Basic Information

Insect: Asteroscopus sphinx
Gene Symbol: -
Assembly: GCA_949699075.1
Location: OX453031.1:2791652-2819676[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00034 0.04 15.6 0.8 1 23 235 257 235 257 0.99

2 11 0.007 0.82 11.5 1.5 1 23 264 286 264 286 0.98

3 11 0.055 6.5 8.7 2.6 1 23 290 313 290 313 0.90

4 11 0.14 17 7.4 4.8 1 23 320 342 320 342 0.99

5 11 0.0011 0.13 14.1 3.4 1 23 348 370 348 370 0.96

6 11 2.9e-05 0.0034 19.0 3.1 2 23 377 399 376 399 0.94

7 11 0.00097 0.11 14.2 0.9 1 21 404 424 404 429 0.93

8 11 0.0003 0.035 15.8 0.2 1 20 437 456 437 457 0.95

9 11 0.013 1.6 10.6 0.4 1 19 466 484 466 489 0.94

10 11 1.9e-06 0.00022 22.7 2.5 2 23 497 518 496 518 0.97

11 11 0.026 3 9.7 1.3 5 23 527 546 524 546 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00034	0.04	15.6	0.8	1	23	235	257	235	257	0.99
2	11	0.007	0.82	11.5	1.5	1	23	264	286	264	286	0.98
3	11	0.055	6.5	8.7	2.6	1	23	290	313	290	313	0.90
4	11	0.14	17	7.4	4.8	1	23	320	342	320	342	0.99
5	11	0.0011	0.13	14.1	3.4	1	23	348	370	348	370	0.96
6	11	2.9e-05	0.0034	19.0	3.1	2	23	377	399	376	399	0.94
7	11	0.00097	0.11	14.2	0.9	1	21	404	424	404	429	0.93
8	11	0.0003	0.035	15.8	0.2	1	20	437	456	437	457	0.95
9	11	0.013	1.6	10.6	0.4	1	19	466	484	466	489	0.94
10	11	1.9e-06	0.00022	22.7	2.5	2	23	497	518	496	518	0.97
11	11	0.026	3	9.7	1.3	5	23	527	546	524	546	0.89

Sequence Information

Coding Sequence: atgagTGAATACAACTGTTTTAGTGGGTTTGATATAAAGAACATGTGTTTGACTTGCCTCCGGATACCAGAAGAAGTATTTCCAATGACCACTTTAGAAATAGAGACCTATCAAAGTTTTACCGATaagGTTACCAATATTGATTGTGATATGAATCTCTGCTTATTATGTAGATGGATGATCAAGAAATGTTTAAAGTTCACCCAGCAGTGTCGGAAAGCTAATGAAATACTAAATCGGAGAACTAAAGTTAATACAAAACCTGATATCTTCCTTCCACAAACATCTGcctatgattttaaaataactaGCTTTGATACGCTGTACGTAGGCCCAGAGTCAACCTTAGATTTAAATGTTGAAGACAAGGTGGAATATATACCAATAGACGATTATATAGATGATGAGGATGAGTTACCTTTAGTGATGTTGCAAGATGATTATAAAAGTAGGAGGAGAAAGTCTGATAACTTAGAGACTACAGAGCTGGAAATTAAGTTAGAACCGGAAATAAAAGAAGAATGCACAGAAGACTCATACAAAAGAGTAAGAagtaaaaagaagaagaaagaagtaaaagaagGATTCTCTTCTCGGATGGTGCAGGAGACGGATGAATACgttgttattaaattaactaaAGAGCAGGTGTTATCAGAGTTAGAAGAGAAAGCCAAGGCCGAGTCTTACATAAGATCTCCGTATAAATGTGATAAGTGTGTAAAGGGGTTCAATTTTGAAGATGTGCTGCAGACTCATATGGAGAAACATACGCTGGAGCACGGTACATATCAGTGTGATATTTGCACACAATACTGCCCCAACACTGTGTCTTTGAGAGGTCACCTCAAATCACATACAACaagATATAAATGCAAACTGTGCGGCCAAGTCCGTCTCTCCCGCCAACACCTACTAGAACACCACGCGATCACTCACACGGCCGCACCTATCACGTACACTTGTGATAAGTGTCACTTTACTACCAATAAACGCACGGTAATACAGCGACACGTTAAGACGCACGCGACGAGTGAGCGACACGCTTGCCATCGATGCGGGAAACTGTTCAATACCGTAGAATCGTTGAGGGTGCATACTATGCGCCACGACGAATCAAAACGCTTACAATGTGAGCATTGCGACAAGCATTTCATATACCCGTCCTTGTTGCACAAACATATACAAGCGGTGCACGAGCGGACGGATTACTACTGCGTCGAGTGTGATGTGCGATTCAAGTCCCCGGAAAGTTTAAGACTACATTTCAAAAAAGCGAAAAGACATCGAGATTCTTCATCATAcagATACGCTTGCCCCCACTGCCCCCAGCGTTTCGTTACAACATCAACCCTCTCCGTCCACCTCTCATGCACCCACGGAGCTCCAAAACAGCATAGTTGCGAGCTCTGCCGGCGACAGTACAGCAGCCGGGAGGCGCTGCGGGCGCATGCGTGGAGAGTGCACACTCACAGGGACGCGAGGGACAGCTGCGACACGTGCGGGACTCACTTCAGTCGTAAGAGCGTGTTAAAAGTCCACATGCGGACTCACTCCGGAGAGCGTccgcatgtgtgtgtgtgcgggGCCGCCTTCACACAGAAAGCTAGCCTCAAGACACACCATGCTGCCAAGCACCAGAAAGAAGAAGACCCAATACCGAATAGGATCGAAATCACTCAAGAAGGATAA
Protein Sequence: MSEYNCFSGFDIKNMCLTCLRIPEEVFPMTTLEIETYQSFTDKVTNIDCDMNLCLLCRWMIKKCLKFTQQCRKANEILNRRTKVNTKPDIFLPQTSAYDFKITSFDTLYVGPESTLDLNVEDKVEYIPIDDYIDDEDELPLVMLQDDYKSRRRKSDNLETTELEIKLEPEIKEECTEDSYKRVRSKKKKKEVKEGFSSRMVQETDEYVVIKLTKEQVLSELEEKAKAESYIRSPYKCDKCVKGFNFEDVLQTHMEKHTLEHGTYQCDICTQYCPNTVSLRGHLKSHTTRYKCKLCGQVRLSRQHLLEHHAITHTAAPITYTCDKCHFTTNKRTVIQRHVKTHATSERHACHRCGKLFNTVESLRVHTMRHDESKRLQCEHCDKHFIYPSLLHKHIQAVHERTDYYCVECDVRFKSPESLRLHFKKAKRHRDSSSYRYACPHCPQRFVTTSTLSVHLSCTHGAPKQHSCELCRRQYSSREALRAHAWRVHTHRDARDSCDTCGTHFSRKSVLKVHMRTHSGERPHVCVCGAAFTQKASLKTHHAAKHQKEEDPIPNRIEITQEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -