Basic Information

Gene Symbol
kn
Assembly
GCA_949699075.1
Location
OX453012.1:10152049-10178861[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.4e-45 1.9e-40 140.1 0.5 183 249 7 76 3 83 0.93
2 3 4.9e-32 1.1e-27 97.9 0.1 335 387 82 134 80 139 0.97
3 3 0.00079 18 4.8 1.5 421 472 144 203 135 259 0.54

Sequence Information

Coding Sequence
ATGGACCTGAATTTCTGGTTTTTCTTGAAGTTCTTCCTGAAATGCAACCAGAATTGTTTGAAGAATGCCGGCAACCCTCGAGACATGAGAAGGTTTCAGGTGGTAATATCAACTCAAGTGATGGTCGACGGTCCTTTACTCGCCATATCAGACAATATGTTTGTCCACAACAACAGCAAGCATGGCCGGAGGGCGAAGAGGCTAGACCCAAGCGAAGGTACAGATGCCGCGACAGACAATACTTCAGCGTTGAATGAGCCAACGATAGATTACGGATTTCAGAGGCTACAGAAACTTATACCGAGACATCCCGGGGACCCGGAAAAATTACCCAAGGAAATAATCTTAAAACGAGCGGCGGACTTAGCGGAGGCACTGTACTCAATGCCACGCAACAACCAACTAGGGCTAGGCGCGCCGCGGTCGCCGCCTTCCAGCATGCCTTTCAACTCGTATACAGGACAACTGGCCGTCAGCGTGCAGGATACAGCGGCCTCACAATGGACTGAAGTGTCTCTAGGACCGTACCACCCAGCCAACATGAATGGACACTTATCATCGGACCGTCACTATAACGCGTATAATACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAGAGCCTGGCCGACTGTCCGGTAAACATTCATACAAAATGCACCGGCAGCGATATGAAAGGGGCTCAGAATAAAGAGACCAAGCTGCGGAGCGCCTTTGCCGTTGTGAGGCAGAGTCCGCCGCGGGTTGCCAATGAGCATCATCAGAATTGGCACCACCTCGCCGTTCAGTGTtag
Protein Sequence
MDLNFWFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAATDNTSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPSSMPFNSYTGQLAVSVQDTAASQWTEVSLGPYHPANMNGHLSSDRHYNAYNTKDSGHYSERNGNSKSLADCPVNIHTKCTGSDMKGAQNKETKLRSAFAVVRQSPPRVANEHHQNWHHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00825370;
90% Identity
iTF_00155099;
80% Identity
-