Asph018181.1
Basic Information
- Insect
- Asteroscopus sphinx
- Gene Symbol
- -
- Assembly
- GCA_949699075.1
- Location
- OX453013.1:6100634-6108453[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.5e-08 6.2e-05 23.9 0.0 2 45 70 113 69 113 0.88 2 3 5.5e-10 7.7e-07 30.0 0.0 2 45 185 228 184 228 0.95 3 3 3.2e-10 4.5e-07 30.7 0.1 1 41 318 358 318 362 0.92
Sequence Information
- Coding Sequence
- ATGCGCCTCATTGGCCCAGATTGGGCCTCTCCCAGAATATTCACCAATAGGTCCACCGATGAAGAGTTATTGCTAGTGCCCAGGGGTGCACCGGCTCAACAACCTGCTGTTCTCTCCAGCCAGACATACCGTGAAGGACCAGCAGCTGTCAGGCACACTaGTTCGAAAAGAAAACCTGGAAAGCGAGTATCGAGAGCTATGTGGTCCGAAGATAACTTACGTGATGCCATGGAAGTATTAAAAAAGGGAAATATGACACAAAGAGCTGTGGCAAAATTGTATGGTATTCCTAGACGAACGCTGTGCAATCATATGAAAACAGGAAGTTTCGTCAAACGTTTAGGAAGAGGATCAACAATGAACGAAGTCCAAGAAGAACAACTCGtcaatagaataataaaactttcAAAATGTGGGATGAATGTGACAGAGACATTAATTCGTAGAGAAGCTTTTGATTTTTGTctagacaataatataaaacagaACTTTGACATCACTACTGGCCTCGCGGCATGGATAAACGTGCCTTTAAAGAAAGGCACGTGGTCAGAAGAAACTCTAAAAGGAGCCATGTTAGCAGTCTTAAGGGAGAAAATGCCACAGCGAACTGCAGCAAATCTTTATGGCATACCTAGACAAACTCTAGCTGATCACTTGTCAAAAGGAAATATGGTAAAACGCATGGGACGAAAATCAATAATGAATGAAGCACAGGAAGCGACTCTGGTtaacaaattattaaaactttCTTATAGTGGGATCAATGTAACTCCGCATGTAGTTTGTAAGCAAGCTTATCTTTTATGCGAAagattgaaaataaaacataattttaacgTGGAATCGAGACTTGCAGGCAAAAAATGGCTCAAGAGGTTTTTAAAACGGCATCCCGAAGTTTTGTGTCCAATTAAAAGGCGAATAGTGGGCGGTAGACGTGCTGCGTGGACAGAAGAAAGCTTGCGTGCAGCCATGGCGGCAGTCGAGATGGGTCAGATGCCTTTGCGCATTGCAGCAGAGTGCTACGGCATTCCCCGACGGACGCTATCTTATCACATGAAGACGGGAAGCGTTGTCAAACGCTTAGGAAGGGGCTCAGTAATGAATGAAAACCAAGAAATTGATTTCATTCACAGGGTACTAACACTTACCAACAGCGGGATACCTCTAACAGCAGAACTTATATGTAGACAAGCTTTTCTGTTctgtgaaaaatataatataaaacataattttaatatggACTTGGGCCTCGCCGGCAGGGACTGGCTTAGTGGGTTCGCAAAACGACATCCGGAGTTTTTTGTTGGAATGAAAGATTTATGA
- Protein Sequence
- MRLIGPDWASPRIFTNRSTDEELLLVPRGAPAQQPAVLSSQTYREGPAAVRHTSSKRKPGKRVSRAMWSEDNLRDAMEVLKKGNMTQRAVAKLYGIPRRTLCNHMKTGSFVKRLGRGSTMNEVQEEQLVNRIIKLSKCGMNVTETLIRREAFDFCLDNNIKQNFDITTGLAAWINVPLKKGTWSEETLKGAMLAVLREKMPQRTAANLYGIPRQTLADHLSKGNMVKRMGRKSIMNEAQEATLVNKLLKLSYSGINVTPHVVCKQAYLLCERLKIKHNFNVESRLAGKKWLKRFLKRHPEVLCPIKRRIVGGRRAAWTEESLRAAMAAVEMGQMPLRIAAECYGIPRRTLSYHMKTGSVVKRLGRGSVMNENQEIDFIHRVLTLTNSGIPLTAELICRQAFLFCEKYNIKHNFNMDLGLAGRDWLSGFAKRHPEFFVGMKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -