Asph040112.2
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- -
- Assembly
- GCA_949699075.1
- Location
- OX453032.1:14483491-14494677[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9e-06 0.013 16.5 0.0 7 35 46 73 42 78 0.88 2 3 0.0067 9.4 7.3 0.0 7 37 207 236 204 239 0.85 3 3 0.03 42 5.2 0.0 7 34 239 265 237 275 0.84
Sequence Information
- Coding Sequence
- ATGGACCACGGAATCCCCCTTAACATCCACGCAAGACCACGCCTAGTTGGAAGAAGACCGAACGAAATAGTGAACATCGAAACTGATGTTTTTCAAGAGAAATCTTATAAGCAGTATTCGTCACAACATCTTAGAGACGCTCTCATTGCTGTGAAAAAAGGCTACAGTGTGTACGCGGCCTCCAACAAGTACGGGGTTCCAAGAAAGACTTTAAGAAATTGGATGGAGAAATATGATATAAAAAGTCAGTTCTCGAAAGGGAGGCATTTCCCGATAGCAAACGTGCAGTGCCAGTACGACAGTCCGTCGGACACGGAGCCGGACCGGCCCGGGGCCGCCGCTCGGCCGCCGGACGACCACACGTACGACACACGGGACGAGCCGCCGGCGTTTATCATACGACACGTCAATAATGCACTAACGTTGCAGAGTCCGCCACACTTCCCCGAGGTCCGGCCTAAGATCATGACGATAGGTCCCGGATCGTCCGCGTCCGTCAACGTCATCCACGTGGGGGATAGACCACAGATGAATCTATCATCAGGCTTCTACCCGTCCTCCCAGCCGACAGAATACAGCATAAACAAGCGCATCCGTCGCAGCGAGGTAGTCCTGCGTCAGGCCGCTGACTGCGTCAGTCGAGGACTGACATTCCAGACTGTCTCCGAGCAGTTCAACATACCTATATCTACTATACGCGAGGTAGTCCTGCGTCAGGCCGCTGACTGCGTCAGTCGAGGACTGACATTCCAGACTGTCTCCGAGCAGTTCAACATACCTATATCTACTATACGATTCTTCATGGCGCGGAAAGGCATCCTGCCGCGGCGTAGACGAGGTCGTAGTACTCAGCCAAATCGTCCGTGCAGTAGTCCGGAGCCCCCCTTCCACATGCAGCACTTCAAGCTGCCCGACATGATCGCTATAAGGGCGGACGATGAAGACCCCCCCACACAATAA
- Protein Sequence
- MDHGIPLNIHARPRLVGRRPNEIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQFSKGRHFPIANVQCQYDSPSDTEPDRPGAAARPPDDHTYDTRDEPPAFIIRHVNNALTLQSPPHFPEVRPKIMTIGPGSSASVNVIHVGDRPQMNLSSGFYPSSQPTEYSINKRIRRSEVVLRQAADCVSRGLTFQTVSEQFNIPISTIREVVLRQAADCVSRGLTFQTVSEQFNIPISTIRFFMARKGILPRRRRGRSTQPNRPCSSPEPPFHMQHFKLPDMIAIRADDEDPPTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00450055; iTF_01230509;
- 90% Identity
- -
- 80% Identity
- -