACACACCGGAGAGAAACCATTCGTGTGTTCTCACTGCGGGAAGAGGTTCACTCAGAGTGGTTCGTTACACGTGCATCTGAAGACACACAGTGAACAGTTTCCTTATGAGTGCGCGGAGTGCGGAGCTAAGTTCAGACTGCGGTCGGGGCTGGTGCGGCACAGATTGAAGCACACGGGCGAGCGGCCGCACGTGTGCGCGACGTGCGGCAAGGGTTTCCGGCAGCGGCACGAGCTCACGACGCATGGCCTGGCGCACAGCGGCGCGGCGCCGCACGCCTGCGCGGCGCTGGTAATACCAGAAGAAAGCGTTCAAGAAGACGACAAAACTAAAGTCGAAATTATCAAGAAACCGGAGTTTACAATAACCGAGAATGGCAAGCGATACGCAAGGTGTGGTGTGTGTCAGAAGAGCGTGTCCGTGGGGGGCTGGGCGCGGCACGGGCGCGCCCACCGCGGCGAGCGGCGCCACAGCTGCGCCGCGTGCGGCCTGGCCTTCGGCGACAGCGGCAACCTGGCGCGCCACGTGCGGGCCGTGCACTCCAAGCAACGGCCGCACGCCTGCCCCACCTGCCCCAAAACATTCTCAAGGAAATCTCACCTAGAAGACCACGTAAAGTCTCATTCAGAGAGTAGAACATTCGTGTGTGACATCTGCGGCAAGGGCTCCAAGTCGAGCGCCGCGCTGCGCATGCACGCGCGCACGCACGCGGCGCGGCGCGTCCCGTGCGCGCAGTGCGGCGCGCGCTTCGGGCGGCGCGCCGAGCTGCGCGCGCACGTGTCCGTGCAcacgggcgagagggcgcacgGCTGCCCCTGCGGGAAAACTTTCCGATTGCGAAGCCAGCTGACAGCACATACTAGAGTGCATCAACAAACACGGGAGCAGGAAATGGAAGATCTAACCAATGTATAA
Protein Sequence
MNNETEQIFLLNSAPSQSSASSQMMGALAPSLKSQSNLDNVRDFSNVCRTCATITEFVMPIFSGDGLQNNLADKIKRHLPIQVRESDELPLVVCYQCASTLLAWHELVKCSIQADAALRAKICSNQRKTNPPDPIIKSRSSVEEEAQSKLFYASIRNALIDFHIDLDEDDTDIEFVCQKCVEKPALSTVHSLAEHIRHDHCPDTLNNTVKTFITNYITFEQVLAEDSDRETQSDTKEKCQLVLPSLHCPFCASLFSSATRLVYHLNKHVEVSMAAGAMCCDLVYSDKKHFVQHLQEAHVDRTADEPVSVCVSCGFTADHAEEMRQHYKDAHNDVKSAKEKKVESPNNQKFIQAVCPECNKTFSNKYNMFAHMRSHTHTAVYPCDKCTRTYRNQGNLTHHKRLAHQGILNFLCVECGEAFPSRSERDIHARIHSGETPYKCPHCGKSYRAKNTLTRHLEIHADIRKSPCDLPEDLRSAPSYLSELSDDEPLATLATKKPVKLYTNFYRALVNFRDHFVNDQHHEDYPDFTDSSVSDVEENDVDRFDDLSQCNMRRNRLDEETRLELREVQNKVDNKTYYTCKICSKNLSSAHTYLFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERVRRYNCSLCTKNFANSQNLKQHLRIHTGEKPFVCSHCGKRFTQSGSLHVHLKTHSEQFPYECAECGAKFRLRSGLVRHRLKHTGERPHVCATCGKGFRQRHELTTHGLAHSGAAPHACAALVIPEESVQEDDKTKVEIIKKPEFTITENGKRYARCGVCQKSVSVGGWARHGRAHRGERRHSCAACGLAFGDSGNLARHVRAVHSKQRPHACPTCPKTFSRKSHLEDHVKSHSESRTFVCDICGKGSKSSAALRMHARTHAARRVPCAQCGARFGRRAELRAHVSVHTGERAHGCPCGKTFRLRSQLTAHTRVHQQTREQEMEDLTNV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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