Asph037905.2
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- -
- Assembly
- GCA_949699075.1
- Location
- OX453030.1:2196568-2212702[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.00037 0.044 15.5 0.7 2 21 109 128 108 129 0.94 2 28 0.56 66 5.5 0.0 2 23 135 157 135 157 0.95 3 28 0.069 8.1 8.4 1.6 3 23 164 185 163 185 0.97 4 28 0.00013 0.015 16.9 0.9 2 23 191 212 190 212 0.96 5 28 1.4 1.7e+02 4.2 1.0 2 20 216 234 216 236 0.91 6 28 5.2e-06 0.00061 21.4 1.2 1 23 262 285 262 285 0.95 7 28 0.0039 0.46 12.3 0.6 1 23 291 313 291 313 0.95 8 28 0.12 14 7.7 0.1 1 23 319 341 319 341 0.97 9 28 0.22 26 6.8 0.3 1 23 347 370 347 370 0.93 10 28 0.00037 0.044 15.5 0.7 2 21 488 507 487 508 0.94 11 28 0.56 66 5.5 0.0 2 23 514 536 514 536 0.95 12 28 0.069 8.1 8.4 1.6 3 23 543 564 542 564 0.97 13 28 0.00013 0.015 16.9 0.9 2 23 570 591 569 591 0.96 14 28 1.4 1.7e+02 4.2 1.0 2 20 595 613 595 615 0.91 15 28 5.2e-06 0.00061 21.4 1.2 1 23 641 664 641 664 0.95 16 28 0.0039 0.46 12.3 0.6 1 23 670 692 670 692 0.95 17 28 0.12 14 7.7 0.1 1 23 698 720 698 720 0.97 18 28 0.22 26 6.8 0.3 1 23 726 749 726 749 0.93 19 28 0.00037 0.044 15.5 0.7 2 21 867 886 866 887 0.94 20 28 0.56 66 5.5 0.0 2 23 893 915 893 915 0.95 21 28 0.069 8.1 8.4 1.6 3 23 922 943 921 943 0.97 22 28 0.00013 0.015 16.9 0.9 2 23 949 970 948 970 0.96 23 28 1.4 1.7e+02 4.2 1.0 2 20 974 992 974 994 0.91 24 28 5.2e-06 0.00061 21.4 1.2 1 23 1020 1043 1020 1043 0.95 25 28 0.0039 0.46 12.3 0.6 1 23 1049 1071 1049 1071 0.95 26 28 0.12 14 7.7 0.1 1 23 1077 1099 1077 1099 0.97 27 28 0.22 26 6.8 0.3 1 23 1105 1128 1105 1128 0.93 28 28 0.00054 0.063 15.0 0.8 2 23 1135 1157 1134 1157 0.95
Sequence Information
- Coding Sequence
- ATGAAAGAAGAATGCCTAATACCAGAGGGCGCATGCGTTGCCTGCGCAAGCACAGCCCTCGCCGCGCAAGAGTTCCGCCTCTTCGTCCGGAACTCTGAGAGATTGTGGCGAGAATCTATCACCAACCTTTCTATACTACCCACTTCAGCCGTCCCTCCCGTCAAAACAGTGTGCGCGTTCTTCAAAACATCAGACCTCTCGGTTCAAACCTTTAAAGATTACAACACCACTGACCCGAAAACGATTTTAAATCGATTAAGAAATAGAGTCGCTAAAAAACCCACTGAAAAGAAAGCTCGAGGCGCGCGCACGGGGCCGTCATGCAGCTGCCCAGATTGTGGGAAAAGCTTCCTTAGTCCGTACTACTTAAATATGCATTTACGAAACAGTGGTCAGAAGGAGGTGTGTCTAATTTGCGGATCAGTCCTAGCCAGAGGAAAAGAATTGAAGGAGCATCTATCATCTGTACATAATGAAATTGCATTACTATGCAACAAGTGCCCAATCTTATGCACAAATGAAATACAGTTAAAAAAACACGTAAAAAAAGCTCATAAGGGAGGCGCTTTGACGTGTACTGATTGTGGTAGGACGTTCCAAAGAAATGCTTCCTTCGAAAGTCATTCGCAAATGCATGCAGTCAGGACTTGTAGGGCATGCGGAGTACAGTTCACGAACAGAGGATGTTATAGGGAACATAGATCTCTATGTGAACCGAACGCAAAGCCTAATGCTCAAAACATGCCTCGAAATCGTCGTTCCAACATACGCGACCCCGCCACCTTCACCTGCGATCATTGTGGCAAAACATACAACTCTAGGCCCCAACTCAAAAATCACATACTCTGGATACATATGGACATTAGACCTCATCAATGTCAGTGGTGCGAAAAGAGGTTTTACACTCCCGCACGCTTGGCAGAACACACTGTTGTCCATACGCGCGTTAGAAAATTCGAATGTGACATTTGTGGCGCGAAACTCGTTTCCAAAATGGCCGCCGTTTACCATAGACGACGACATACTGGCGAACGACCTTATGAATGTGAAGATTGTGGAGATAAGTTTATTTCGGCGTCTCGCAGATCGGAACATGCTAAACGCAGGCATAACAAAGGCTATAGGTTACCGTGCATGATGAAAGAAGAATGCCTAATACCAGAGGGCGCATGCGTTGCCTGCGCAAGCACAGCCCTCGCCGCGCAAGAGTTCCGCCTCTTCGTCCGGAACTCTGAGAGATTGTGGCGAGAATCTATCACCAACCTTTCTATACTACCCACTTCAGCCGTCCCTCCCGTCAAAACAGTGTGCGCGTTCTTCAAAACATCAGACCTCTCGGTTCAAACCTTTAAAGATTACAACACCACTGACCCGAAAACGATTTTAAATCGATTAAGAAATAGAGTCGCTAAAAAACCCACTGAAAAGAAAGCTCGAGGCGCGCGCACGGGGCCGTCATGCAGCTGCCCAGATTGTGGGAAAAGCTTCCTTAGTCCGTACTACTTAAATATGCATTTACGAAACAGTGGTCAGAAGGAGGTGTGTCTAATTTGCGGATCAGTCCTAGCCAGAGGAAAAGAATTGAAGGAGCATCTATCATCTGTACATAATGAAATTGCATTACTATGCAACAAGTGCCCAATCTTATGCACAAATGAAATACAGTTAAAAAAACACGTAAAAAAAGCTCATAAGGGAGGCGCTTTGACGTGTACTGATTGTGGTAGGACGTTCCAAAGAAATGCTTCCTTCGAAAGTCATTCGCAAATGCATGCAGTCAGGACTTGTAGGGCATGCGGAGTACAGTTCACGAACAGAGGATGTTATAGGGAACATAGATCTCTATGTGAACCGAACGCAAAGCCTAATGCTCAAAACATGCCTCGAAATCGTCGTTCCAACATACGCGACCCCGCCACCTTCACCTGCGATCATTGTGGCAAAACATACAACTCTAGGCCCCAACTCAAAAATCACATACTCTGGATACATATGGACATTAGACCTCATCAATGTCAGTGGTGCGAAAAGAGGTTTTACACTCCCGCACGCTTGGCAGAACACACTGTTGTCCATACGCGCGTTAGAAAATTCGAATGTGACATTTGTGGCGCGAAACTCGTTTCCAAAATGGCCGCCGTTTACCATAGACGACGACATACTGGCGAACGACCTTATGAATGTGAAGATTGTGGAGATAAGTTTATTTCGGCGTCTCGCAGATCGGAACATGCTAAACGCAGGCATAACAAAGGCTATAGGTTACCGTGCATGATGAAAGAAGAATGCCTAATACCAGAGGGCGCATGCGTTGCCTGCGCAAGCACAGCCCTCGCCGCGCAAGAGTTCCGCCTCTTCGTCCGGAACTCTGAGAGATTGTGGCGAGAATCTATCACCAACCTTTCTATACTACCCACTTCAGCCGTCCCTCCCGTCAAAACAGTGTGCGCGTTCTTCAAAACATCAGACCTCTCGGTTCAAACCTTTAAAGATTACAACACCACTGACCCGAAAACGATTTTAAATCGATTAAGAAATAGAGTCGCTAAAAAACCCACTGAAAAGAAAGCTCGAGGCGCGCGCACGGGGCCGTCATGCAGCTGCCCAGATTGTGGGAAAAGCTTCCTTAGTCCGTACTACTTAAATATGCATTTACGAAACAGTGGTCAGAAGGAGGTGTGTCTAATTTGCGGATCAGTCCTAGCCAGAGGAAAAGAATTGAAGGAGCATCTATCATCTGTACATAATGAAATTGCATTACTATGCAACAAGTGCCCAATCTTATGCACAAATGAAATACAGTTAAAAAAACACGTAAAAAAAGCTCATAAGGGAGGCGCTTTGACGTGTACTGATTGTGGTAGGACGTTCCAAAGAAATGCTTCCTTCGAAAGTCATTCGCAAATGCATGCAGTCAGGACTTGTAGGGCATGCGGAGTACAGTTCACGAACAGAGGATGTTATAGGGAACATAGATCTCTATGTGAACCGAACGCAAAGCCTAATGCTCAAAACATGCCTCGAAATCGTCGTTCCAACATACGCGACCCCGCCACCTTCACCTGCGATCATTGTGGCAAAACATACAACTCTAGGCCCCAACTCAAAAATCACATACTCTGGATACATATGGACATTAGACCTCATCAATGTCAGTGGTGCGAAAAGAGGTTTTACACTCCCGCACGCTTGGCAGAACACACTGTTGTCCATACGCGCGTTAGAAAATTCGAATGTGACATTTGTGGCGCGAAACTCGTTTCCAAAATGGCCGCCGTTTACCATAGACGACGACATACTGGCGAACGACCTTATGAATGTGAAGATTGTGGAGATAAGTTTATTTCGGCGTCTCGCAGATCGGAACATGCTAAACGCAGGCATAACAAAGGCTATAGGTTACCGTGCATGGTATGCTCCGCAAATTTTGTTAGGAAACATGAATTGAAAAAGCATATGGAGAAGGCACATAGAGGGCCAGACAtcgaccgcacgacaAACACCACGGCGTCACACCTGAATTACGAGAACCGCCATTGCTGCTTACGGAACAAAGATGTTATCAACGTCGAACTGTTACCACTCATGTGCGGTTAA
- Protein Sequence
- MKEECLIPEGACVACASTALAAQEFRLFVRNSERLWRESITNLSILPTSAVPPVKTVCAFFKTSDLSVQTFKDYNTTDPKTILNRLRNRVAKKPTEKKARGARTGPSCSCPDCGKSFLSPYYLNMHLRNSGQKEVCLICGSVLARGKELKEHLSSVHNEIALLCNKCPILCTNEIQLKKHVKKAHKGGALTCTDCGRTFQRNASFESHSQMHAVRTCRACGVQFTNRGCYREHRSLCEPNAKPNAQNMPRNRRSNIRDPATFTCDHCGKTYNSRPQLKNHILWIHMDIRPHQCQWCEKRFYTPARLAEHTVVHTRVRKFECDICGAKLVSKMAAVYHRRRHTGERPYECEDCGDKFISASRRSEHAKRRHNKGYRLPCMMKEECLIPEGACVACASTALAAQEFRLFVRNSERLWRESITNLSILPTSAVPPVKTVCAFFKTSDLSVQTFKDYNTTDPKTILNRLRNRVAKKPTEKKARGARTGPSCSCPDCGKSFLSPYYLNMHLRNSGQKEVCLICGSVLARGKELKEHLSSVHNEIALLCNKCPILCTNEIQLKKHVKKAHKGGALTCTDCGRTFQRNASFESHSQMHAVRTCRACGVQFTNRGCYREHRSLCEPNAKPNAQNMPRNRRSNIRDPATFTCDHCGKTYNSRPQLKNHILWIHMDIRPHQCQWCEKRFYTPARLAEHTVVHTRVRKFECDICGAKLVSKMAAVYHRRRHTGERPYECEDCGDKFISASRRSEHAKRRHNKGYRLPCMMKEECLIPEGACVACASTALAAQEFRLFVRNSERLWRESITNLSILPTSAVPPVKTVCAFFKTSDLSVQTFKDYNTTDPKTILNRLRNRVAKKPTEKKARGARTGPSCSCPDCGKSFLSPYYLNMHLRNSGQKEVCLICGSVLARGKELKEHLSSVHNEIALLCNKCPILCTNEIQLKKHVKKAHKGGALTCTDCGRTFQRNASFESHSQMHAVRTCRACGVQFTNRGCYREHRSLCEPNAKPNAQNMPRNRRSNIRDPATFTCDHCGKTYNSRPQLKNHILWIHMDIRPHQCQWCEKRFYTPARLAEHTVVHTRVRKFECDICGAKLVSKMAAVYHRRRHTGERPYECEDCGDKFISASRRSEHAKRRHNKGYRLPCMVCSANFVRKHELKKHMEKAHRGPDIDRTTNTTASHLNYENRHCCLRNKDVINVELLPLMCG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -