Asph038332.1
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- -
- Assembly
- GCA_949699075.1
- Location
- OX453030.1:8927142-8945501[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.077 9.1 8.2 0.1 1 23 81 104 81 104 0.93 2 19 0.00088 0.1 14.3 0.6 1 23 204 226 204 226 0.98 3 19 1.7 2e+02 4.0 7.0 1 21 231 251 231 254 0.91 4 19 0.022 2.6 9.9 1.3 2 23 262 284 262 284 0.91 5 19 0.00024 0.028 16.1 2.6 1 23 291 314 291 314 0.98 6 19 0.012 1.4 10.8 4.1 1 23 320 342 320 342 0.96 7 19 1.3e-06 0.00016 23.2 1.2 1 23 348 370 348 370 0.99 8 19 0.013 1.5 10.7 0.9 1 14 376 389 376 390 0.92 9 19 2.5e-05 0.003 19.2 0.3 1 23 458 481 458 481 0.98 10 19 0.12 14 7.6 2.1 1 23 571 594 571 594 0.94 11 19 0.34 40 6.2 0.3 2 23 621 643 620 643 0.95 12 19 0.091 11 8.0 0.9 2 23 666 687 665 687 0.92 13 19 0.00062 0.073 14.8 0.3 1 23 691 713 691 713 0.95 14 19 0.00037 0.044 15.5 0.6 1 23 718 741 718 741 0.97 15 19 0.062 7.3 8.5 0.4 2 23 749 771 748 771 0.88 16 19 0.00098 0.12 14.2 1.2 2 23 779 801 779 801 0.96 17 19 0.00076 0.089 14.5 2.9 1 23 807 829 807 829 0.97 18 19 4.5e-06 0.00053 21.5 0.9 1 23 835 857 835 857 0.99 19 19 0.069 8.1 8.4 5.9 1 23 863 886 863 886 0.98
Sequence Information
- Coding Sequence
- ATGAGAGGGCTGCAAAGTGATGGTAAACAAGAAAAAGTGACAGTGACAAGTAAATACAAAAAAGAGCCGGCGGTATTAGTAATAGTAGAGCCAAAGAAGAAGACTGCCAGAAGGATAGAAGTTCAGTCAGTTCAGTCCAAGATGAACTTGCAAAAAGAATACGAGAAACATCAACACAACCTTAGAGTGATCTTGCAATCCACTAACGCTACTCCGATCCTTCGTCGAGGAGGCGTAGGATACATGTGCAGTTACTGCGTCCAAGAATTCCCAGAACCTTTAGATTTAAAGGAGCATACCTTAGCAGAACACATAGCCAATAAAACAGATCCTACGACTGGCTATCGTAAAACGTCCGTCATGCAGGACTATATGATCAAACTTGACATTACTTACCTTAGTTGCGAGTTGTGCTGTGCCTCAATATCTTCCCTAAAAGATTTAGTAGTCCATCTGACAGAAAAACATGACTTAACTCTACACAGTGACATAAAAAATCATATCATGCCTTTCAAATTTGACACAGACCAACTTACATGCTGCCTCTGCTTCAACGTTTACGACAAGTTCAAAAAGCTACAGGAGCATATGCATAAGCACTATAGGAACTACATTTGTGATGTCTGCGAATCTGGGTTTGTCAATCAGGGCTGTTTGAAACGTCATACTGCCACTCACTTGACTGGGATCTATCCCTGCTCGCATTGTTCCAAAGTCTTCGATACTCATGTAAAGAAGAAATCTCACGAGAGATGCTTCCATACACACAATGATGTCTTAAATAGATGTGGCTATTGCAATAAAGGTTTCAGAGACCACAAGTATAAAGAGCTTCACATGGTTGAAGTTCATGGCGTACAAAGAGCAGAATATAAGTGTAATGCTTGTGATAAATGTTATGCTACAAATAAGAGACTGCAGATACATGTGAGAAGAGATCATTTGCTGGAGAGAAAACACATATGTCCTCATTGTGACATGAAATTCTTTAACTCTCGCGACAAAAATATGCATATGGTAACGCATACAGGAGAAAAAGAATTTCAGTGCAAAGTTTGTCTCAAGGCTTTTAATAGGAAGTCTACTTTGACTGGCCATATGAGGATTCATAATAATGATAGAAGATTTAAATGTGAACACTGTGGGATGTCCTTTGTGCAGAAGTATGATGAAGACGAAGAAACCATCGAAAATGAAATGGAAAATATAGAGCTGGCGCCTATAGCTGTCGTAAAGTTTGAAATGCCAGACGAGAAAGAGACAGAAGCATCGGTACTCACCTTCCCAGAAAAATTACAAAAGCACAGACATAATCTCAGAATGATAATAAGTTGTACTAACGCTACTCCGATTCTTGGCGGAAATGAAGGGTTTCAGTGCAGGTATTGCCCAAAAGAGTTCCAGAGCTCAATTGATTTGAAGATACACATTTTGACGGGGCACTCAGCAACAAGAGCGACAATAGATGATTACAGGGTCAAACTCGATATAACTAACCTGAGTTGCATGATCTGCAGTGATCAACAAAAAAGCATTTTGGAAAAAGGAATTGATGACCTAGAGGACGAAAGTTTGGATGAAGTAGACTTACACATTGACACGGAACACAAAATAACGCCGAGAACAGAACTGTTAAAACATCGGAGTAATATTAAAGAAGTACTATTAAATTCGAATGCAACACCTATAAGACGGTACGGAGGAATCGGATACACATGTTGTTACTGCAAAGACCAATATAAAGTTCCTGCAGACCTAAAGAAACATACCCTAGAATTACATGATAACATTTTAGATGCTAATTTCTTGAAGAATATGAATATGTCCGAATATGTCGTCAAATTAGACATTACAGCACTGAAATGCAAGCTTTGCAACACTGATATGGATTCTCTAGATTCCTTAACAGATCATCTTCAAAACATACACGAGAAGCAAATCCATAATGCCTACAAAAATCACATCTTTCCATTTAAATTCGATAGCGAGCTCCTCAAATGCATTATTTGTTTAAACTCCTTCAGTAAATTCAGGACGCTTGTCCGACACATGAATATACACTACAGAAATTACATATGCAGAGTTTGCGATACCGGATTTGTAAACCGAAATTCACTAACACAACATTTGGTTAATCACAAAACTGGCCAATTCGTTTGCGATTACTGCCCAAAAGTCTACACGACATCAGTGAAGAAACGACTGCATGAAAGAACTGCTCACACTCATGTAGATGAAGCTAATAAATGTGGTTATTGTAACGAAACTTTTAaagattatataaaaaaagaaacacatttagCTGAAGTACATGGAGTAGAATCCATAATACCTAAATGTCAAGCTTGCGACAGAGTATTTAAAACACGAAAGATGCTAAGTATACACGTAAAAAGAGACCATTTGATGGAAAGGTCTCATAAATGTACTGAATGCGAGATGACGTTTTATTCGACGACCGGTTTGAAGAATCATATGGTGAAACATACAGGGCTGAAGGAGTATCAGTGTTCAGTCTGCCTCAAGTCCTATGGAAGGAAGAAGACCCTAAATGCACATATGCGTATCCATGAAGAGAGGAAGAGGTTCAAATGTGAACAATGTGCGCAAGATTTTGTTCACAAATGCACCTGGAAAAGTCATATGAAGTCTAAACATGGAGAGATTGTGTAA
- Protein Sequence
- MRGLQSDGKQEKVTVTSKYKKEPAVLVIVEPKKKTARRIEVQSVQSKMNLQKEYEKHQHNLRVILQSTNATPILRRGGVGYMCSYCVQEFPEPLDLKEHTLAEHIANKTDPTTGYRKTSVMQDYMIKLDITYLSCELCCASISSLKDLVVHLTEKHDLTLHSDIKNHIMPFKFDTDQLTCCLCFNVYDKFKKLQEHMHKHYRNYICDVCESGFVNQGCLKRHTATHLTGIYPCSHCSKVFDTHVKKKSHERCFHTHNDVLNRCGYCNKGFRDHKYKELHMVEVHGVQRAEYKCNACDKCYATNKRLQIHVRRDHLLERKHICPHCDMKFFNSRDKNMHMVTHTGEKEFQCKVCLKAFNRKSTLTGHMRIHNNDRRFKCEHCGMSFVQKYDEDEETIENEMENIELAPIAVVKFEMPDEKETEASVLTFPEKLQKHRHNLRMIISCTNATPILGGNEGFQCRYCPKEFQSSIDLKIHILTGHSATRATIDDYRVKLDITNLSCMICSDQQKSILEKGIDDLEDESLDEVDLHIDTEHKITPRTELLKHRSNIKEVLLNSNATPIRRYGGIGYTCCYCKDQYKVPADLKKHTLELHDNILDANFLKNMNMSEYVVKLDITALKCKLCNTDMDSLDSLTDHLQNIHEKQIHNAYKNHIFPFKFDSELLKCIICLNSFSKFRTLVRHMNIHYRNYICRVCDTGFVNRNSLTQHLVNHKTGQFVCDYCPKVYTTSVKKRLHERTAHTHVDEANKCGYCNETFKDYIKKETHLAEVHGVESIIPKCQACDRVFKTRKMLSIHVKRDHLMERSHKCTECEMTFYSTTGLKNHMVKHTGLKEYQCSVCLKSYGRKKTLNAHMRIHEERKRFKCEQCAQDFVHKCTWKSHMKSKHGEIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -