Ades003482.1
Basic Information
- Insect
- Aspidiotus destructor
- Gene Symbol
- -
- Assembly
- GCA_035079395.1
- Location
- JAVHKZ010000002.1:11071177-11074625[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.21 18 6.5 3.6 2 20 90 108 89 112 0.87 2 14 6.9 5.9e+02 1.7 0.4 1 20 120 139 120 141 0.91 3 14 0.015 1.3 10.1 2.9 1 22 287 308 287 311 0.90 4 14 0.074 6.3 7.9 2.0 2 23 314 335 313 335 0.94 5 14 0.0012 0.1 13.6 1.3 2 23 371 392 370 392 0.95 6 14 8.7e-05 0.0074 17.2 0.7 1 23 398 420 398 420 0.97 7 14 1.4e-06 0.00012 22.8 0.3 1 23 426 448 426 448 0.98 8 14 0.23 19 6.4 0.7 1 22 460 481 460 483 0.86 9 14 0.019 1.6 9.8 3.6 1 23 499 521 499 521 0.99 10 14 0.04 3.4 8.8 1.1 1 23 530 552 530 552 0.97 11 14 0.77 65 4.7 6.1 1 22 579 600 579 603 0.91 12 14 0.0062 0.52 11.3 3.3 2 23 679 700 678 700 0.95 13 14 0.0001 0.0084 17.0 2.3 3 23 711 731 709 732 0.95 14 14 0.00031 0.026 15.4 0.6 2 21 737 756 736 757 0.95
Sequence Information
- Coding Sequence
- atggacGAAGGAAGAAACGCTAATAGAGCAAAGGCCGTCGACCGTTACCGCAAATTATACCAAATTTCCTCGTTTCTTAATACAGGATTGACACCAGAACAAGTCCGACTGGTTCAAAAACTCATCGAAAAGGGAGAATCTGTCTCCTCCGAACCTCCTACTGAAATTATCCGTGGACGTGGACGCCCGCTAGGTGCCCGTACCATCGTTAAGTCAGTTAATCTTAAGAAAGTGGCTGAGATCGATCAGAAGCGAACGAATCATCTTCAGTGCAATGTGTGTAACATGGCTTTCAATCATCTTGTGAAATTCACGAACCATTGTCTGAAGCTGCACTTCAATAATGTTTTCTACCAGTATGATTGCGGTTTCTGTTACGAAGTGCACAGTTCTCGTGATAGCTTCATTGAACATATCCTTTTTCAAACGGCCGAAATTAATCCTAATCCTGTTGCCATAGTCTGTCCTCTCTGTGTTCTACCTCAGGGTACTAGTTCTTCggaagaagaattttgtaacCACTTACGTCAGCACGTCAATCTCAACGGAAGTCAATGGGTTTGTATGTTGCCGTCGTGTGAGTACCAGACTTACGATATCAAAGACTATACAAAGCACATTATCGCTACTCATACAAATCAGGTAGTTCCTAATTCTATCTGTCAACTATGCAAAAATCCGAAGTCGGAAGAGGAGTATCTCAAGGGACCTACTGTTGAACCTGAGCGTCTGAATTCATACGTAGAGGAGGTCGACGGAGCTGATGAAACTTGTCCGTTATGCTACTCCGTGTTGAAGGACTGTAACACTGTCTTGGTTTCCGGTAATGAGGTGATTTCTTTCGAGAAACCTAAGTATTATCGTTGCAGTATTTGCAATTCCGGTTTCAGTACTCAAACAAAGGTTACGAAACACGCTTGTCGTCAACTGCATACCACGTATTGCAAAGACTGTAATATACAGTTCACTTCGAAAAAGCGTTTGGTTTTCCATCTGCAGTCGCATATAGATCCTTCCATGACGTTGCGATGTGACGTGTGCATGTTGACATTTCCAGACGAAACAACATGCTATGACCATGTACGTTTCAGTCACGAATCGGAAACGCTTTGTTGCGACACGTGCGGGAAAACTTATATTACCAGGATCGGTCTGAGTATGCATCAAATGTATCATGACGACGTACGTAAGTTCAAATGTCCCGAATGCGATAAACGTTTCCTCAACCAGGCCACCCTGAAAGAGCATCGTGTCTCCCACCTTAACGTGAAGCCGTTTCAATGCGATATTTGCGGTAAATCCCTCTCTCGTGCTTCGCGCCTTCGTATTCATTTGAAAGTTCATTCTGCCCGCAACAgtaccaattttcagaaatgttTCACTTGCAAAGTATGCGGTTTCGTATCCTTCTCGAATGAACGTCTAATGGAGCATAATGTGAAGACGCACAATAGCAGCGAACAAGACTATAAGACTTCTATCCTTCATAAATTGTATCGCTGCGAATTTTGTGACAATTGTTACGAGATGCCCTCCCTACTACATTTGCATCGAGAAACTCATTCGCCGGATACAACTGAAAATCCATTTATTTGCGGCCTATGCAAcggttttttcaaaacttattcTAGGTTGGTTACTCATAAGCTATCGCACGGTATCAATACGGAAACGCATATTCTTCAAATTAGCTCAACCTTGGAGAGCACCGATAGCTTTATAATACCGCAGTACTTTTGTTGCAAATTTTGTGATAAATTGTACGAGCAGTACACGGCTTATAATATTCACATGAAACATTCGAAGCATTTCGTTCCGAAAGACAAAACGAACCAGAGAGAGCGGGTTGAAGAGGTACGTCAAATAAAACGACAATCGAAGTTGGTCAGTAAGACCATAAGCGCAACCGCCGAACCCAAGCGCAGTAATATTCGCAGACGCGAGTTGGACATCGCTGTCCAGAGTCTTACTAGAGACTTTATCGTACCGAAAGAACGTTTCACGCGAGGAAACAATCACAACCTTGAAAAGCTCATATGTTGcaaatgtggaaaaaatttcccatcagaAAAGATGCTACATATCCATGAGAACCGCCATAATCCTCGACGTAAGCGTAAAACTTTTGGCTGTGAAAATTGTCCTCGTTCTTTCAGTAATAAAATGGAGTTGAAGAAGCACGAGAGTTCGCATCACAGACCTCATATGACTTGCGAACATTGCGGTAAAGAATTCCGTTATCGTGGGTGGTACTTGTTGCATATGAAAAACGAGGTTTGCGCTAATAAAGACATGGGAGAAGAATCTGACTCCTTTAATGTGAGTGACGATATGCCACCGTCCCCATTCTCCGACATCCTCAACCGTATCTTGATGttctaa
- Protein Sequence
- MDEGRNANRAKAVDRYRKLYQISSFLNTGLTPEQVRLVQKLIEKGESVSSEPPTEIIRGRGRPLGARTIVKSVNLKKVAEIDQKRTNHLQCNVCNMAFNHLVKFTNHCLKLHFNNVFYQYDCGFCYEVHSSRDSFIEHILFQTAEINPNPVAIVCPLCVLPQGTSSSEEEFCNHLRQHVNLNGSQWVCMLPSCEYQTYDIKDYTKHIIATHTNQVVPNSICQLCKNPKSEEEYLKGPTVEPERLNSYVEEVDGADETCPLCYSVLKDCNTVLVSGNEVISFEKPKYYRCSICNSGFSTQTKVTKHACRQLHTTYCKDCNIQFTSKKRLVFHLQSHIDPSMTLRCDVCMLTFPDETTCYDHVRFSHESETLCCDTCGKTYITRIGLSMHQMYHDDVRKFKCPECDKRFLNQATLKEHRVSHLNVKPFQCDICGKSLSRASRLRIHLKVHSARNSTNFQKCFTCKVCGFVSFSNERLMEHNVKTHNSSEQDYKTSILHKLYRCEFCDNCYEMPSLLHLHRETHSPDTTENPFICGLCNGFFKTYSRLVTHKLSHGINTETHILQISSTLESTDSFIIPQYFCCKFCDKLYEQYTAYNIHMKHSKHFVPKDKTNQRERVEEVRQIKRQSKLVSKTISATAEPKRSNIRRRELDIAVQSLTRDFIVPKERFTRGNNHNLEKLICCKCGKNFPSEKMLHIHENRHNPRRKRKTFGCENCPRSFSNKMELKKHESSHHRPHMTCEHCGKEFRYRGWYLLHMKNEVCANKDMGEESDSFNVSDDMPPSPFSDILNRILMF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -