Basic Information

Gene Symbol
gata1-a
Assembly
GCA_035079395.1
Location
JAVHKZ010000009.1:801571-814755[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.28 1.2e+03 -0.3 0.3 20 26 55 61 51 62 0.82
2 2 4e-15 1.7e-11 44.0 2.8 1 34 593 625 593 626 0.98

Sequence Information

Coding Sequence
ATGAATACAGCACAACTGAGTTTTTATCAAGTTTGTCGCCTTTGTTTGTTGGAGCTGAATGGCTCGTCGTTCGTACCGATATTTGATAACAAGGAAACGAATGTACCGCAGAAGATAAAGGCTTGTTTTAATATAAGCGTCGAAGAAACTGATCGATTACCGAACGTATTGTGTTCGGCATGCGCTCGAGATGTGGACCGATTCTATaaattcaaggaaaaagtaattaaaaacaATACCTTCCTCAAATCATTCGTACTCCAGCGGGATAAGAAGGCAGCGCAATTCTTGAATCGCGGAGATGATGCTGGCGAACAATCAGCCTCTCCGCCACCGCCACCCGTGAAAACGAAACGCGGTGGTCCTGCGTCGTCGGCGGCCGCGGCTAAAGGCAAACGGTCGCAGACGAAGAGCAAATCCAACACTTACCAAGAGACGCCCGAGAATCCGCTGAATAACTACGATAATTGCGATTTGTCCAACACATTCTTCGATAACAGTAATAAAGTGAAAGTGGAGATCATTCCGCAGGTAGACAATGACATGTACTCTGGTAATGGTGCCGTGTACAGCGAAATCAAGAATCATGTAGTCGAAATGTGGTCTTCGTCGCCGACTGAAGAATCGACAAGTGGTTTCCGTACGATCAAAGCGATTGAAGAGGCGAGAGCGGTCGCCTCGATCACCGATCCATCAGATTCCAAATCACCGGACTACACTACCAGTGTTATCAGACATTCGAGCGACGATTACGGAAATGGCAGTTCCAGCTACGACAAATACATTAGCGTTCACGTTAAAGAGGAAATTTGCAAGGACGACAACGGTGGAGAGGAGTATGATTCTGAAGATACAAAATCGGCTGCTTCATTGACTTTCCATGAGGAAGAAGACAAGTTGATCATTGATGAGGAGACGATGGAGGTCAGGCAGTACGTAGTGCCGCCCAATGAGGCTCTGAGTGAAGATGTGCGAACGTCTGACAATTGCATCTTACTTAGAACGTTGATTTCAACGTCAAACGCGAACCAGATTGTGCAGTCTACTCAACCTTTACGAAGCGGTCGAATCAGTGGAAATCCGAAGAAGCCGGCTACTTTTTCCCCGCAGATATTAGTGAGTGAAATGGAATCACCAACTTACCAACAGTCGTCTCCCCATGGTGGAGATAGTACACCTAACTCGGAGAAGAGTAGCACGAGACGGAAACAAAGATGTCCGATCAAAGCGGCTAATGATCCAACAATGGGAATTATTGTGGGTGACGAAAGCGACGAAGAAAATACAGAAGTATCTACTATATCCGAACAGCATCCGATCATCTATCAACAAGAGATCGTTAATATTAGTCCAGTCACCGTCACATGCTCTTCGAACGGACGCGAAGAAATTGTTGGCTATAATCAGACCCAGTTCCTGGACGAAGTTCTTTCAAGACATAGTTCGCCGGCCACTACTCCTCCAATGGTAGTGCCATCGCAAGCTGAGCGACTGCACAAAGCTTGCGACGTTCTGTTGCGAGCGGCCAGTAAAATTCAGGATCTACCGCCGGGTATCCAACAAGAAGAGGTAGTCGTCGAAGAGGAGGAAAGCATTACGGTATACACGAACAGTAGTCAAGAAGGACAAGGTGAACCGATTACAATTCGCCATAATCCTGTGCCTTTGtacgaaataaatttctcttctGTTAACGCCGCGCTGAACGAAGCCAACCGCCCGCAGAAGAAAGTAAAATCTCGCGAGAAAGTTCAGAATAACTCTACTCATAAAGAATGCAACAATTGCCACGCTGTACAAACTACAATTTGGAGACGAGATAGATTTGGTAATATCGTGTGCAACGCATGCGGTCTGTACTACAAATTACACAATTACGATCGTCCGTGCAGAATGCGAAGGGACGAGATACATAAAAGAAATCGTAAAAGAAACGCTAACGAAAATAAAGCCAAGAAAGTAAAACGTCCTTCGAACGGTAACTACGAATTGGACTCCTCGAGGGAGCAAGATAACTCTTCGGGTTCGTATACTCCGCCGGCCAACTACAACGAGAGCGCTGGCCACGTTTCTATGTCCGATCTCTATAACAATTCGCTGAATACGAGCGGCGGTAGTGGCATCAAGAAGCGCCGCAGGACGTCGGCGCCGGGTAATACGACCACGGTGACCGTAAAGGAAGAACAACTTGAAATCTACACGGAACAGGAGCACGAACTGCAGTCTCATATCGATAATGTCGAAGAAATTGGAGTTAACGGTACCGAAGTGGTGGAGGAGACTCTCGACAATCACGTCTACGAAGAGCAACAGCAGGAAAAACTGAACTCGATGTCAGCTTTCCAGCTCTCTACACACTTTGTGCCGATTAACGGTAAAGTTTATGAAGATGACTTCTCCGAAGAAAATTCTATGAGCGAAACGCCTTTGAATTTAGCAGCAGGTAGTCAAATCAGTAATTAA
Protein Sequence
MNTAQLSFYQVCRLCLLELNGSSFVPIFDNKETNVPQKIKACFNISVEETDRLPNVLCSACARDVDRFYKFKEKVIKNNTFLKSFVLQRDKKAAQFLNRGDDAGEQSASPPPPPVKTKRGGPASSAAAAKGKRSQTKSKSNTYQETPENPLNNYDNCDLSNTFFDNSNKVKVEIIPQVDNDMYSGNGAVYSEIKNHVVEMWSSSPTEESTSGFRTIKAIEEARAVASITDPSDSKSPDYTTSVIRHSSDDYGNGSSSYDKYISVHVKEEICKDDNGGEEYDSEDTKSAASLTFHEEEDKLIIDEETMEVRQYVVPPNEALSEDVRTSDNCILLRTLISTSNANQIVQSTQPLRSGRISGNPKKPATFSPQILVSEMESPTYQQSSPHGGDSTPNSEKSSTRRKQRCPIKAANDPTMGIIVGDESDEENTEVSTISEQHPIIYQQEIVNISPVTVTCSSNGREEIVGYNQTQFLDEVLSRHSSPATTPPMVVPSQAERLHKACDVLLRAASKIQDLPPGIQQEEVVVEEEESITVYTNSSQEGQGEPITIRHNPVPLYEINFSSVNAALNEANRPQKKVKSREKVQNNSTHKECNNCHAVQTTIWRRDRFGNIVCNACGLYYKLHNYDRPCRMRRDEIHKRNRKRNANENKAKKVKRPSNGNYELDSSREQDNSSGSYTPPANYNESAGHVSMSDLYNNSLNTSGGSGIKKRRRTSAPGNTTTVTVKEEQLEIYTEQEHELQSHIDNVEEIGVNGTEVVEETLDNHVYEEQQQEKLNSMSAFQLSTHFVPINGKVYEDDFSEENSMSETPLNLAAGSQISN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-