Asph038331.1
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- -
- Assembly
- GCA_949699075.1
- Location
- OX453030.1:8917793-8926987[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0029 0.34 12.7 0.4 1 23 34 57 34 57 0.93 2 23 0.022 2.6 9.9 5.3 2 23 130 151 129 151 0.97 3 23 0.00014 0.017 16.8 0.5 1 23 155 177 155 177 0.95 4 23 0.054 6.4 8.7 2.0 1 23 182 205 182 205 0.95 5 23 0.84 98 5.0 1.2 1 22 212 233 212 235 0.80 6 23 1.5e-05 0.0017 19.9 1.8 1 23 242 265 242 265 0.98 7 23 0.00052 0.061 15.1 2.8 1 23 271 293 271 293 0.95 8 23 1.2e-05 0.0014 20.2 1.0 2 23 301 322 300 322 0.97 9 23 0.2 24 6.9 0.4 1 14 328 341 328 344 0.90 10 23 0.015 1.7 10.5 1.8 1 23 489 512 489 512 0.93 11 23 6.9 8.1e+02 2.1 0.3 2 23 540 562 539 562 0.92 12 23 0.12 14 7.7 3.1 2 23 585 606 584 606 0.97 13 23 9.8e-05 0.012 17.3 1.1 1 23 610 632 610 632 0.97 14 23 4.8 5.7e+02 2.6 4.5 1 23 694 717 694 717 0.95 15 23 3.1 3.7e+02 3.2 0.1 2 23 745 767 744 767 0.94 16 23 1.2 1.4e+02 4.5 5.3 2 23 790 811 789 811 0.97 17 23 0.0011 0.13 14.0 1.1 1 23 815 837 815 837 0.96 18 23 0.28 33 6.5 3.3 1 23 842 865 842 865 0.94 19 23 0.22 26 6.8 0.9 2 23 873 895 872 895 0.86 20 23 0.0005 0.059 15.1 1.0 2 23 903 925 902 925 0.95 21 23 0.16 19 7.2 1.8 1 23 931 953 931 953 0.95 22 23 4.3e-06 0.0005 21.6 1.8 1 23 959 981 959 981 0.99 23 23 0.00058 0.068 14.9 4.3 1 23 987 1010 987 1010 0.97
Sequence Information
- Coding Sequence
- ATGGGAAAAAATGAAGAGTTAAAAAGACAACAGACAAACGTCAAAGAAGTACTGATGTGTTCTAACGCAACACCTATCCTTCGTCGAGGATATATGGGCTATATGTGTTGTTACTGCGATGCACAGTACCCAGACCCTGCAGAACTAAAGAAACACACTCTAGATATACATGATGGCCTATACGATCCTGTTCCTTGGTATATTCAAAATAGATTTGATGACTATTGCATCAAGATGGATATAACTGACTTATGTTGTAAACTGTGTGATAGTGAAATGGAATCACTAGAAAAATTCTTAACACATTTAAAAGATGAACATGAAAAGGCAATATTCACAGACGTTAAAAGTCAGATCGTACCATTCAAGTTAGACAAAGACACTACGAAATGCTGCATATGCCCGACTACctttgaaaaatttaaaagtcTACTAGAACACATGCACACGCATTACAGGAATTTCATTTGCGAAGAGTGCGATATGGGTTTTGTGACCCTGGGCCATCTTAAACGACATTCTGAAAGCCACAAATTAGGTGAATTTAAATGCAAATTCTGCGCAAAAACTTTTGAAACGCACGGAAAGAGAGCAGCTCACGAGAAGGTTGTCCACGTTTATAAGAACAAGATTCACAAATGTGGATATTGTAATCAAAAGTTCGGGTCTTATATGAAAAGAAATGGGCATATAGCTGAAGTCCATGGAGTCAAATTAGATTCCTATAAGTGTCGCGCTTGTGACAAAACATTCACACGCAAAGGAGCTTTGAGTACTCACACGAGAAAGGATCATTTGATGGAACGAAAACACGAATGCAGTCAATGTGAAAAGACATATTTCTCTTCTTCTGAGCTAAAAAGACACGAAGAGCAACATGCTGAAGTAAAGAATAGGCTTAAGTGTGATGTCTGTTCGAAATCGTATGCCTCTAAGAAAACTCTGAGGGAACATATGAAGATACATAATAATGTCAGGAGGTTCAAATGTCAACATTGTGAACAAGCTTTTATTCAGAAAACTAGTGCCCAAGATAAACTTTTCGAagataacaaaacaacaaataaagTTACACCAGAAGCGAAGAAAATTAAAGAAGAACCTATTGACATTGGTGAACCTATTGCAGACACTGGAACAATTGATGTGGCAATGAAAAAGCTGAAAACTAATAAAGAGCCACTTAAAAGGCTGAGATCTAATCAAAAGCTATCTTTGATAGATAAACCTATTAAAGAtgctaaaacaaatataaacaaaGCACCTAAAATGCTAAGAATTGTTAGTAATCAAGAGCTTTCTGAAGAAGCTAAAATTAAACcaaaaagaataagaattagGAAACACACAGAGATCGGTAAAGCAAGGATAGCAAGGATGGCAGAAATGAAGAAATACCAGAATAATGTTAAAGAAATTCTAATGTGCTCCAACGCCTCGCCCTTCCGAAACGGTTATATCGGCTACAAGTGTTGCTACTGCGATTCACAGTACACAGAACCTGCAGATCTAAAAAAACATAGTAATGAAATCCATGACAATCAGGGCGATCCTGTAAGAGCAAACAACAAAAATAGGATGGATGAATATTGTGTCAAGTTAGACATTACAGATTTACATTGCAAACTTTGCGATACTCCACTGGACTCCGTTGAGAAGATCCTCGTTCATTTAAAATCTGAACACGACAAAACTATATTTACCGAAATCAATAACCAAATCATGCCATTTAAATTCAATAGTGAGACAATACAATGCTGCATCTGTTTCTATGTTGTGGATAAATTGAAATCTCTACAAGAACATATGCACACGCATTATAGGAATTTCATTTGCAATGAATGCGATTTGGGTTTCATCACCAAAGGTTGTCTCCAGCGTCATGCCCAAAGACACAAATTAGgTGACAACAAACGTAAGAACCAAACtgacacaaaaaataatgatTCTGCAACTAAGAAAAGTGTAAAagcaaattacatgaaaataagaGAAGAACTGCTTAAGCATCAGAATAATATCCAAGAGATACTCATGAGTACGAATGCTACACCTATTCTTCAATGGAGAGACGCTGGCTATGCTTGTTGCTTCTGCAAAGACCAGTACCACAACCCTGCAGATCTGAAAAAACATACGCTCAAAAATCACGAAAATCAACACAACCCAGCAGCTTCACAAGTATTAAGAAAGAAGACAGAATTTTGCGTCAAACTAGATATCACTGGCTTGCAATGTAAGCTCTGCAGTTCAAACATTGAGTCCTTAGAGGAGCTTTTAGACCATCTACAAAAGGAGcacaagaaaaatatatttagagaTATTAAAAACCAGATTCTACCCTTCAAGTTTGAAAATGAGGAGATGTCATGCTGCATCTGCTCTAACGGCTTCGAAAAGTTCAAAAAATTACAAGAACACATGCATACACACTATAGGAATTTTATCTGCAAGGATTGCGATCTAGGATTCGTTACCCGTGGCTGTCTGGTGCGTCATTCAGAAAAACACGTACTAGGCACACACAAATGCAATTTTTGCCCCAAAATCTTTGATACGATACGAAAGAAAAGATCGCACGAGAAATCTGTGCAtatatgtgtttatttattgaGTAAATGCGGGTACTGTAACGAAAGATTCACGAGTAACCTGAAGAAGGATCAACATTTGGCGAAAGTACACGGAGTCCagttacaaaaaattaaatgtagagCTTGTGACAAAACCTTTGAAAGTAAAAGGGCTTTGACTATACATACGAAAAGGGATCACTTAATGGAAAGGAAACATAAGTGTTCTCAATGCGAGATGACATTCTTTGCTTCTAATGCGCTAAAAATGCATGAGGTGAAGCATTCGGGGGTGAAGGAGTTTAAATGCGACGTGTGTTTGAAGACTTATGCAAGGAAGAAGACCTTGACTCAACACATGAGGATACATCTGGATGATAGAAGGTTCAAGTGTGAGCATTGTGGACAGGCTTTCGTCCAAAAGTGTAGTTGGAGAGGACATATGAAGAACAGACACGGGGAATATGTTTGA
- Protein Sequence
- MGKNEELKRQQTNVKEVLMCSNATPILRRGYMGYMCCYCDAQYPDPAELKKHTLDIHDGLYDPVPWYIQNRFDDYCIKMDITDLCCKLCDSEMESLEKFLTHLKDEHEKAIFTDVKSQIVPFKLDKDTTKCCICPTTFEKFKSLLEHMHTHYRNFICEECDMGFVTLGHLKRHSESHKLGEFKCKFCAKTFETHGKRAAHEKVVHVYKNKIHKCGYCNQKFGSYMKRNGHIAEVHGVKLDSYKCRACDKTFTRKGALSTHTRKDHLMERKHECSQCEKTYFSSSELKRHEEQHAEVKNRLKCDVCSKSYASKKTLREHMKIHNNVRRFKCQHCEQAFIQKTSAQDKLFEDNKTTNKVTPEAKKIKEEPIDIGEPIADTGTIDVAMKKLKTNKEPLKRLRSNQKLSLIDKPIKDAKTNINKAPKMLRIVSNQELSEEAKIKPKRIRIRKHTEIGKARIARMAEMKKYQNNVKEILMCSNASPFRNGYIGYKCCYCDSQYTEPADLKKHSNEIHDNQGDPVRANNKNRMDEYCVKLDITDLHCKLCDTPLDSVEKILVHLKSEHDKTIFTEINNQIMPFKFNSETIQCCICFYVVDKLKSLQEHMHTHYRNFICNECDLGFITKGCLQRHAQRHKLGDNKRKNQTDTKNNDSATKKSVKANYMKIREELLKHQNNIQEILMSTNATPILQWRDAGYACCFCKDQYHNPADLKKHTLKNHENQHNPAASQVLRKKTEFCVKLDITGLQCKLCSSNIESLEELLDHLQKEHKKNIFRDIKNQILPFKFENEEMSCCICSNGFEKFKKLQEHMHTHYRNFICKDCDLGFVTRGCLVRHSEKHVLGTHKCNFCPKIFDTIRKKRSHEKSVHICVYLLSKCGYCNERFTSNLKKDQHLAKVHGVQLQKIKCRACDKTFESKRALTIHTKRDHLMERKHKCSQCEMTFFASNALKMHEVKHSGVKEFKCDVCLKTYARKKTLTQHMRIHLDDRRFKCEHCGQAFVQKCSWRGHMKNRHGEYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -