Asph033026.1
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- -
- Assembly
- GCA_949699075.1
- Location
- OX453024.1:15759617-15760048[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-07 0.00024 22.0 0.0 17 42 1 26 1 29 0.92 2 2 0.45 6.3e+02 1.5 0.0 19 28 127 136 122 138 0.53
Sequence Information
- Coding Sequence
- atggGAGTAAGAGAAGCTTGCCGGTTTTATGGTGTGCCGAAAACAACGGTTCATGATCGTCTTTCGGGTAAAATTGCTGCTAATAAATTGCCAAAAGTAGGCCCAGACCCCGTTTTAGGTCGTGAGGGTGAGGAAAAATTAACGAAATGGATTCTAAACATGGCCAGGTGTGGATTTCCATTGAGTAAACAAGATCTATTAGAAAGTGTTTCAAAAATTATTCGTGACTCTGACATCAAAAACCCATTTAAGGATGGCAAGCCGGGAGACACCTGGTATCAGAAATTTTTAAAGCGTCATCCCGAAATAAGTATCCGAGAGCCAGAAGGCTTTAAACAATGCACGAGCAGTAGTAACAGAGACCCGCATACGGTCCTGGTTCAAAGAGCTGAGAGAATATATGGAGTTTATAGACGCTTTAGACATATTTGA
- Protein Sequence
- MGVREACRFYGVPKTTVHDRLSGKIAANKLPKVGPDPVLGREGEEKLTKWILNMARCGFPLSKQDLLESVSKIIRDSDIKNPFKDGKPGDTWYQKFLKRHPEISIREPEGFKQCTSSSNRDPHTVLVQRAERIYGVYRRFRHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -