Basic Information

Gene Symbol
-
Assembly
GCA_905333075.2
Location
HG995391.1:12840638-12846678[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.96 2.7e+03 0.4 0.3 3 15 74 86 73 128 0.69
2 7 0.013 36 6.4 0.0 21 44 344 368 337 370 0.86
3 7 0.03 85 5.2 0.9 14 45 433 469 417 470 0.69
4 7 0.0031 8.7 8.3 0.2 22 46 583 617 571 617 0.74
5 7 0.00028 0.8 11.7 0.2 3 45 668 719 666 720 0.84
6 7 3.5e-05 0.1 14.6 0.2 14 42 904 939 888 943 0.72
7 7 0.054 1.5e+02 4.4 0.1 3 15 1098 1110 1096 1158 0.70

Sequence Information

Coding Sequence
ATGGATGGCTCTATAGTGGTAAAAACTGAGATGGGGTCTAATGGAGAAATACTGCTTTTCTATGTTGATGAAAATGGTGGCAATGAAGAAGGAGTACTAACAACAGTTGAAAGCATAGAAAATCAAGCAATACAACTACAACAAGACAACTCTTATATTATACAAGATGTTGGAGATGACTCCAATGAAATTAGTATTGATAAATCTGCTTTAGTAGATAACTGGTCCGAGGATGAAGCTAAAAGACTTCTTGTGTTCTACAATGACAACAAACAGACTTTTATATCTGGAACAACGAAAAAGAAACATCTCTGGACCGTAGCATGCAAAACTATGCTTGTGGGTAAAAACCCAAACTCATGTGAAGCAAAACTCAATAGCTTACAAGCCAAGTACAATGAAATATGTGGGCACATACAGAAAGGAGTCTATGTAAAGTGGCCGTACTTTGAACTATGCCACCAAATATTCCATGATGAGACCCCCATGATTACGGTTGAAACCTTGAATACACCAGAACCACAAATAATCAAAGTACCAGCTTTAAAACAGAATTTTGATAATGTTATGGTGGTAAAGAAGGTGAATAGTCGTTCAGCAGCAGATGAGAAGGTTGAAACAATGCTGAAGTTGTATCTGAAATACAAGAAAAACTTCCAAGCAGAGTATTGGAGACGTGGCATATGGGAGACCATTGCTTTAGAGATAGGAGAGGATGACGGAGAATACTGGCAGAAACGTTTCTTAAATTACAAACAACATTACCTAAGATTGATTGACAAAAGACGAGAGAGCGGCTCAGAGGGCATCAACTGGCCCTACCTAGAACTATTCGACAAAATCTTCGAAGGCGACGAAGATTTCCATAGAAAATATATGACAGAAGAGTATAGATTGATAGAAAACCAGGCAATAGCTGAAGTTGAAGAGCCAGCACTTAAAGTTGAAGATTGGGACACCACCGAAATGACCGTATTGGTAAAATACTGTTTTGACTGCTTTGACGAATTTGATGACAAGACAATTCCTAACAATTTCCTGTGGAATGAAATTGGACGTTTACTAGACAAGACTGCTGATACCTGCAAATCAAAGTACGAAGAATTAAAGAACGCACATTTGGACAAATATATTGAAGGTGGTTATGACTTACGAACCAGAAAACCCATTGCAATATTATTCGACAATATTATATCCAAGGAAATTGAGAATCAGATTATGAAAAGTGGTCGAAAGCCTGAGCAATTGGAGACTTGGAAGACAGAAGAATTGGATGAACTTGTGCAATTCTTCTATGACAACATAGAGATGTACAAAGACCTTATTTGCCACTTTGTATGCTGGGCAGGAGTTATAAGAAAGTTGAAAAGGAGCCTACAAAGTTGCAGGAGCCAATGGGAAGACCTTCTAAGCCTTTACAAGACAATATTGGATGATAAGAAAGAAAATCCGGATATGCAGATTGATTGGAGGTATATCGAAGTCTTTGATAGGATATTTGACTATGGCATGGATACTAATCTGCTTTCTGGGTATGAAACCTTGAAGGGATTTGGACAGAGTCAAAAAAATGATACGGGGAAGGTTGGTGTAAAAAAAGTGAACATCAAAATGGACGACGCCACCGAAGAATTCACCGACGATGAAGAGTCTTACGACGAACGAGGTTTCACAAAACGCACGAAACGCCGCTCGGGAGACTCCAAAGCGTTCAAAATCCTCGAATACTACCAGAAAAACAAAGACAAGTTCTCTACCACAAACAGAAACAAACATTCTCTATGGGACATATTAGCTAAACAGCTCGGCATATCCGCCACGCAGTGCGCACACCGATTCAGAAACTTAAAGCAAGTTTACACTGCTTACGTACAAAGAGAAATCAACAAACCAGAAATGCCGATCCTATGGCCTTACTACGCTCTATGCAAAAAAGTCTTTGGTTACAGAGCAATCAAGTCTAAACTTAAAAACGGAAAACTGGATTCAGATGACAGCGAAGACTGGTCAgcgaaagaaataaaacaattaataaacTATTTCTCACAAAATTACGATGACATCAATAGTAACATAGAGGATACGACCAAATGGTCAGACTTGTCTGGCGAAATAGGAAAAGGTGAAAATTCTTGTAAggaaaagtttttagaactgagAAAGTCTTATAGGAAGTTAAAGACAATGAGGAGTAGGAATCCTGAAGTAAAAATTTCttggaaatattttaatatgtttgaaGAGATCTATAACGCTAAGGAGAATGGTGTGGAGTCTGTGGAGATGGATGATAACGAGACGACGTATGTGGAGATACCAGCGGGTTCTGATGAAAGGATTGAACAAGAAGAAGACGACTACCAATGCATAATAGTGATCCCAGAAGGGCAAGATATATCGCAGATCGAGAATGCACAAATTATAATACAGGAACATCCAATGACTCAAGAAGAACATTCAATGTCTCAAGAAGAACATCTAATGTCTGAAGAAGAACATCCAATGTCCCAAGAAGAACATCTAATGTCCCAAGAAGAACATCCAATGTCTCAAGAAGAACATCCAATGTCCCAAGAAGAACATCCAATGTCCCAAGAAGAACATCCAATTTCTCAAGAAGAAATTGTCATCACAGAACCTCCAAAAGAGGTGAAATCTTTTCTTAAATGGacgaaaagaaataaaaagaggTTGCTTATCTTCTACATTAACTATATTAGAACAAATAAAGGGAAAGAAATTAATGCTAAAGAAATGTGGGCGGAAATAGCTTCAAAACTACCTAATAAAACACCATTGTCTTGTAGAAAAATGTTTGCCAAACTAAAGGCTAATcataaacaaattgatgaattggatccaaatatgaagaaaacTCCTTATTTCGCGTTACTGGAGAAAGTAATGCGTCTAAAGcctaaatttattaaaactgaACAAAATAAGGCATTAAAAGATGGGAAAATTTACAAAGATGTAACTTTACCTGATGATAAAGTGGTACAAGCATTGCAGTACTATTTAGAAAACATTGAAGATTTCGTTAGTCCTAGATTTGAGAAAAAATACCTATGGACTGAACTAGCAAATTACGTTTGTGAGCCCATAACGAAAGTTTTCAACAAAATCCACTATTTAAAGCAAGCGTACAACATGGATACTGACGAAGTATCAGGCGTAAAGACACCATTTGCAGAATTCTTAAAAGAAATCTTCGCTAAAGAGATAGCTATCAAACTTTTTTTGGAAAACCAACCGAAACCTGTGATTGAAGAGCCAGGAGTTGACGAAACCTGGTCAGATGAAGAGACCGAAAGGCTATTAGAATGGTATCTAAGCAATTTAGAAAAATTCAAGAACCCTAAATTCGTCAGAAGCTATCTGTGGATGGAAGTTTCTAGTATGCTAAATAAAAGTGCTATTACTTGTTCCAAGAAAATGTCTGAAATTCGGACGCAGTACAGAAATATGGTGAGGGAAAGACCTGAAGAATTGATTGAATGGAGGTTCCTTGATCTATGTCAGAAGATATATGGAACTGGAAAGAAAGGTACTTCGATGAATAGTAATTAA
Protein Sequence
MDGSIVVKTEMGSNGEILLFYVDENGGNEEGVLTTVESIENQAIQLQQDNSYIIQDVGDDSNEISIDKSALVDNWSEDEAKRLLVFYNDNKQTFISGTTKKKHLWTVACKTMLVGKNPNSCEAKLNSLQAKYNEICGHIQKGVYVKWPYFELCHQIFHDETPMITVETLNTPEPQIIKVPALKQNFDNVMVVKKVNSRSAADEKVETMLKLYLKYKKNFQAEYWRRGIWETIALEIGEDDGEYWQKRFLNYKQHYLRLIDKRRESGSEGINWPYLELFDKIFEGDEDFHRKYMTEEYRLIENQAIAEVEEPALKVEDWDTTEMTVLVKYCFDCFDEFDDKTIPNNFLWNEIGRLLDKTADTCKSKYEELKNAHLDKYIEGGYDLRTRKPIAILFDNIISKEIENQIMKSGRKPEQLETWKTEELDELVQFFYDNIEMYKDLICHFVCWAGVIRKLKRSLQSCRSQWEDLLSLYKTILDDKKENPDMQIDWRYIEVFDRIFDYGMDTNLLSGYETLKGFGQSQKNDTGKVGVKKVNIKMDDATEEFTDDEESYDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTNRNKHSLWDILAKQLGISATQCAHRFRNLKQVYTAYVQREINKPEMPILWPYYALCKKVFGYRAIKSKLKNGKLDSDDSEDWSAKEIKQLINYFSQNYDDINSNIEDTTKWSDLSGEIGKGENSCKEKFLELRKSYRKLKTMRSRNPEVKISWKYFNMFEEIYNAKENGVESVEMDDNETTYVEIPAGSDERIEQEEDDYQCIIVIPEGQDISQIENAQIIIQEHPMTQEEHSMSQEEHLMSEEEHPMSQEEHLMSQEEHPMSQEEHPMSQEEHPMSQEEHPISQEEIVITEPPKEVKSFLKWTKRNKKRLLIFYINYIRTNKGKEINAKEMWAEIASKLPNKTPLSCRKMFAKLKANHKQIDELDPNMKKTPYFALLEKVMRLKPKFIKTEQNKALKDGKIYKDVTLPDDKVVQALQYYLENIEDFVSPRFEKKYLWTELANYVCEPITKVFNKIHYLKQAYNMDTDEVSGVKTPFAEFLKEIFAKEIAIKLFLENQPKPVIEEPGVDETWSDEETERLLEWYLSNLEKFKNPKFVRSYLWMEVSSMLNKSAITCSKKMSEIRTQYRNMVRERPEELIEWRFLDLCQKIYGTGKKGTSMNSN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00771874;
90% Identity
iTF_00123330;
80% Identity
-