Acen037986.1
Basic Information
- Insect
- Atethmia centrago
- Gene Symbol
- -
- Assembly
- GCA_905333075.2
- Location
- HG995383.1:12998779-12999567[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-11 2.1e-08 35.5 0.0 1 44 15 58 15 59 0.92
Sequence Information
- Coding Sequence
- ATGGTGTTTAATtataaacacaaaacaaatcgAGCAGCATGGTCAGAAGAAACACTCGATAGAGCTGTAAGAGCTGTAAAAGATGACGGACAATCTATAAATTCAACCGCAAAAAAGTTTGGAATTCCGTTTACAACTTTGCAGAGACATGTGAAGACGGGGAATAAGTCAAAGAAATTGGGTAGGTTCACATCAGTTTTTAGTCCGGAACAAGAAGAGTTGTGTTTGTATCTTAAAAAATTGGatagtttattttttgggttTACTCGTTCAGATTTTTTAGAATTAGTCTATGATTATGCAACAAGAAATCATATTTCTCATCCATTTAAAAATGGCAAAGCTGGAGACGACTGGTTTTCTGGTTTCAAGCGTCGACACTCAGAAATTGTACTAAGAGCGCCAGAGCCAACATCTTTAGCAAGGACAAGAGGCTTTAATAGGCCACAGGTGGAGTTATTTTATTCCAATTATTGGAGCCTAATagaaaaatacagttttgatgCAACTACAATATATAATATGGACGAGACCGGAATAAAGAGCAGTACATCTAAAccaccgaaggttttgtctatcAAAGGCAAGAGGCAAGTCGGAGTAATATGCAGTGCAGAAAGGGGTCAATTAACCACTGTCATATGTTGTTGTAATGCAGCTAGAACGTTTGTTCCACCCTTTTTCATATTTGCGCGCAAACGTATGCAAGAACGACTTCTGGATAATGCCCCACCAGGCTCACAAGCCACCGTGACTGACAACGGTTGGATAAATGGAGAAGCTTTTTGA
- Protein Sequence
- MVFNYKHKTNRAAWSEETLDRAVRAVKDDGQSINSTAKKFGIPFTTLQRHVKTGNKSKKLGRFTSVFSPEQEELCLYLKKLDSLFFGFTRSDFLELVYDYATRNHISHPFKNGKAGDDWFSGFKRRHSEIVLRAPEPTSLARTRGFNRPQVELFYSNYWSLIEKYSFDATTIYNMDETGIKSSTSKPPKVLSIKGKRQVGVICSAERGQLTTVICCCNAARTFVPPFFIFARKRMQERLLDNAPPGSQATVTDNGWINGEAF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00784330; iTF_00212372; iTF_01152961; iTF_01221454; iTF_01526994; iTF_00636243;
- 90% Identity
- iTF_00784330;
- 80% Identity
- -