Basic Information

Gene Symbol
GATA1
Assembly
GCA_035079395.1
Location
JAVHKZ010000001.1:9247712-9260332[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.1 9e+03 -3.1 0.6 2 9 367 374 367 375 0.83
2 3 2.6e-16 1.1e-12 47.8 2.5 1 35 428 461 428 462 0.97
3 3 1.5e-18 6.1e-15 55.0 6.7 1 35 486 519 486 520 0.97

Sequence Information

Coding Sequence
ATGGACGAAGATTCCAAAACCAGTGCTGATAAAAATATTACGACAGTCATCAGGCCAGCGGGTAAAATAACAGTGAAACGTCTCTTACTGAGCGAGCATGGATCGTCCCGGATAGTGGACCGGAGGATCAACGAGAAGGAGGGTAACAGTTCAGCTCTAAAACTCGACCAAGAACTTCTCAAATCAAAAAGTACGGTACGTGAAATGTCGACTCCAATTCCGTGTGTGATTGATAATGTCGATGACTCGATAATCGATGACGTCAACACAAAGCCTTTGGTTACCGATATTCCCGAAGACCATGATACCGGACGCGAGGAAACAGATGAATCCAGAGTAACCCGCgtccaagaagaaaatgagcaaAGTTCATCAAACTTCCTAAACGTATTGGATCCGTACTTTCAACCCAAAATTGAAATGAACGACCACACTCATCACGGTAGTAATCAtatgaaacagaattttttcgcGCCACAAAGTCGAAGTATGGGTGCCGAGAGTCGAAGTCAAAGTTCAACAGATTTTTATGCGGGAAACGCGGATGTGAACAGATTCACTCAACCTCTGCCGCTCAACTTTCATCAAAAGTACCTCTTGAATCAACATTCCGCCGGGTCTAACAAGTACGGAAAGAATGCAGTTCATACCGGATGTTCTGTTCACAATCAGAATCGTCATCATAATGATCACGTGCACTACGGTGAGCCTACAAGTCAGATAAAATACGAACAAAGTGGCAGTGAAATGAAAGTCAACGCAGCAGGATCGTTCATATCGAGTACTTACGTCACGTTGGAGCCTATTCAAAATCAGCAAGACCAAGAACATGGAGCTACTGGATATGGGTACGGTAGGAATCCCGAGAGTGTCCAAAACGGCTACAATAATTTCTACTCGAAAGCCGTCTCTGTATCTCAAAGTGGAAGCGATGGGTCTGCGGTATACCACGTAAAAGGTCCCACAAATGATAAATTGTATGGTTCTGTCGTGGGGCAAAATCACTTCGACGAGGATCTGGCCAACGATCAGATGGCTATTTATGCGACGGTCAGTGGAAATTACGCAAGGAATGCGAATATGCCAAACGAATACTGGGCGAATTGTTCGACAAATAACAGTTCAGCTGATTACGATCAAGGTGCTGTTCTACAATTAACTACGGAACATCAAAATAGTAATATGGTCCCACAGTACGCCATTTACGCTGGTCATAATTCGGTCAATTGGCTCGACGATCAATACGATTCGAGCGGCATGCTCAACGTGGATATCAAGGAGTGCGTGAATTGCGCGGCTAGTGTTACGCCGTTGTGGAGACGAGATGGTACTGGTCATCATCTGTGTAACGCCTGTGGTCTATACAACAGAATAAACGGCGTCAACCGTCCTCCAGTCCGCTCCAGCCAAAAGAAAACATCGCAGCAAAATGGTAATAGAAGAACGGGAGTGGCATGTGCAAACTGTTCCACTACTACTACCACTTTAtggagaagaaataataatggCGAACCTGTGTGCAACGCCTGCGGTCTTTATTTTAAATTGCATAATGTGAATCGCCCTCTTACCATGAGGAAAGAAGGAATACAGACCAGAAAACGTAAAATCAAGAAGCTGGTGGAAGTTATGCAGGCAAATAATCCGTTGATAAAATCAGACAACAACAATTTGTCGTCAATATCGGAGGGAACGAAAATAGTTTTTCCTCAAGTTTATCCATCGTCGACGGAGTCCAGATCTGATGCGAGTACCTATGAGTCGATGATTCCTACTCCGGATCACCATCAATACATGGGTCAACCTTCTTTGGTCATCCAAGAAAATCATGCATTCTTGAACCGCCCTatttcaagtaTGCCGTCTCTGGAACCGATGATGACAAGCGTGATAACATCAACGTCTAATCTGTCGCGATAG
Protein Sequence
MDEDSKTSADKNITTVIRPAGKITVKRLLLSEHGSSRIVDRRINEKEGNSSALKLDQELLKSKSTVREMSTPIPCVIDNVDDSIIDDVNTKPLVTDIPEDHDTGREETDESRVTRVQEENEQSSSNFLNVLDPYFQPKIEMNDHTHHGSNHMKQNFFAPQSRSMGAESRSQSSTDFYAGNADVNRFTQPLPLNFHQKYLLNQHSAGSNKYGKNAVHTGCSVHNQNRHHNDHVHYGEPTSQIKYEQSGSEMKVNAAGSFISSTYVTLEPIQNQQDQEHGATGYGYGRNPESVQNGYNNFYSKAVSVSQSGSDGSAVYHVKGPTNDKLYGSVVGQNHFDEDLANDQMAIYATVSGNYARNANMPNEYWANCSTNNSSADYDQGAVLQLTTEHQNSNMVPQYAIYAGHNSVNWLDDQYDSSGMLNVDIKECVNCAASVTPLWRRDGTGHHLCNACGLYNRINGVNRPPVRSSQKKTSQQNGNRRTGVACANCSTTTTTLWRRNNNGEPVCNACGLYFKLHNVNRPLTMRKEGIQTRKRKIKKLVEVMQANNPLIKSDNNNLSSISEGTKIVFPQVYPSSTESRSDASTYESMIPTPDHHQYMGQPSLVIQENHAFLNRPISSMPSLEPMMTSVITSTSNLSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-