Asph037907.1
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- -
- Assembly
- GCA_949699075.1
- Location
- OX453030.1:2221298-2230632[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.11 12 7.8 4.8 2 21 160 179 159 180 0.93 2 19 9.3 1.1e+03 1.7 0.4 1 23 186 208 186 208 0.82 3 19 0.0027 0.32 12.8 0.9 1 23 213 236 213 236 0.96 4 19 0.0044 0.52 12.1 2.4 2 23 242 263 241 263 0.95 5 19 0.21 25 6.8 1.8 3 21 268 286 267 287 0.93 6 19 0.0089 1 11.2 0.8 2 23 329 351 328 351 0.95 7 19 2.2 2.5e+02 3.7 0.5 3 23 359 378 358 378 0.91 8 19 0.0014 0.16 13.7 0.2 1 23 384 406 384 406 0.98 9 19 0.049 5.8 8.8 2.6 1 23 412 435 412 435 0.95 10 19 0.011 1.3 10.8 0.9 1 23 444 467 444 467 0.95 11 19 0.0035 0.41 12.4 3.9 1 23 477 499 477 499 0.98 12 19 5.2 6.1e+02 2.5 0.3 2 19 634 651 633 654 0.76 13 19 0.0099 1.2 11.0 0.2 1 23 685 707 685 707 0.97 14 19 0.0011 0.13 14.1 6.2 2 23 713 734 713 734 0.97 15 19 0.0019 0.23 13.3 2.3 1 23 768 791 768 791 0.96 16 19 1.5e-06 0.00018 23.0 1.7 1 23 797 819 797 819 0.98 17 19 0.086 10 8.1 2.4 5 23 829 847 826 847 0.96 18 19 0.15 18 7.3 1.7 5 23 888 906 885 906 0.96 19 19 1.2 1.4e+02 4.5 2.6 5 23 945 963 943 963 0.97
Sequence Information
- Coding Sequence
- atgacTCGCCAAGTAGACATAAAGGCGTTAGTGTCCCATATAGTGCGTGGGGATGGGTCAGATAGATGCCGAATATGTATGGGAGATACAACCGAGGGCCAAGTTCATTTAGAAGATACGGTCATGATAGACGGAGACAAGCCTGTGACACTCGCTGAATTGCTAGAAGTCATCACAGGAATCGAGGTGCGGCTGGACGATGACCTGCCCATAGGACTGTGCACCATATGCTCAGTGTCAGCCCTCCAAGCAGCCGACTTCAGAACCCAGTGCCGCCAGGCGGCCATACAGTGGGAAACCACTCTTGAACTCCTGAGCAGCATACCAAACCAATCAACCTATAATAACAGAATAATTGCAGTACTAACTGAGAATTCCATCACTATCACTGAGCAGGAAAATGAAGCCGAAAAAAAGAAACTACCAAAGTGGCTGAAGCACAAAAGTAGGTCTGAGAATTTTAAAAGCCATAAATGTCAGTGCCCACGTTGTGGTAAACGGTTCCTCTATGCCCAACATCTGTGCCAACATTTGAAGGAATCGTCCAACAATCAACACGCTTGCCACATTTGTGCCAAGATTATGACAAGAGAAGAGCTTATCGAACATTTGATTGGTACCCATAATAAAGAACCATATGACTGTAAGAAATGTCCTGCTATGTTTCGGTCCTACATACAGTATCAAACGCATCTTTCTAAAGCTCATGCGTCTGGAGCTTGCACCTGTGGTGAATGTGGCAGGAACTTCCAGAGCCAACATGCGTACTATGCTCacctttctgtacacacaccgAAAATATGTCCCGGATGTGATGAACTGTTTAGAAATCAAAAATGTTACCACTATCACGTCAAACGCTGCTGTAACCTTGACAAAACTCGCTTAGACACACACAAAACCAAAAATAAGGTCACCATTACGGTGAAAAAGAAGAATAAAAGCATTAAAGTGGGCATGCGAGGAAGCGCAGACTCCGAATGCATCTGTGACTACTGCAAGAAAAAGTTCGCTGGAAAGAAATTTGTTGCGGCACACATACAAATAGTTCACATGAAAAATACTCATAGACCTTGTGTTTATTGTGGAAAGCAGCTCGCAGCTGCACACATGACGACTCACGTCAAAAAACATGAGTCGAAAGAGTCTTTTCAATGTGGATACTGTGGCATAGTCCTTAAAACGAAGTTAGGATACATACAGCATTTACGTCTTCACACTGGCGAGAGACCATATGCTTGTAAATTCTGCGGGGAGTCGTTCTCGGCTTCTTCTCGACGTTCGGAACACGTAAGAAAATGTCACCGAGATGCTGACATAGTTCTGAAACACGCCTGCGAGTTCTGTCCAGCGAGGTTTAGACTACCATATAGGCTGAAGAAGCACGTAAATTCCGTTCATGCCAAAGGGAAAGAGCACTTGTTCCAGTTCGAGTGTGCTATTTGCCCGCAGAAGTTTAGCAGCTGCCGTGGGCTGTTACACCATAGTAGAAAACATCAGAACAATGAGTTTATTCCTGATAAAATACAGCAGGTGGAGCAGGAAGTCGAGCAAACACAAACGCTGCCTAACAAACTCTGCCTCCGATGCAAACAAGAACTAACATCAATACTGCCCTTCATAACACTATGCAAGGAGTCTGCCAAACGTTGGAATGAGATCTCAGAATATTTAGGGACTTTAACAGTCTCAAAAAAGGCTAAAAACCTTTATATAAAAATCGGGAATGATATTCAAAAGTATACTTCAAGATGTCCtgttaacaaaataacatcacgtAAAGAAGCTCTAAGGAGTTTCAAAATACGTCTTCGCCAGCGGATTGCCTACAATAATCGTATGTTTGACGTCAATACGAAAAAACGTGATGTTGGACGTATGAAAAGAAAGAGTAAAATGGTGTGCCCTGAATGTAGCGCCACATTTAGATGCATCGCCAAAATCAATAGACACATCAGTAATTTGAGGAAAAAAATGTGCTGGGAGTGTTTTGAAATCGTTGATATCACCTCCTATGCAGAGCATTACAAGAAGAGTCATAATGTTACTTTATTCCCTTGCCCGATCTGCCCAGATAGTTTCGTAAAAATAGAAAAGCTTACAACACATAAACTTAAACACGCCAAAGGTTCAGAAGAATGCCTTGAATGTCATGAAACTTTTACAAATTCTGGTCATTTGTATACGCATATGCATAAACATAagcctgtcgtatgtgggtgcgGAAAAAAGCTTCCGAACAGAGTTTGCTTCTTTACCCATAAGAAAAACTGCACTCAACACGAGAATATTAAATCCAAATACATATGTGATTACTGCAAAGCTGAATACACTCAGAAAAGCTGTCTGAGAGGGCATATAAAGTTAAGACATACTGTTGGCTGGATATTTCAATGCGATAAGTGTGGAAAGAAATTCTCCAGCCAAGCACACTTGGTTGAACATGGCAATACGCACGAGAAGGTTGTTGATAGACATGTGTGTTATTGTGGGGCTAAATACAGCTCTAGAAGAGGCTATCAAAAGCATTTGAAAAAGCATTTGGAAGGGGTAACGCCCAAGGTCTACTCGCATCGTAAGCCAAAGGTTGTTTCCCTTCCTAAAGCTCAGAGAAAATGTAAGAGCAATAATATTGAAAAGGTTGTTTATAAATATGTGTGTCACTGTGGGTTTCAATACATCACTAGAGGGGGCTATCAAAAACATTTGAAAAGGCACTTGGAAGGGGTATCGCCAAAGGTCTCTTCACTTCCGAAGCCAAAGGCTGTTTCCATTCCTAATACTCAAAGGACATCTAAGGGCAATAGTCATGAGAAGGTTGTTTATGTGTGTCACTGTGGGTTACAATACAACTCTAGAGGGGGCTATCGAAAGCATTTCAAAAAGCATTCAGAGGGGGCATCGGCAAGAGTAATTTTCATTCCGAAACTAAAGACAAAGCCAAACTTCGCTATGGAAGAGAAAAAATCCAAGTTTGTTCTAGTAACCGAATCGTGA
- Protein Sequence
- MTRQVDIKALVSHIVRGDGSDRCRICMGDTTEGQVHLEDTVMIDGDKPVTLAELLEVITGIEVRLDDDLPIGLCTICSVSALQAADFRTQCRQAAIQWETTLELLSSIPNQSTYNNRIIAVLTENSITITEQENEAEKKKLPKWLKHKSRSENFKSHKCQCPRCGKRFLYAQHLCQHLKESSNNQHACHICAKIMTREELIEHLIGTHNKEPYDCKKCPAMFRSYIQYQTHLSKAHASGACTCGECGRNFQSQHAYYAHLSVHTPKICPGCDELFRNQKCYHYHVKRCCNLDKTRLDTHKTKNKVTITVKKKNKSIKVGMRGSADSECICDYCKKKFAGKKFVAAHIQIVHMKNTHRPCVYCGKQLAAAHMTTHVKKHESKESFQCGYCGIVLKTKLGYIQHLRLHTGERPYACKFCGESFSASSRRSEHVRKCHRDADIVLKHACEFCPARFRLPYRLKKHVNSVHAKGKEHLFQFECAICPQKFSSCRGLLHHSRKHQNNEFIPDKIQQVEQEVEQTQTLPNKLCLRCKQELTSILPFITLCKESAKRWNEISEYLGTLTVSKKAKNLYIKIGNDIQKYTSRCPVNKITSRKEALRSFKIRLRQRIAYNNRMFDVNTKKRDVGRMKRKSKMVCPECSATFRCIAKINRHISNLRKKMCWECFEIVDITSYAEHYKKSHNVTLFPCPICPDSFVKIEKLTTHKLKHAKGSEECLECHETFTNSGHLYTHMHKHKPVVCGCGKKLPNRVCFFTHKKNCTQHENIKSKYICDYCKAEYTQKSCLRGHIKLRHTVGWIFQCDKCGKKFSSQAHLVEHGNTHEKVVDRHVCYCGAKYSSRRGYQKHLKKHLEGVTPKVYSHRKPKVVSLPKAQRKCKSNNIEKVVYKYVCHCGFQYITRGGYQKHLKRHLEGVSPKVSSLPKPKAVSIPNTQRTSKGNSHEKVVYVCHCGLQYNSRGGYRKHFKKHSEGASARVIFIPKLKTKPNFAMEEKKSKFVLVTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -