Ades023018.1
Basic Information
- Insect
- Aspidiotus destructor
- Gene Symbol
- -
- Assembly
- GCA_035079395.1
- Location
- JAVHKZ010000018.1:36814938-36817899[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0036 0.3 12.1 3.9 1 20 189 208 189 209 0.96 2 14 6.1e-05 0.0052 17.7 0.8 2 23 227 249 226 249 0.95 3 14 0.0023 0.19 12.7 3.8 1 23 263 286 263 286 0.94 4 14 0.74 63 4.8 3.2 1 23 345 368 345 368 0.92 5 14 0.00017 0.014 16.3 3.6 1 23 419 442 419 442 0.96 6 14 0.054 4.6 8.4 0.0 3 23 463 484 461 484 0.96 7 14 0.052 4.4 8.4 0.9 1 23 492 515 492 515 0.88 8 14 3 2.6e+02 2.9 2.0 1 23 541 563 541 563 0.95 9 14 6.3e-05 0.0053 17.6 2.8 1 23 569 592 569 592 0.95 10 14 0.007 0.6 11.2 2.4 1 23 598 620 598 620 0.94 11 14 0.00018 0.015 16.2 0.6 1 23 626 648 626 648 0.97 12 14 9.3e-05 0.0079 17.1 6.0 1 23 654 676 654 676 0.98 13 14 4.8e-05 0.004 18.0 3.2 1 23 682 705 682 705 0.98 14 14 0.0025 0.21 12.6 5.0 1 23 711 733 711 733 0.98
Sequence Information
- Coding Sequence
- ATGCCCTCGTCCGCCAGACCTTTTGTGGGAAAgtgCGATGCACATGCAAGGAGGAAACGTAATCCACTTCCTACTGACTGTGACGTCGACGAGAAATCTCCTAAAACGATCTCAGCGGAACAATCGACGGATGGAAAGGGTGTTTCAGCAGCGAACGTATCGTCTAGCCCTCCCGTAGTCAATCCGTCTTTCGCCAGCTTTATTGTCCTACCAAATCAAGCATTACCGCAAACAAATGTTTCCTCGAAACCACCGAGAACTATTCTTCCTCGTGCATCTAGCCCGTCAGATAAATTACCAATCGCACGCCATTCTAATGTACCGGTATTGCTCAATCCCGTCACCGCGATCGCCTTGAATCCAATTTCCACGGTCCCTCTGTTGATAAAATTACAACCTATAAATCCAGTCGCGGCGAAATCAACCCCTACTGAAAGAAAGACTGCGTCGAGTAAGAAGCAACGCTCTTCGAATTTGACCGCTTCAAAAGAGAACAAGGATTCAGATAAGCAAATAAAAGTTCCTCACGATAGCGAGTTCATCTTAGCTAGTGATACTGGCATGCATTCGTGTAATTATTGCGATTATCGTTGCAAGCGTAAATACGATATCAAAAGACACATTGTGTGTATGCATATGTCTACGAGTTCGAAGATggagttggaaattgaaaaattggtttGTTCTATTTGTGAacgaagttttcaaaataaagtcACCTTGCGGAAGCATGTGATGAAATCGCACTTCAAATCGGAACAGCGTCCGTCGACGGTTAACTATTGTTTTTGCTGCGATATTTGTCACGAAGGTTTCTATACTCAGAAACAACTTCTGGCTCATCACGATGTCATTCATTCTCTCGCAGCACCTATGACGTGGCTCAGTTTTCGTTCCGCCCGACGATACGCCACATCGTGTGAACAATGTAAGCGAAATTATAAGGAATCAAAATTCTCTGATCACTCGTGCACCCCTCTGAATGAAACGactcaagaaaaattgaaaagcgtCTTAAATTGTGATCCGAAGTACAAATGTGATTCGTGCTCGTTGTGTTTCTCATGGAAGTGGTTATATCGACAGCATCGAGAAAATATGCATCCAGGAGCTTCGATTTTAAATTGGGAGAACGTAGTTGAACAGGTGATACCGAATTATTGTAGTTCTTGTTTCGTGGTACTCGATGGAGAGGATTCTGTAAACCATCGATGCGTCTATACCGGTGGTGAAAAAGAAACTACTTTCAGAACGCATACGTGCAGCCTGTGTAACACGTCGTATGTGCGTAAAGCAGACTTTTATAGACATATGCGTCTGAAGCATCCTTTGGATTTCGATTGTAAGGAGGACCTTATTGTGAAACGGAAAACGACCTCCGTCAATTGTCCTTACTGCGAAGAGACTGGTGCCAATAAAGTTCTCatcttgaaacatgtcaagactGCGCATAATGTTGATTTGGGTACGCCATTCATCTGCGTTCCTTGTAATAAACTTTTTAAACGGAAATCAACCTTGGACACGCATAATCAGATTTATCACCCACGCGAGCAAAGTGAGGAGGAAGCTAGTCGCATTCTGAAAGAAtccgaaattttattgaatggCGATAAAGCTTTCCATTGCGGCATTTGTAATCGTAATATGTTCGATTCGATACGTTTTATGGCACATTATCGACTCCATAATATCGAGCGTAGATTTACGTGCGATTTATGCGGTAAGCAAACGCGGACGCAGCACCAGTTGAATTCCCATATCAAGTTTATTCATTTGAATATACGAAATTACGAATGCGATATTTGTGGCAAAAGTTTTCACGCCAAACAAGCGTGTGAAGAACATCGACGCATTCATACAGGTGAAAAACCATTTTCGTGCGAGATTTGTGGAAAAACCTTCGTCGCCATGAACGCTTTATTCACCCATCAGAAGTTCCATAACGACTTTTTCGCTCATAGTTGTCATTTGTGCccgaagaaattcaaaattcgtAGATCGCTCACAAATCATATTCGCACGCATACCGGAGAAAGACCTTTCAAATGTGACCTATGTTCGAAGACATTCAATAATTCTTCCCGGTTTTCCTATCATATGAGAGTTACGCATTCAGACAATAGACCGTTTACTTGTTCAAAGTGCGGTAGCTGTTTCAAGGCGAATAGATTTCTTACCAGACATCTGAAGTTGCACGACAAGCGAACGCATATACAGTTTCGTCGACGAAATAATCCCGCTTATTTTGAGACCCAGAAAACATCTACTGGAGAGAAAGGTTCAGACGGCCCTACTAAGGAAAGACACGCTGAATTATCGCCAGACGGCAGTGATCCTAGAAAATATGCTGCTACTGAGGACGTATCAGATGAGGAAATGGATGAAGAATTATTTGATGCAGATAAAGCTTGCAAAGAAGAAATTACTGTAAGCGAATTGGATTTCGCGTAA
- Protein Sequence
- MPSSARPFVGKCDAHARRKRNPLPTDCDVDEKSPKTISAEQSTDGKGVSAANVSSSPPVVNPSFASFIVLPNQALPQTNVSSKPPRTILPRASSPSDKLPIARHSNVPVLLNPVTAIALNPISTVPLLIKLQPINPVAAKSTPTERKTASSKKQRSSNLTASKENKDSDKQIKVPHDSEFILASDTGMHSCNYCDYRCKRKYDIKRHIVCMHMSTSSKMELEIEKLVCSICERSFQNKVTLRKHVMKSHFKSEQRPSTVNYCFCCDICHEGFYTQKQLLAHHDVIHSLAAPMTWLSFRSARRYATSCEQCKRNYKESKFSDHSCTPLNETTQEKLKSVLNCDPKYKCDSCSLCFSWKWLYRQHRENMHPGASILNWENVVEQVIPNYCSSCFVVLDGEDSVNHRCVYTGGEKETTFRTHTCSLCNTSYVRKADFYRHMRLKHPLDFDCKEDLIVKRKTTSVNCPYCEETGANKVLILKHVKTAHNVDLGTPFICVPCNKLFKRKSTLDTHNQIYHPREQSEEEASRILKESEILLNGDKAFHCGICNRNMFDSIRFMAHYRLHNIERRFTCDLCGKQTRTQHQLNSHIKFIHLNIRNYECDICGKSFHAKQACEEHRRIHTGEKPFSCEICGKTFVAMNALFTHQKFHNDFFAHSCHLCPKKFKIRRSLTNHIRTHTGERPFKCDLCSKTFNNSSRFSYHMRVTHSDNRPFTCSKCGSCFKANRFLTRHLKLHDKRTHIQFRRRNNPAYFETQKTSTGEKGSDGPTKERHAELSPDGSDPRKYAATEDVSDEEMDEELFDADKACKEEITVSELDFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -