Asph007020.1
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- -
- Assembly
- GCA_949699075.1
- Location
- OX453005.1:5518455-5520560[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-09 2.8e-06 28.2 0.1 1 41 24 64 24 68 0.94 2 2 3 4.2e+03 -1.2 0.2 16 32 485 501 482 501 0.88
Sequence Information
- Coding Sequence
- atggctCCTGTCTCTAACAAaggcaagaaaaaaaataaagatgacAAATATAACAAAAGGTTTGGTTACACTGAAGAAGCGCTAAGTAGTGCTCTTTCAGATATACGCAGTAATATCAGAAGTATCAGAGAAGCATGCCGACAATACGGGGTTCCAAGAACCACTGTACAGGACAGGCTTTCCGGTCGTGTTGCAGAAAGGAGAAAAGTTGGGCCAGACCCTATATTTGGTTTTGAAGGAGAAACAAAAATTGTTGATTGGATAATTGAGTTGGCAAAATCCGGAATTCCTATTAACAAATATGATTTTCTGGATACGGTGGCTGAGCTTGCAAAAGACGTTGGCATAGACCATCGCTTTCCAGGAGGTAAACTTGGTATCCGATGGTACCTCAGCTTTCTCAAACGCCATCCAAACATAAGCATTCGTGAGCCAGAAGCTATTAATAAGGCGCGAGAAGCTATCAAGGAAAGTACGATCCGGAAATGGTTTGCAGACTTACACGCATTCTTGGCTGAAAGAAATGTATTAGATATTTTAGATGATCCAAGTCGCATTCTAAACGCTGATGAAACTGGAATTTCACTGTCTCCTAAATCAGGGAAGGTTCTAGCACCTAAAGGCTACAAAAACGTGTACGTAGTTAAGAAAGGCAATGAGAAAGAGAACATGACAGTATTGGTGGTAATGACTGCGTCTGGGGAAATATGTCCGGCATTAGTGGTATTTCCTTATCTAAGACCATCTAAAGTGGTAGTCGACAACATGCCGCCTGACTGGATTTTAGGAAAATCAGAGAGTGGGTGGATGCgggtagatattttttttgagtACATGTCTAATGGGTTCAACGACTGGCTGAcgaaacaaaaagtaaaaaagccTGTACTGTTTTTAGTAGATGGGCATAAATCGCACATGTCCATGCCACTGAGTAAATTCTGCGAGAATAATGATATCATCCTGTACGCCTTGCCGCCGAACACCACTCACATCTTACAGCCAGCCGATGTGAGTGTATTTAAACCGCTTAAACAAGAATGGAAGCGCACCGTCAAAAATTGGCAGAGTCGATCAGAAAATCTGAACAAATGCATAACAAAAACGAACTTCTGCCAAGTTTTAAAAGAGACACTAAACATGGAGATGACTCAGACGATCAAGAATGGATTTCGTAAATGCGGCCTGTATCCATTTGACGTAGAACAGGTAGACTTTTCAAAATGCGTAAAAGACGCTCAGATACGAAATGCAATTGCTGCTCAAACGAATTCACAAAAACCTCTTAACGAGAGGCATTTTGAAATAGCTAGACAAGTGTTTTACCTGATGGAAGAGAATATAGCTAAGCTGGGGATAAATCCAAGCATAATCTTACAAGAACTTGATCGCACAAAGGAGTCATATTTACAAAGACGGCGATCTAAATCGAAGACACCACGAACTTCACAATCCACTTCAACCTCCCGACACTCAAAATCCTTTGAAGTTAACAAATCTTCAGATAAAATCAACAAGAGCCCCAGGCCAAAAACTTCAGGAAAAAATTCTGTTAAGAACACCGACAACAACTCTATTCAGATTCCAGATATTGGTTCTTTTGTATCTCTAGGCGATATCTCCATAACACCATTTAGTCCCATAAATTTATCAGAATTATGTCAAGTTAGTAACGATATTGTTATTCCTTATTTTATTGCTGTGGATGATGACAATCGTGCAGAATCTTCAATGAAAGATATACCAATAAACTCTGTGGAGTTGATTCAAGATGTTGCAATTGCAGAATCTGCAACAATTGTGATAGACCGGCAACTTAATAGCATATCTGTAGGGGTTGATGAAAACAAAGAACCATTAATTAAAGGCTGCACAAAAACTAAATCTGTTACATCTGAAGAAGTCATTTTAAAAGAACCTAAGAAACCATctccaaaaaatacaaattatattaCTGATAGCTCCACGATGCATGTAATCCAAATTGAAACAGTTGCTCAAATACACGAAGATCATGCTGCCAAAGAATCTGAAAAGTGCCATGATCAAATAGGAAACCGTTGGGTACTTCATTTTCAGTTACTGATCACGACCATAACCTCTTAA
- Protein Sequence
- MAPVSNKGKKKNKDDKYNKRFGYTEEALSSALSDIRSNIRSIREACRQYGVPRTTVQDRLSGRVAERRKVGPDPIFGFEGETKIVDWIIELAKSGIPINKYDFLDTVAELAKDVGIDHRFPGGKLGIRWYLSFLKRHPNISIREPEAINKAREAIKESTIRKWFADLHAFLAERNVLDILDDPSRILNADETGISLSPKSGKVLAPKGYKNVYVVKKGNEKENMTVLVVMTASGEICPALVVFPYLRPSKVVVDNMPPDWILGKSESGWMRVDIFFEYMSNGFNDWLTKQKVKKPVLFLVDGHKSHMSMPLSKFCENNDIILYALPPNTTHILQPADVSVFKPLKQEWKRTVKNWQSRSENLNKCITKTNFCQVLKETLNMEMTQTIKNGFRKCGLYPFDVEQVDFSKCVKDAQIRNAIAAQTNSQKPLNERHFEIARQVFYLMEENIAKLGINPSIILQELDRTKESYLQRRRSKSKTPRTSQSTSTSRHSKSFEVNKSSDKINKSPRPKTSGKNSVKNTDNNSIQIPDIGSFVSLGDISITPFSPINLSELCQVSNDIVIPYFIAVDDDNRAESSMKDIPINSVELIQDVAIAESATIVIDRQLNSISVGVDENKEPLIKGCTKTKSVTSEEVILKEPKKPSPKNTNYITDSSTMHVIQIETVAQIHEDHAAKESEKCHDQIGNRWVLHFQLLITTITS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147315;
- 90% Identity
- iTF_00171695;
- 80% Identity
- -