Asph003644.1
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- -
- Assembly
- GCA_949699075.1
- Location
- OX453003.1:5923034-5934401[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 8.5e-05 0.01 17.5 0.4 1 23 203 225 203 225 0.98 2 29 0.00044 0.051 15.3 0.3 2 20 269 287 268 289 0.93 3 29 7.6e-05 0.0089 17.7 0.2 2 23 319 341 318 341 0.96 4 29 0.00047 0.056 15.2 0.8 1 23 389 412 389 412 0.97 5 29 0.019 2.2 10.1 0.6 1 23 432 454 432 454 0.97 6 29 0.00027 0.032 15.9 0.9 2 23 495 517 494 517 0.93 7 29 0.1 12 7.8 3.7 2 23 558 580 558 580 0.97 8 29 0.0025 0.29 12.9 0.6 1 23 630 653 630 653 0.97 9 29 0.02 2.3 10.1 0.1 1 23 706 728 706 728 0.97 10 29 0.0083 0.98 11.3 8.6 1 23 739 761 739 761 0.98 11 29 0.011 1.3 10.9 1.2 2 23 773 794 772 794 0.96 12 29 0.0033 0.39 12.5 1.4 1 23 804 826 804 826 0.98 13 29 0.0079 0.93 11.3 6.2 1 23 855 877 855 877 0.96 14 29 0.012 1.4 10.8 2.4 1 23 888 910 888 910 0.97 15 29 2.6e-05 0.0031 19.1 0.5 1 23 918 940 918 940 0.98 16 29 0.00076 0.089 14.5 0.2 2 23 960 982 959 982 0.97 17 29 1.1 1.3e+02 4.6 0.9 1 23 1000 1022 1000 1022 0.91 18 29 1.5 1.7e+02 4.2 5.3 1 23 1029 1051 1029 1051 0.95 19 29 0.0046 0.54 12.1 3.2 2 23 1062 1084 1061 1084 0.95 20 29 0.0032 0.38 12.6 0.1 2 23 1107 1128 1106 1128 0.95 21 29 8.6 1e+03 1.8 0.3 2 20 1132 1150 1131 1151 0.86 22 29 3.9 4.6e+02 2.9 5.6 2 23 1171 1193 1170 1193 0.95 23 29 0.0064 0.75 11.6 0.2 2 23 1209 1230 1208 1230 0.95 24 29 1.9 2.2e+02 3.9 3.0 5 23 1240 1258 1238 1258 0.94 25 29 0.015 1.8 10.4 0.8 2 23 1269 1291 1268 1291 0.94 26 29 4.9 5.8e+02 2.6 6.1 2 23 1308 1326 1308 1326 0.87 27 29 2.1 2.5e+02 3.7 2.1 2 22 1330 1350 1329 1350 0.94 28 29 0.2 24 6.9 0.5 2 23 1399 1420 1398 1420 0.93 29 29 0.0035 0.42 12.4 0.5 2 23 1431 1453 1430 1453 0.95
Sequence Information
- Coding Sequence
- ATGGCCCTCAAGCTTGGAAAATGCAGGCTCTGCCTCAAGCTCGGAGACTTTTACTCCATTTTCACGGTGGACAATGCTTTGCAGCTCGCGGAGATGGCAATGGAATGCGCCCGGGTGAAAATATACGAAGGCGATGGGCTACCTGATAAGGTGTGCTCAGAGTGCATACAAAAACTCAGTGGCGCCTATATTTTCAAACAGCAGTGTGAGCGAGCTGACCAGGAGCTTCGCCGCAACCATGTGCCGCCACCGGGATTCAGTATTAGTCCGCCGCCACCCAACAGGCAGAGTAGCGACTCGGCCTTTTCAAATCATACCGACAGTTCCAACCTGACCAAACCCCCATCTTCCATTGAAGAGAAAGTAACCCCTGCCACTAGAATCAGGAAACGTAGTATAGATAGCGTCGACAATGCATCCACTGGCGGCGCCTCCAGTGACTACAGACCCAGTGGCTCCAAACGCGTCGAGGAACTCAGAAGAACCAAAAAAAGACCTAGAAAGCTATCTGATCACGTATCTCAGTTAGATTCAGATTACGAAGACAATAACAGCGCCTCGTACTTAGGCGAAACAGATTCTGACGAGCCCTTACTTAAAAACAGTTTCCCATGCGAAAACTGTCCTAAGCAATTCCCGTCTAAGAGGAGTCTTATTAACCACAACAGGATACACGAAAAAAAAGAGGGTCTTGGTGAAAACGCCGTCGTTGATATACCGCCAAAGACTATACCGCAAAAGACTACACCGCAAAAGACTATACCGCAAAATACAGAGGATGCGGCTGATGTAGAGGACAAATTGAACTGCGAAAAATGTGGAAAGACATTCAAGTTGAAGATCATGTTGAAACGTCACCTCGACTTATGCGGGAAGACGAGTCCCGTCAAGTCGCCGCAGAAAGAGTTGTTCGTGTCCTTGGAACCGATCGACGGCGTTAAGAACAGGAACATTGTGTGCGAAATGTGCTCGGCCAAGTTCAAGTCTTACGACAATTTAGCAAAGCATATGAAGGTTGTTCATGCTGCTGTCTTAAAAAGAGAAGATAAACAAGAGAATAGGAAAGTGGCAGTTCCGTGCCTCTACTGCCACCAGCAATTCGACGATTATTACATTCATAGTGCGCATTTCGGTGTGTGCCCTAAGAAGGACGATTCTTTACCATTTGAATGTCCCGTTTGTAAGAAGGTGATGTCGAGGAAGGCTTCTTATTACAAGCATATTAGGAATATGCATTTTGAGCCTCGGATGTTGCCAGGGAAGGCTTCGCTGGAGCCCGAGACTGGGGAGTACCATGAGTGCAGGATGTGTTCAATGAAGCTTGCCTCGCAAGAGTTACTGATCAAGCATTTAGCAACACATATGTCACACATTGAAGACAATGATGGTGCAGCTGACAACGAATCTAGAGGTAGCACCATGGACGATTCAGCATCTATCCAATCGGTGCCAAGTCAGTCTCACACTCCAAGCAGTCTACTGAAATGTACATTGTGTGACAAAGAGTTCAAATACAAGAAAGCTCTCCAGACTCATGAGGCAAAAGTTCATTCTGAGGTGCCTGTAGAATTGAAGGTGGAGCCTCCGGATAAGCCGTCCACGAGTTTCTTGAGCGAGGCTTCAGTCTACCGGCAGACTGAATCAGAATCTAGTCAAGAAGAGGATGACAATACCTGCGACATTTGTGAGAAACAGTTCTCGTATCGGCGGATTCTACTCCACCACAAGAGGACTAAACACAACATGAGCTCGGGCCACAAGCGCGCCAAGATCTACCTCAAGGACTGCTCCGTCCGCTGCCTCATCTGCGACCTCGATATGAAGGTCGGTGCGATCAATGAGCACAACCAGACACATATATCAAAGAATATGAAGCCTAGGAACGTATATACATGCGCTGAATGCGAGGATACCTTCAAGAGCTGTTCCGCACTCGCAAACCACATTAAACTGATTCACAGATTAAAACAGAAGAGGATTGAAGACACTATTAACCCATCGGATTTTTGTGAAGTCGTTGTGACGAAAGCGGAACCCCTGGACGATATCCAGAGTCACAACGACTTTGGTGAGGTTCCAGGCGCAGAGACCAAGCCGCTGGTGGATCTTAGTGGCTTTACCTGTCCTATCTGTGCCAAAAAGATGCCGACCCTCATCTCTTTGAAGAGGCACGTCAACTGGCACTCGAATGTCGGCAACAGTATAGAGAAGAAGTATGAGTGCTGTGTCTGCAATGAGTCATTCAAGTTCCAATGCCACTACAAGATCCACATGCGCGAGCACTACCGCGACACTAACCTGGACGCCAAGCACCTGACGTGCACCATCTGCGGCCGCGTCAGCAAACACCTGCGCGCCGCACAGATGCACATGAAGTACCACAGCCAGACGCGCTTCCAGAACAAGGACTACCAGTGCTCCATCTGCGAGCGAGTATTCCAGCACAGGAAAGTATACCTCTCCCATATGGCGATACATTACAAAAAGGGCGACAGCGTCCAGAACACTATTGTAGGTGACGCCTTACCCTTAAGCGCTGATAAAACTATCTTCGACGGAACTCACACTTGCCATCTTTGTGGCAAAGTCTGCGACTCTGAGAATTCCCTAAAGCACCACCTAATCTGGCACAACTCCAAAACCTTTCTGTATGGCGCCCGACACGAGTGCAGCATTTGCAAAGTGAAGTTCACAAACAAAAGACGACTAGACATTCACACCAGAGCTCACTACGAAGACGACAATGGCCCCtacaagtgtaccatctgcggcAAAGGGTACACTGACGAGGGATACTACCAGAAACACGTGAAAGGACACAACTTCGATCATCAGTCCCACAAAAAGAGGATTGATAAAATTAGAAAGGATAAAGTCAAGTGTCCAATATGTTCTCGGTATTACCCTGACTTAGTGAAGCTTATCCGACACTTGAGGCGGACGCATCCCGAAAGTAAGATGATCAAATCGGACCCTGATGCACCCCCGCAACCGTATTATTCCTGCAAATTGTGCGCCAAAGTATTTTTAGACGAGCGAAGACTACAACATCATGAAGAAGCTCACCTAAGGAAGCCAGAATTCTTCAAATGCAAGTTTTGTGGTAAGAAAACCATATCACTTAGGAATCACCACATCCACATTAAGGGTCATTTAGCACAAAAACACTTTGAATCTCCGCTGAAGTGTCCGCATTGTGACGAGAAGTTCGTGAAAGGTTATGCGCTCCACCATCACCTGCGCGACGTACACAACATCCTTGAGACTTGGATCGCAGATCGCACAGAGCAGACACTCAGCGGACCACTGAAAGACCTCCAGTGCTCCATTTGTCTGAAAGTGCTCGCCAGCAAAGGAAACTACGAGCGACACATCGACTATCATAACTCTTTGAGATGTAACTACTGCTTCGATTTCTTCAGCTCTCTTCGATTCCTAGAGGGTCATCTAGCGTTCTCGTGCGAAAAGAAAAAGCTTTTAGGCGACACTGAAACATACCCTAAGAAAGTGAAATGCCACATTTGTTACAAAGCATTCCATGTTCAAGTCAAACTGGACTGCCATTTGCGCACGCAACACGGCATCGTAGTTAACAGGGAAGCCTCAACAGGAAAGCAAGAGATTGTCTGTGATTATTGCTTTAGAGTTTTCGAAAACGAGTATGCTCTCTCTACTCACAAAATTTACCATCGCACCATTGGCTATCTCGGGTGCATTTATTGCAGTAGGAAGTTTAACACAATGACGTTGTATCGAAAACACAAGAATTACCATTTTGCGCAGATCAATGTGGATAACCCGACGAAATGCGAACATTGTGACGAGACGTTCGTACCCTTCAGGGAAATGATATACCACATGAAGGACGTACACGGAGATGACAAGGAATGGGTGGTTCAGCCCAAAGAGTCCATTGAGGAGACCTGCCACATCTGtaacaaaaagttttttaatcTGCACAAACATTTGGCGTACCACGAGGAAAACAAATGCAAAAAATGCAGTGAATACTTCTACTCTATGGCAGACTTCGATAATCATCTTTGTACCATTGAGAGTGATGATGAAGGCACTGGATACATAGGCAACGAAGAAGCGCCTAAATACGAGGAGTGCAAGTTCTGCTTCAAACCGACCACCAAGAAGAGTTCCAAGCGGATGCACAATCATATACATAAGGGATCGGGCTCTATATCCTGTAGGTTCTGCCCCCTTAAGTTTAAAACTATGGACGCCTTCAACATACACGCTTTCTCCCATCGCAGCAGGAAATACAACAAGAAACCGATAAAGTGTAGGAAATGTGGCGAGAAGTTCGTTAAATATGGGCCATTTATAAAGCATATGAAATTGGTTCACAAATCATTGAAAAAGATTCACTATAGAGCGATGGTGAAGCCCGAGAAATGTGTCGTTTGTGGAGATGACTTCCCCAATCTGCATAATCATTACCGCGCTCATTTGCTGAATCAATGTCAGGGTTGCCTGAAGTACTTTACTTCATACAAAGTATTCTCTTTGCATGAATGCAACAAAGAGGACTCTGACCCTTCAAAGGTGTTTACATCTGACGCAAACTTGAACGAGCTGATAAATACTTATGTTCCGAAGGACGAGAAAGATGATGAGAAATACTATGGCCACACTGACGACGAGGAAGACGATGTGGACCCAGCACCCGTATTTGCGGAAGAAGAAAGTCAGGAATATAAGGACATACCTATGATCCAGTCGCCAATAATATCGGATGTTCTGTCGCTTTTCAAGATGGAAACAAATGGAATGGATGGGATGGACGTCGTGGAGGATGATGAAATAGTCAATATAACTGACGATGACTCTATGGACATTGACACTGCTATGCCAGTTGTTGTGGtcattgatgatgatgattga
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNALQLAEMAMECARVKIYEGDGLPDKVCSECIQKLSGAYIFKQQCERADQELRRNHVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKPPSSIEEKVTPATRIRKRSIDSVDNASTGGASSDYRPSGSKRVEELRRTKKRPRKLSDHVSQLDSDYEDNNSASYLGETDSDEPLLKNSFPCENCPKQFPSKRSLINHNRIHEKKEGLGENAVVDIPPKTIPQKTTPQKTIPQNTEDAADVEDKLNCEKCGKTFKLKIMLKRHLDLCGKTSPVKSPQKELFVSLEPIDGVKNRNIVCEMCSAKFKSYDNLAKHMKVVHAAVLKREDKQENRKVAVPCLYCHQQFDDYYIHSAHFGVCPKKDDSLPFECPVCKKVMSRKASYYKHIRNMHFEPRMLPGKASLEPETGEYHECRMCSMKLASQELLIKHLATHMSHIEDNDGAADNESRGSTMDDSASIQSVPSQSHTPSSLLKCTLCDKEFKYKKALQTHEAKVHSEVPVELKVEPPDKPSTSFLSEASVYRQTESESSQEEDDNTCDICEKQFSYRRILLHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDLDMKVGAINEHNQTHISKNMKPRNVYTCAECEDTFKSCSALANHIKLIHRLKQKRIEDTINPSDFCEVVVTKAEPLDDIQSHNDFGEVPGAETKPLVDLSGFTCPICAKKMPTLISLKRHVNWHSNVGNSIEKKYECCVCNESFKFQCHYKIHMREHYRDTNLDAKHLTCTICGRVSKHLRAAQMHMKYHSQTRFQNKDYQCSICERVFQHRKVYLSHMAIHYKKGDSVQNTIVGDALPLSADKTIFDGTHTCHLCGKVCDSENSLKHHLIWHNSKTFLYGARHECSICKVKFTNKRRLDIHTRAHYEDDNGPYKCTICGKGYTDEGYYQKHVKGHNFDHQSHKKRIDKIRKDKVKCPICSRYYPDLVKLIRHLRRTHPESKMIKSDPDAPPQPYYSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLRNHHIHIKGHLAQKHFESPLKCPHCDEKFVKGYALHHHLRDVHNILETWIADRTEQTLSGPLKDLQCSICLKVLASKGNYERHIDYHNSLRCNYCFDFFSSLRFLEGHLAFSCEKKKLLGDTETYPKKVKCHICYKAFHVQVKLDCHLRTQHGIVVNREASTGKQEIVCDYCFRVFENEYALSTHKIYHRTIGYLGCIYCSRKFNTMTLYRKHKNYHFAQINVDNPTKCEHCDETFVPFREMIYHMKDVHGDDKEWVVQPKESIEETCHICNKKFFNLHKHLAYHEENKCKKCSEYFYSMADFDNHLCTIESDDEGTGYIGNEEAPKYEECKFCFKPTTKKSSKRMHNHIHKGSGSISCRFCPLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCGEKFVKYGPFIKHMKLVHKSLKKIHYRAMVKPEKCVVCGDDFPNLHNHYRAHLLNQCQGCLKYFTSYKVFSLHECNKEDSDPSKVFTSDANLNELINTYVPKDEKDDEKYYGHTDDEEDDVDPAPVFAEEESQEYKDIPMIQSPIISDVLSLFKMETNGMDGMDVVEDDEIVNITDDDSMDIDTAMPVVVVIDDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00785388;
- 90% Identity
- -
- 80% Identity
- -