Asph036231.1
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- -
- Assembly
- GCA_949699075.1
- Location
- OX453027.1:17005082-17007490[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0044 0.52 12.1 0.3 1 23 167 190 167 190 0.94 2 18 0.00013 0.016 16.9 5.3 1 23 195 217 195 217 0.98 3 18 7.5 8.8e+02 2.0 0.2 13 23 231 242 221 242 0.74 4 18 0.003 0.36 12.7 0.8 1 23 247 270 247 270 0.96 5 18 0.016 1.9 10.3 0.5 2 23 331 353 330 353 0.93 6 18 0.00045 0.053 15.3 1.0 1 23 359 382 359 382 0.93 7 18 0.036 4.3 9.3 0.7 3 21 387 405 386 406 0.95 8 18 9.5 1.1e+03 1.6 0.0 1 19 414 432 414 432 0.95 9 18 0.85 99 5.0 1.0 1 23 442 465 442 465 0.94 10 18 0.014 1.7 10.5 0.2 2 23 478 499 477 499 0.96 11 18 0.0039 0.45 12.3 1.8 1 23 505 527 505 527 0.97 12 18 0.026 3.1 9.7 3.3 1 23 563 585 563 585 0.97 13 18 0.0057 0.67 11.8 0.1 3 23 591 611 590 611 0.94 14 18 0.002 0.24 13.2 0.3 2 23 630 652 629 652 0.96 15 18 0.0033 0.39 12.5 2.7 1 23 658 680 658 680 0.98 16 18 0.0019 0.23 13.3 6.0 2 23 687 708 686 708 0.96 17 18 2.9e-05 0.0034 19.0 2.1 1 23 714 737 714 737 0.97 18 18 1.6 1.8e+02 4.1 3.4 3 23 744 765 742 765 0.95
Sequence Information
- Coding Sequence
- ATGTCAAGTCCACACTTATGTGACAGCTGCACAGAAAAGACGATACAGTCTTACCTTTTCATTCACAACACTAAACAACTATCTAAAGTCCTCAGTAACTGTGTCACAGATATTTATTCTAAAGTCATAGACATCAATGAACAACTTGATGATGATGTCAAATATGACAATGCTAATGTCATGATTGTCCTGGAAAATGACACCgaattatacaatacaattattGACATAAAATCTATGACAGAAATAGTGCCTACACCTGTGCCTATAGCTATGAAGGAAGCAGTTGTTCCTAAAATAGAAACAAAGGTTATTGAAGTACCAAAACCTATAGTGATACCGAAAATAGAAGTTGAAAGACCAAAGGAAATCGGAgtaattaaagaaagaaaggttAAACCTGATGGAACTCCAAACATAACCTTGAAAGAAGGGCATATAGTTATAAAACCTTTGAGCTCTGTCAGGAATTCAACTCAAGTCCCTCGATACAATACTTATGTATGTGCTAGTTGTCCAGAAATATTCACCACTTACAGATCATTAAAGGAACATGAAAAGGCCAAACATAAAAAATCCGTATTCCACTGTAAGCTCTGCGACAAATCTTATAACACTAGGCAATATTTAAACGTACACTACAAGACTCATTGTCAAGCTAGATGCAAGTTATGTCAAGGTATTCTACCTGAAGGAGAGCTAATGAATCATTTGAGGACCAGCCATGCCAACTTGGTTTACCCTTGCAAGTTTTGTGACCTAGTATACTACACGCAAGAATCTTTAGACACACATTTCAAAATTAGCCACTTAGTCAACGACACAAGATCTAAATCTCAATGTTTAATGTGTTTGAAGAACTTCATGGATGCCGAACTAAGGAAGCATAAATGCAAATTTTCGTGCTCCGAATGTTTTGTAATGCCTTGCATTCACTACAAGTATTTAAAGTCTTATAGAGAGCAAATTCTAAGCCTTGTTAATAAGATTAAATGCATAGATTGTGACTATGTTACGCGACGAAAGGAACATTTAATTGGGCATGTTAATAGAGAGCACTTGGATCACCATCCATTCACTTGTGCTGATTGCGGACAGCAGTTTTATACTAAGTTGAGTTTGAAGACACATATTGTACAATTCCATCAAGATCTTCTTTGTCAGCACTGTGACTTTGAATTTAAAGATATTAACACTTTGGAAACGCATAGAAAAGCTTGCAGATCTGTTAAACGGGAATTTGCTTGTGCCCGCTGTGTTGCAACATTTGATCTTGCTGAGGAATTGAAGAGCCATGACGATTTGAGGCATAATGAAGTAGTTTATGCTTGTACCCTTTGCAAGAGCAGATTTCTTACTAATATTGAACTACAAGAACATCATGCAAGAGTCCATGGAGGCATACAGTGcaagaaaagaagaaaacaCATTGAATGTTCTCTATGTGAGTTAATGTTTAGAAATATAAAGGAGTTGCTACAACATGAGAAATTGCATGACGCAAATGACGTTTACCCTTGCAAAGTCTGCTCCAAACAGTTCAAATCGTTAAtgaaattatacatacataatcaaaGGCACTACACAAAAAGAATGATATGTTCTGGTTGTAATAAAAGGGTTGCGGCATCGTTCTACCCGCAACACGCAGTTAGGTGCCCGTACAAAAGATCTGGACAATTAAATCATGTTTGTGAAACATGTGGCAAATCGTACCATCTGGAATCACTACTCCGTTTCCATCAAAGAGTACACATGGACCCCGAACCATGTCCTGAATGTGAGAAGGTTATCAAGCCCTCAAGTCTCAAAAAGCATATGGAGCAAATGCATGCAGATAGAACTGATAAGCGGACAAAAAAGTTTGCACAAGGCAAGCCATCTCTTGAATGCGAGTTATGTGGACATGCTGTGAGAAAGAAATTAGAGTTAGAAGCTCATATGAACCGGTACCATCTGAAAATCAAGCCATACGTCTGCCACATATGCAGCAAAGACTTCTGCGGTAAAATCCGTTTGAAGGAGCATGTAGCAACACATACAAATGATAATAGCTGCTTCTGCTCGGTTTGTGGAAAGAAATTTGCTAACCGTGTATGTCTGAAAATGCACTTCAGAATGCATACAGGAGAATCTCCTTACTCCTGCGATATTTGTGGGCAAAAATTCAGGTCTTCGAGTATGATGAAGACGCATCGACTGAAGAAACATTTGGAGAAGACTGTTTGCTGTCCGTTGTGTGATAGTATGTTTTTCATGGCCAGGGATATGCGGCATCACTTCAAGAAAGCTCATTGGACGTGCCGAGATGGAAGGCCATTCAATCCTAGAGATGTTGAGGAGTTATCGAAGGACCAGTATTATCTTTTTGAAGATGGCAGGCTGCCGAAAATTGCCAAAAATGCATAA
- Protein Sequence
- MSSPHLCDSCTEKTIQSYLFIHNTKQLSKVLSNCVTDIYSKVIDINEQLDDDVKYDNANVMIVLENDTELYNTIIDIKSMTEIVPTPVPIAMKEAVVPKIETKVIEVPKPIVIPKIEVERPKEIGVIKERKVKPDGTPNITLKEGHIVIKPLSSVRNSTQVPRYNTYVCASCPEIFTTYRSLKEHEKAKHKKSVFHCKLCDKSYNTRQYLNVHYKTHCQARCKLCQGILPEGELMNHLRTSHANLVYPCKFCDLVYYTQESLDTHFKISHLVNDTRSKSQCLMCLKNFMDAELRKHKCKFSCSECFVMPCIHYKYLKSYREQILSLVNKIKCIDCDYVTRRKEHLIGHVNREHLDHHPFTCADCGQQFYTKLSLKTHIVQFHQDLLCQHCDFEFKDINTLETHRKACRSVKREFACARCVATFDLAEELKSHDDLRHNEVVYACTLCKSRFLTNIELQEHHARVHGGIQCKKRRKHIECSLCELMFRNIKELLQHEKLHDANDVYPCKVCSKQFKSLMKLYIHNQRHYTKRMICSGCNKRVAASFYPQHAVRCPYKRSGQLNHVCETCGKSYHLESLLRFHQRVHMDPEPCPECEKVIKPSSLKKHMEQMHADRTDKRTKKFAQGKPSLECELCGHAVRKKLELEAHMNRYHLKIKPYVCHICSKDFCGKIRLKEHVATHTNDNSCFCSVCGKKFANRVCLKMHFRMHTGESPYSCDICGQKFRSSSMMKTHRLKKHLEKTVCCPLCDSMFFMARDMRHHFKKAHWTCRDGRPFNPRDVEELSKDQYYLFEDGRLPKIAKNA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00050237;
- 90% Identity
- -
- 80% Identity
- -