Basic Information

Gene Symbol
-
Assembly
GCA_949699075.1
Location
OX453031.1:8171497-8251607[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.069 8.1 8.4 0.7 1 23 480 502 480 502 0.98
2 16 0.26 31 6.6 1.3 1 23 509 532 509 532 0.95
3 16 7.2 8.4e+02 2.0 1.2 1 14 536 549 536 561 0.81
4 16 0.85 99 5.0 0.4 2 23 662 684 661 684 0.93
5 16 0.01 1.2 11.0 0.6 1 20 698 717 698 720 0.92
6 16 5.9e-06 0.0007 21.2 0.6 1 21 726 746 726 747 0.95
7 16 3.7e-07 4.4e-05 25.0 0.3 1 23 755 777 755 777 0.97
8 16 1 1.2e+02 4.7 5.3 1 23 782 805 782 805 0.95
9 16 0.069 8.1 8.4 0.7 1 23 1329 1351 1329 1351 0.98
10 16 0.13 16 7.5 1.7 1 23 1358 1381 1358 1381 0.95
11 16 2.6 3.1e+02 3.4 0.8 1 23 1385 1407 1385 1407 0.87
12 16 0.0012 0.14 13.9 0.9 1 23 1412 1435 1412 1435 0.97
13 16 0.01 1.2 11.0 0.6 1 20 1572 1591 1572 1594 0.92
14 16 5.9e-06 0.0007 21.2 0.6 1 21 1600 1620 1600 1621 0.95
15 16 2.9e-05 0.0034 19.0 0.3 3 23 1631 1651 1629 1651 0.94
16 16 0.4 48 6.0 5.3 1 23 1656 1679 1656 1679 0.95

Sequence Information

Coding Sequence
ATGAAGATCCCTCATCTTGTGAAGTGGAACCAGCTATGGCTCAAAATCAGAtgTTTTCCAAGAGACCCTAACATACGACGAGAATGGGTTAAAGCTCTAGGTATAAATAATTGGGAAGCAAAAAGCAATTATACAATATGCTCAGAACATTTTAAAAAGGAGAGCTTTTGTGAAACGAAGCATGGATGGAAGATGTTATACCCTGACGCGTTACCTATTAAGAATCTGgaTCTTGATGCGCCAGCAGCTTTGATGGTCTGCCGAGTCTGCCTCGCAGTGGATTCAAACATGCAACGTATAGGCAAATTCAGAGAAGTGTTCAATAGTCTCACTGGTTTGTTGGCCGCTGACAGGGAGTCGTGCAGGCTCCCTCAACTGTTGTGCTGGGAGTGCGCGGCGCGGCTGAAGTCAGCGGCTTCGCTCAGACGCAAGGCTCGGTCCAGCGATGCAATACTGCGTACTTTATTGAAGCCAGACAGATTTATAAGAATCCGGGATATAACAACAATAAACCGGAAAAGTAATGGTCTAAAAACATCACTAGTACAAAAACTAATTGATTCCGAATACTATGATGTAAAAGTACAAGACACTTTTATAGACACAGACCATATTAAAACAGTATATGACTTGGAAGAAGGAATACCTGAATTATTAGAAAATGATGCGAAAAATGACgtaataaattacttaaaagaaCACAATTATGTAAAATCTAACTCTAAAACTAATAATAAGGCTTCAGAAAAGAAACCAGAAATATCAGGAAATTGTATAGCAATTGAAGATATAAGTAATATATGCCTAAGTGATAATAACATAAAAACTGTTATGCTAGAAAATGGTAACGAAGAAAGTAACACAaaatatgttatgttacaaaataATGTTGAAGAAAGTAATgtaaaatttgttattttacaaagtagtaAAAAAGACAGTGATGTTCAATATGTTGTAGTACAAAACGGCGATGAAGgaaataacttaaaacataTTATGTTACAAACTGATAATTGTAAAGTTGAAGAGCCTATAagacaaaataatgaaatagtTACTGAAGAAAATGAAATTAGTGATGAAAATATGTTAGAAGAAAATGTTCATTTCGATGACGATGATTCCGAAATAATGGATGAAAGTGACCTTTTACCAAAAGAATTTGGTAAAATCGTTAATGAAGAAAATCTTAAAGAATTTGATATAGGTGTTAAAAATTTAGATAAACCAAGACAAAATAAACCAGTTACCAGGGTTTTAAAAATTCCAGCTATGATGATTGATAACTCAAGAGCGGTTTCAGGCcaaaacaaaactatcactgAAGATATGAGTGTGTACGAAAACCTGTTGGAGATAACGGACTTAACGTTTGAACAGCAGCGGGAAGAAATATTTAAAAGGCAGGAACGTGAGAGCTATAAAAACGCTCCCTTCAAATGCACTGTATGTTTCACGGGATTCATGGATGAATATGCATTTGACAGGCATGCTCTTAAACATTCGGATACCAGTGGTAAATTCGAGTGTACAATATGCAAGAttcgtaaaaataaaagaagtttgttaaataaacatttattcatCTTACACTCTAGGGAATATAAATGTCTCAAATGTGATTTTGTGACCAGAAATAGCAAGAGTGGCTCATACTTCAATCACGTCCGTTGGAAACACTTTAATTCGTGTGTATGCGAGTACTGCGGAGACACGTTCCTCAATGAGCAAGGTGTTGTTAACCACAAGTCTTTGCTCCACCAATCAGAGAAAAACGTAGAATGTAAAGGGCCGTACTGTAAAGAATGTGACGTTACATTCTTATCAGAAGACGCTCACAGCAAACACCTGAGGGTATCATCCAACCATTTGCAGGACGAATCTGATCCAATACCCAAGAGGAAAGAGCCACCACATGTGAAAAGAACATATTATAAACGGAGAAAACTTCATCGTAttattgaaaaacataacccggTGACATGCGAACAGTGCGGCGAGGAATCACGCAACTACCGCTCGTACGCGCTACACTTTCTAAGACGCCACCCCGGCCTGAACCGCACGCAATACTCGCAGAAAACTCCACACATCTGTGAACTGTGCGGGAAAATATATTCTAATGTATCTGCTCTATTGCATCACAAATGGGTCCACAcgggtaaaaaaaattacaaatgtaATCACTGCGACAAGTCGTTTGCTCAGAAAGTTGGATTAAGAGCGCATTTGTCTTCCATCAAAGAGGGTCAACCTACACACCAGTGTCCAGAGTGTGGAAAAGTATTCGTGTCGGCGAATAATCTGAAGAGGCATGAGCTTATTCATACGGGTCTACCGTTCGAGTGCGATATTTGCAGCAAAAAGTTGGAAACGTACAGTAGACTTCACCAGCATAAACAGCATACACACTACAAGATACCTTGGCCAAAGAAAGTGAACCAAACAGATGCATATAATGAGAAGCGAATTCCTTTGTGTGATGAATTTGTCTCGCCAGTGGATGAAATGGTAATGCCCAGTACTAGTTCCAGCCCCTGTACAATTGTTCCTCCATCATTTCAACATCAGGAGTATGATCTACATACTCTGCCATTGGATGACAAGACTGGACAAAGAAATAGAATGCCCCTACTGAAACGGCTCTTGGAAACTGCACGAAATGAAAGAGATGCAAGTCAGGCACCAATCCTAGCTGATGAAGATCCCTCATCTTGTGAAGTGGAACCAGCTATGGTTCAAAATCAGAtgGTCTGCCGAGTCTGCCTCACAGTGGATTCAAACATGCAACGTATAGGCAAATTCAGAGAAGTGTTCAATAGTGTCACTGGTTTATTGGCGGCTGACAGTGAGTCGTGCAGACTCCCTCAACAGCTGTGCTGGGAGTGCGCGGCGCGGCTGAAGTCAGCGGCTTCGCTCAGACGTAAGGCTCTAACTAGCGATGCAATACTGCGTGCTTTATTGAAGACAGACACGTTTATAAGAATCCGGgatataaaaacaataaaccGGAAAAGTAATGGTCTAAAAACATCACTAGTACAAAAACTAATTGATTCTCAATACTATGATGTAAAAATACAAGACACCTTTGTAGACACAGACCATATTACAACAGAGTATGACTTGGAAGAAGGAATACCTGAATTATTAGAAAATAATGTGAAAAATGACgtaataaattacttaaaagaaCACAATTATGTAAAATCTAACTCTAAAACTAATAATAAGGCTTCAGAAAAGAAACCAGAAATATTAGGAAATTGTATAGCAATTGAAGATATAAGAAATATATGCCAaagtgataataatataaaaactgttATGCTGGAAAATGGTAACGAAGAAAGTAACACAaaatatgttatgttacaaaataATGATGAAGAAAGTAATgtaaaatttgttattttacaaagtagtgaagAAGAAAGTGATGTTCAATATGTTGTGGTACAAAACGGCGATGAAGgaaataacttaaaatatatGAGGGTACAGAACGGCGATAAAgaaaataacttaaaatatattatgttaCAAAGTGATAATTGTAACGTTGAAACTGAAGAGCCTATAagacaaaataatgaaatagtTACTGAAGATAATGAAATTAGTGATGAAAATATGTTTGAAGAAAATGTTCATTTCGATGACGATGATTCAGAAATAATGGATGAAAGTGACCTTTTACCAAAAGAATTTGGTAAAATCGTTAATGAAGAAAATCTTAAAGAATTTGATATAGGTGTTAAAAATTTAGATAAACCAAGACAAAATAAACCAGTTACCAGGGTTTTAAAAGTTCCAGCTATGATGATGGATAACTCAAGAGCAGTTTCAGGCCAAAACAAAACTATCAATGAAGATATTAGTCTATACGAAAACCTGTTGGAGATAACGGACTTAACGTTTGAACAGCAGCGGGAAGAAATATTTAAAAGGCAGGAACATGAGAGCTATAAAAATGCTCCCTTCAAATGTACTGTGTGTTTCACTGGATTCATGGATGAATATGCATTTGACAGGCATGCTCTTAAACATTCGGATACCAGTGGTAAATTCGAGTGTACAATATGCAAGATTCGTAAAAAGAAAAGAAGTTTGTTAAATAGACATTTATTCATCTCACACTCTAGGGAATATAAATGTCTCAAATGTGATTTTGTGACCAGACATAGTGTTGGTGCGGGCGCGCATGTGCAGTTTCATAAAGGCGTACGATATCAATGTACGCAGTGCCCGCTAGTGTTCAACAAGAGTGGCTCATACTTCAGTCACGTCCGTTGGAAACACGCTAATTCGTGTGTATGCGAGTACTGCGGAGACACGTTCCTCAATGAGCAAGGTGTTGTAACCCACAAGTCTTTGCTCCACCAATCAGAGAAAAACGCAGAATGTAAAGGGCCGTATTGTAAAGAATGTGACGTCACATTCTTATCAGAAGACGCTCACAGCAAACACCTGAGGGTATCATCCAAACATTTGCAGGACGAATCTGATCCCATACCCTCGAGGAAAGAGCCACCACATGTGAAAAGAGCATATCATAAACAAAGAAAGTTTCGTCGTAttattgaaaaacataacccggTGACATGCGAACAGTGCGCCGAGGAATCACGCAACTACCGCTCGTACGCGCTACACTTTCTAAGACGCCACCCCGGCCTGAACCGCACGCAATACTCGCAGAAAACTCCACACATCTGTGAACTGTGTGGGAAAATATATTCTAATGTATCTGCTCTATTGCATCACAAATGGGTCCACACGGgtaaaaaaatttacaaatgtAATCACTGCGACAAGTCGTTTGCTCAGAAAGTTGGATTAAGAGCGCATTTGTCTTCCATCAAAGAGGGTCAACCTACACACCTGTGTGCAGGGTGTGGAAAAGTATTCGTGTCGGCGAATAATCTGAAGAGGCATGAGCTTATTCATACGGGTCTACCGTTCGAGTGCGATATTTGCAACAAAAAGTTGGAAACGTACAGTAGACTTCACCAGCATAAACAGCATACACACTACAAGATACCTTGGCCAAAGAAAGTGAACCAAACAGATGTAAACAAAATATGA
Protein Sequence
MKIPHLVKWNQLWLKIRCFPRDPNIRREWVKALGINNWEAKSNYTICSEHFKKESFCETKHGWKMLYPDALPIKNLDLDAPAALMVCRVCLAVDSNMQRIGKFREVFNSLTGLLAADRESCRLPQLLCWECAARLKSAASLRRKARSSDAILRTLLKPDRFIRIRDITTINRKSNGLKTSLVQKLIDSEYYDVKVQDTFIDTDHIKTVYDLEEGIPELLENDAKNDVINYLKEHNYVKSNSKTNNKASEKKPEISGNCIAIEDISNICLSDNNIKTVMLENGNEESNTKYVMLQNNVEESNVKFVILQSSKKDSDVQYVVVQNGDEGNNLKHIMLQTDNCKVEEPIRQNNEIVTEENEISDENMLEENVHFDDDDSEIMDESDLLPKEFGKIVNEENLKEFDIGVKNLDKPRQNKPVTRVLKIPAMMIDNSRAVSGQNKTITEDMSVYENLLEITDLTFEQQREEIFKRQERESYKNAPFKCTVCFTGFMDEYAFDRHALKHSDTSGKFECTICKIRKNKRSLLNKHLFILHSREYKCLKCDFVTRNSKSGSYFNHVRWKHFNSCVCEYCGDTFLNEQGVVNHKSLLHQSEKNVECKGPYCKECDVTFLSEDAHSKHLRVSSNHLQDESDPIPKRKEPPHVKRTYYKRRKLHRIIEKHNPVTCEQCGEESRNYRSYALHFLRRHPGLNRTQYSQKTPHICELCGKIYSNVSALLHHKWVHTGKKNYKCNHCDKSFAQKVGLRAHLSSIKEGQPTHQCPECGKVFVSANNLKRHELIHTGLPFECDICSKKLETYSRLHQHKQHTHYKIPWPKKVNQTDAYNEKRIPLCDEFVSPVDEMVMPSTSSSPCTIVPPSFQHQEYDLHTLPLDDKTGQRNRMPLLKRLLETARNERDASQAPILADEDPSSCEVEPAMVQNQMVCRVCLTVDSNMQRIGKFREVFNSVTGLLAADSESCRLPQQLCWECAARLKSAASLRRKALTSDAILRALLKTDTFIRIRDIKTINRKSNGLKTSLVQKLIDSQYYDVKIQDTFVDTDHITTEYDLEEGIPELLENNVKNDVINYLKEHNYVKSNSKTNNKASEKKPEILGNCIAIEDIRNICQSDNNIKTVMLENGNEESNTKYVMLQNNDEESNVKFVILQSSEEESDVQYVVVQNGDEGNNLKYMRVQNGDKENNLKYIMLQSDNCNVETEEPIRQNNEIVTEDNEISDENMFEENVHFDDDDSEIMDESDLLPKEFGKIVNEENLKEFDIGVKNLDKPRQNKPVTRVLKVPAMMMDNSRAVSGQNKTINEDISLYENLLEITDLTFEQQREEIFKRQEHESYKNAPFKCTVCFTGFMDEYAFDRHALKHSDTSGKFECTICKIRKKKRSLLNRHLFISHSREYKCLKCDFVTRHSVGAGAHVQFHKGVRYQCTQCPLVFNKSGSYFSHVRWKHANSCVCEYCGDTFLNEQGVVTHKSLLHQSEKNAECKGPYCKECDVTFLSEDAHSKHLRVSSKHLQDESDPIPSRKEPPHVKRAYHKQRKFRRIIEKHNPVTCEQCAEESRNYRSYALHFLRRHPGLNRTQYSQKTPHICELCGKIYSNVSALLHHKWVHTGKKIYKCNHCDKSFAQKVGLRAHLSSIKEGQPTHLCAGCGKVFVSANNLKRHELIHTGLPFECDICNKKLETYSRLHQHKQHTHYKIPWPKKVNQTDVNKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00171887;
90% Identity
iTF_00171887;
80% Identity
iTF_00171887;