Basic Information

Gene Symbol
-
Assembly
GCA_905333075.2
Location
HG995389.1:16713373-16715772[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 4.6e-10 1.3e-06 30.2 0.1 1 45 263 309 263 310 0.94
2 4 2e-07 0.00056 21.8 0.1 2 44 317 363 316 365 0.95
3 4 4.6e-11 1.3e-07 33.4 0.0 1 43 369 411 369 413 0.97
4 4 3.8e-06 0.011 17.6 0.0 3 45 421 465 419 466 0.91

Sequence Information

Coding Sequence
ATGGAAATTGACGACATTGAGTTGGACTCTGAGACCGACTCAGAACTCTACAGTGATGACGATTCGATATTCGAAGCTGAAAACATGAGCCATCATCTTAAGCTGATAGACGATGACGATGCCTTACTCAGTGCGGGGAAGTCGCGTAGCCACATGAtaacccaaaataaaataagcagtgAATCATCAGCAGCACTAGCTCAAATAGATCTAGCTTTGTCGGCAAACAAATTATTAGAAGAAAAGATGAAGAGACTGGAGAGAGATCTCGCCTCACGTCTGAATGAGTGCCGGGAGAAGCTGAAAGTGGTCCAAGGTAGCGCTGGTATACAGAATGATAAAAATGAAACATTCCGCTATATCAATTGTGGTAGACCCTACTTTAAAGACAGACAGAACTTCCCGGCTCCAGATAATGATGATGCTAAATTAGCAAAATCTCAGATGTATGACTTCTCTTTAATCATTTCAGCACCTGGCTGGACAGTGAGAGACAAATCTCAATTTGTTAACATGATGCACAAAATGTcaatagatataaaaaaaaatgagctgTATGGTAAAATTACTGCCTTACAACGccaaaataaatctaaaacagTGGAAAGAGAAATAATGGCCATTAGAAAGGAAATTGATATAGTAAGTAAATTGCCTTTGTATAAAGTAGCTCTTCCGATAGATGAGGAATATGATTGGGACATGTTAGCAAACAAATTAAATAGGAGGCACACAGCACAAGAGTATCAATCCTTCTGGAAGTTATTCTTTCACCCTTCAATAAGCAAAAATAGTTGGAGCAAAGCTGAACATGCAGCATTACAGAGAGTTGCTTGCCAGAATGGTAAACAGGATTGGGATAAAATTGCTGTCAAACTAAATACTGGCAGGACTGGGTATCAGTGTTTTGTGTACTATCGGACAAATATGACCAGCTCTTTTACTGGAAAGAAATGGTCTCATGAGGAGATAACATACCTTAAAAGATTGATAGAATATTTCAAAGAAGACTTTTACATTCCATGGGGGAAAATAGCTGCAGCAATGGAAAACCGAACTAAAATCCAAATCTATAATAAGTATATGAGACTCATTGAACAAAGGAAAGGCAGGTTCCTCCCAGAGGAAGATGCGGTTATTCTTAACTGTGTGCAAAGATTTGGAGAGAATTTTAGGAGGATGACTTCTTATTTACCCGGCCGATCTATGGTCCAGATACGTGCCAGATTTCAAGTCTTGAACAGAATGAGGGTGTCAACTGTATGGACTGTTGAAGATGACAAGAAACTTATACAATTGATGGCTAACCAAGAACCTAACATGAACTTTTCGACAGCTGCCCAATTTTTCCCAAACATAACCAGAACAAAAGTTAGATCTAGATATGTTACCTTGGTTAAATGGATGAAGAAACATCCCAATTTAGATTTGGAACATGCACCGCGACGAGGCGCGCGACGTTTGAATCATGGAGAAGCCAGTGGAAACCTGATAGAGGCAGTAGAGAATTTAAAAAATTCTTTAATTACAACAGTCCAAACGAGGGCTAAGAAAAAGAGGATTACTGAAGAGTCTACTCACAAAGATTTAAATGATGCTATTGTTGTATATCTTGTCAATTGTAtagtaaaagaaaaagaaacagaaTCGAAGAAAATTACTCCAGAAAATCATTTAGTTTTAGGTCCTGACCATGTTGTCTCATTTGCAGACTTGAATGTTACAAACCTGCGcaaaaatatcatatttttaaatgcacGTCTAGACGAGTCTACTTATATTGACAGCAACTATGAAGAAGATTATCCGTCTTTAGGAGATAATAGTCAAGATGTTTCTTTAGTTAAAATGAAATCCTATTCTCGGAAGCCCCCCAACCAAACTGTAATGGTTAGACACGCTCCTAATGTTTGGGGAACTCCTACGCTTTTTCAAGGCATACGAATGCTAAACCAGCGACAGTATGTGTTCCCTCCACAACTGGCAACCATTACCGGTGCTAGAGCCATAATGGCATGTGTGATGTCAACCGGTCCATACAGTGAATCCATAAACCTACATGTGCTTTGCAGGCGTAACATATTATTGAAGGAGCTCTTAGATCAGGCACTTGAACGCTTCTATGTTTTGTTCACATGGCCACTGATCTTATCCAATGAAGTGCCTAGTGAGAGTACTGTATCAAAACTACCAAGAACAGATTCTGTTTTTATCCGACCACCTATATTGCCAACTGCGCCTGAAGTTACGATTAATGTTAAATGtataaagaaatttaaaaatgtagatGTCACAGAAATTATTGATCTGGATGAAGATTCAGCTAAGGACGTCGTGATTGCTGTTGAGGAGAAAATTGATACTGATAGTGATGAGAAGATAGAAAAACTTCTTTGTTGA
Protein Sequence
MEIDDIELDSETDSELYSDDDSIFEAENMSHHLKLIDDDDALLSAGKSRSHMITQNKISSESSAALAQIDLALSANKLLEEKMKRLERDLASRLNECREKLKVVQGSAGIQNDKNETFRYINCGRPYFKDRQNFPAPDNDDAKLAKSQMYDFSLIISAPGWTVRDKSQFVNMMHKMSIDIKKNELYGKITALQRQNKSKTVEREIMAIRKEIDIVSKLPLYKVALPIDEEYDWDMLANKLNRRHTAQEYQSFWKLFFHPSISKNSWSKAEHAALQRVACQNGKQDWDKIAVKLNTGRTGYQCFVYYRTNMTSSFTGKKWSHEEITYLKRLIEYFKEDFYIPWGKIAAAMENRTKIQIYNKYMRLIEQRKGRFLPEEDAVILNCVQRFGENFRRMTSYLPGRSMVQIRARFQVLNRMRVSTVWTVEDDKKLIQLMANQEPNMNFSTAAQFFPNITRTKVRSRYVTLVKWMKKHPNLDLEHAPRRGARRLNHGEASGNLIEAVENLKNSLITTVQTRAKKKRITEESTHKDLNDAIVVYLVNCIVKEKETESKKITPENHLVLGPDHVVSFADLNVTNLRKNIIFLNARLDESTYIDSNYEEDYPSLGDNSQDVSLVKMKSYSRKPPNQTVMVRHAPNVWGTPTLFQGIRMLNQRQYVFPPQLATITGARAIMACVMSTGPYSESINLHVLCRRNILLKELLDQALERFYVLFTWPLILSNEVPSESTVSKLPRTDSVFIRPPILPTAPEVTINVKCIKKFKNVDVTEIIDLDEDSAKDVVIAVEEKIDTDSDEKIEKLLC*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01246845;
90% Identity
iTF_00037763;
80% Identity
-