Acen002245.1
Basic Information
- Insect
- Atethmia centrago
- Gene Symbol
- Jarid2
- Assembly
- GCA_905333075.2
- Location
- HG995366.1:35877879-35888782[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-20 9.1e-17 63.0 0.1 13 89 507 580 496 580 0.90
Sequence Information
- Coding Sequence
- ATGCAGTTGCAATTCACAGTATACAATTCTAACTCCGAAGAATGCGACGCGATCTACAGTGGTCACCGAAGCGACGCGGAGCTGAAAGAAATCTTGCAAAATACAGCTGCCAATCTTGAGCGTGGTAAAAATGTTCATTTCGATGTACCGCCGACTTGCGTCGCGGCAGAGTGGCGCTCTGACCAAGACGTCATAAACGCATCTCAGGAATTACTGGACTCACGCTGCAAAGTATGTAAGCCCTGTATCAGGATTGAAAAACTGATGAAAGTTTCGACTTTACTAAAATCTCAAATTGAATTAACGAGCAAGGGGCAGGAAAACCATGCTGCGGTTCTAGAGAACGAACCAACGGAAAGAGAAGGTGAAACAGAAGACGTTGAAATAGAAATAGACAACGAATACGCGGATTCGACGAACAATGACCAAGGTCATCTTTACTTGCTGTTACCAAAACATTCTTGTGTAATGCTGAAATTAAGAACCAGCATGGTACACGGCAAAGAGGTCTTGGGGGTCCGTTTGATTCCGAGAAATGAGTCTCTGAAAAACAAACAAGAGTTCTCACTTGAAGAACAAGAACATTTACTTGACCAACTTATCGAGACCCTAACAATCGGTCAAGATGTCAATTCGAAGAGTCGAGACGTCGATTCGGAGGGTCGAAACGACAGCGCTGAAGGTCTAAACGACAACACAGGAGGTCGCAACGACAATATAGAGGGTCGAAGCGTCAATTTGGAGGgccaaagtgacatttcgaaGAATCGAACGATAAGCATATCATCGGACAGCTCTGAAGACATGAGCGATGGTACGACTCATGATCAAGAGACGTCAATTCGCCTTAGAGCcgagaaaagaaaaataaaacgattAGCCGTTGAAAAGAAGTTAGCTGAAGCGGAGCTGATGCACTACCGCATGAGAGAGGAAAAGGAAAGAGAGATTGCCCGCCTCGAGGAAGAGAAGAGACGGGAAATATCACGGATTACGGCAGAGAAGAATATCGTTGTCGCGGAGATGTCCCGCTACCACGAGCGGATTACCCAGATGGCGAAGGAGAAAGAAAGAGATTTTGCTCGCCTCAAGGTGGAGATCAGAGCAGAAGTGATATCTAAATTTGAGGCTAATCGGCGTATGTGCGCTGAAGTCGATGGCATGGCGGCGAACCTTGCCAAAGAAAAGGATGCCAAGAGAATGGATCCGGAAGAATTTACAGATCAAGATACTCCTGGCACCAGCAGCTCCTTCCTGACAACGGATGGCGGGTTGCTAGTGGACGCTCCTGTATACCACCCTAGCGAAGAAGATTTTCGTGATCCACTTCGCTACTACGATAAAATCTACCCAGAAGCTGTTAGATATGGCATCTGTAAGGTAGTGCCCCTTCCTGGTTGGAAGCCACCCTTTCGAGTGCATGACGAAATGAGGTTCGATGTTACCAACCAATACATTTCGCGATTGTTCAGCCGCTGGGGACCGGCCGCGAGAGAACTTTGCGCTATCAAGTTGTCCCTCGCCCAACAAAAAGTTAATTTTACACGAGCACCATTGCTGGATGGTGTCGAGGTAAACTTACCGAAATTATACCACCTCGTGCAACGGCACGGCGGACTAGAAACAGTATATAACAAGAAGCGATGGAGCAAGGTCGCAGAAGATATGAAATTTAATAAAGGGCCTAATACTGAGAGGAAACTGGACCAGATTTACGTAAAGTATCTGCTACCATACGATACGCTTTCTCATCAGGAGCGCCAAGATATTATGCGGAAAGTAGAGATCGCATGGAACCGAAAAAATCAAAAGCTTTTAGACCGCGCCGTGAACCCGCTAAACCGCCAGAAGCGATTGCTTGGCTTATTGGACTCTTCTGACGATGAGACAGAAGACGAAGACACGGTGGCCGCTGTCAATGAGGCTGAAGACTGTATCATCAAGGGCGCGGTCATGAACCGAGCTAAATTCAAAAAGATTGCCACCATGACGTACGAGAACACATTCGGACAAGGCTCGGAGGTCGCTGACCCTCCCGAATTGATCAAAATCGAGGAGTATTACTGGCGCCTCGTGACGCTGGGCACCGAGCACGTGTGCGTGCACACCGCTGCCATTGACACCGGCGAAGAAGGGTACGGCTTTATCAAAAATAAGTCGGACTCCTATGGACGACACCCTTGGAATCCTAAGATGGTTAGCCAGAATCCCCGCAACGTGCTTCAGTATTTGGGTCCAGTGTTGGGCGTAACGGTGCCCACTCTGCTTCTAGGAATGCTATTCTCGACCTCCTGCTGGCACAAGGACCCACATGCAGTATCCTGGTTGGAGTATCAGCTCTTAGGACCCGAAAGGATctgGTACGGCATCCCAGCAGATCAGGCGGATAACTTCAGGAAAGCTGTAGAAACTCTTTGCCCGACATCTTGCCAAAACAAAGGTCTGTGGCTGCCGACGGACATCACGATGATCCCGCCGAACCTGCTGCGTGAGCACAACGTGACGCTGTCGCGCGTCAGGCAGAGGGACGGCGAGTACATCCTGGCCTTCCCGAACGCCTACACCTGCTGCATCAGCACCGGCTACACTGAGTCGGAGAGTGTTTATTTCGCACCGCCATCCTGGCTTGAGAGTCTGTGGACAGTCTTTAAGGAGGCCCGAGAAAGTTGCGAGCCGACAATGTTCGCAATGGAACATCTGCTCTACAACATAGGCAAAGACGCGAAAGCTGAGCACACTATACTGAAGATCGCCCAGCCGTTATACGACAAGATGTTGCGCGAAGAGGTCACCAATAGGCAGATGCTGCAAGAGCGGGGTCTGCCATTTTTTCAAGATTTACTGAGCGCCAACACATCACGTAAGAAGAACAAAGCGAACCCTTTCAACCCGCGCGATCAAGACGAGTGCGAGTACTGCAGGGCGACGTTGTACCTCTCGAAGGTAAAGGGGCTCACCGGGAAGAATACAGTTTTATGCCTAGAACACGCACTCAAATTACTTGACACTAAAAAATATAAGGACAGGGACGTACAGCAACTACAAGTTCTGGTGCACGTGAGTGTGAAAGAACTGAACACAGTGCACGACGACATGAAGCGCCGCCTAGGCATCCCGGTCGCCTGA
- Protein Sequence
- MQLQFTVYNSNSEECDAIYSGHRSDAELKEILQNTAANLERGKNVHFDVPPTCVAAEWRSDQDVINASQELLDSRCKVCKPCIRIEKLMKVSTLLKSQIELTSKGQENHAAVLENEPTEREGETEDVEIEIDNEYADSTNNDQGHLYLLLPKHSCVMLKLRTSMVHGKEVLGVRLIPRNESLKNKQEFSLEEQEHLLDQLIETLTIGQDVNSKSRDVDSEGRNDSAEGLNDNTGGRNDNIEGRSVNLEGQSDISKNRTISISSDSSEDMSDGTTHDQETSIRLRAEKRKIKRLAVEKKLAEAELMHYRMREEKEREIARLEEEKRREISRITAEKNIVVAEMSRYHERITQMAKEKERDFARLKVEIRAEVISKFEANRRMCAEVDGMAANLAKEKDAKRMDPEEFTDQDTPGTSSSFLTTDGGLLVDAPVYHPSEEDFRDPLRYYDKIYPEAVRYGICKVVPLPGWKPPFRVHDEMRFDVTNQYISRLFSRWGPAARELCAIKLSLAQQKVNFTRAPLLDGVEVNLPKLYHLVQRHGGLETVYNKKRWSKVAEDMKFNKGPNTERKLDQIYVKYLLPYDTLSHQERQDIMRKVEIAWNRKNQKLLDRAVNPLNRQKRLLGLLDSSDDETEDEDTVAAVNEAEDCIIKGAVMNRAKFKKIATMTYENTFGQGSEVADPPELIKIEEYYWRLVTLGTEHVCVHTAAIDTGEEGYGFIKNKSDSYGRHPWNPKMVSQNPRNVLQYLGPVLGVTVPTLLLGMLFSTSCWHKDPHAVSWLEYQLLGPERIWYGIPADQADNFRKAVETLCPTSCQNKGLWLPTDITMIPPNLLREHNVTLSRVRQRDGEYILAFPNAYTCCISTGYTESESVYFAPPSWLESLWTVFKEARESCEPTMFAMEHLLYNIGKDAKAEHTILKIAQPLYDKMLREEVTNRQMLQERGLPFFQDLLSANTSRKKNKANPFNPRDQDECEYCRATLYLSKVKGLTGKNTVLCLEHALKLLDTKKYKDRDVQQLQVLVHVSVKELNTVHDDMKRRLGIPVA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00726068;
- 90% Identity
- -
- 80% Identity
- -