Ades016665.1
Basic Information
- Insect
- Aspidiotus destructor
- Gene Symbol
- -
- Assembly
- GCA_035079395.1
- Location
- JAVHKZ010000012.1:11687257-11689306[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.049 4.1 8.5 0.0 1 19 88 106 88 108 0.79 2 12 6.9e-05 0.0058 17.5 1.4 2 23 131 153 130 153 0.96 3 12 0.02 1.7 9.8 1.6 1 23 159 182 159 182 0.92 4 12 0.29 24 6.1 4.0 2 23 189 211 188 211 0.95 5 12 0.9 76 4.5 0.0 2 23 291 313 290 313 0.91 6 12 1.2e-05 0.001 19.9 0.6 1 23 333 356 333 356 0.97 7 12 0.024 2 9.5 3.4 1 23 362 385 362 385 0.95 8 12 0.0087 0.74 10.9 0.3 1 23 391 414 391 414 0.93 9 12 5.8e-06 0.00049 20.9 0.2 2 23 462 484 461 484 0.96 10 12 0.0002 0.017 16.1 1.0 1 23 490 513 490 513 0.96 11 12 0.00019 0.016 16.1 2.7 1 22 519 540 519 542 0.89 12 12 0.0041 0.34 11.9 0.5 2 21 573 592 572 593 0.93
Sequence Information
- Coding Sequence
- ATGAGTGTTGAAGAAGACATTGCAATGGATACCACTGTCCAAGATGTCAACATCAAAGCAGAAAACCCCGGTAGCTCTCGAGAAGAAGATACAAATGAGTCAAACGACGATCACGAGATGAAGGAATGTAGCACTTTCTGTTCGTCGGACAACGCACAAAATTCCAAAAGTATGAAAGACGAACCCAAGAGCTCTCCTTCTGCTGATTATCCTGACAAGAAAGACTCCGACGGAGGAGGGGAGAAAACGAAAGGAAAAGTTTATGACTGTCCCCTTTGTGATCGCACATTCCGAGCTGAATATAGAGTAGAACTGCATATTGCATGTGAACActcgaaaaaaaagtcaaaaaaatcaGGAGAGAAGAAGACAAAGTGCTCAACAGCTTGGCCTTGTCATTtatgtgaaagaaaattcatggacaaaatgaatttaaatcGACATCTCGCTACCACCCACAGTGACAAGACACCATACTCGTGTCAGATGTGCGATCGAAAGTTCAAACTAGGCCAGTACCTACTCAAACATTTTACGTCAGCTCATTGTGATCTCGAACGCTGTTATTGTGAAAAATGTGATCATAAATTCAAAGGCGAAACGCTCATCTTCGACCACGTCCGTAAAGTTCATTGCAGAAGGGATCCAGATACATCAGAAGATGAAGCTGATGGTACTGATAAGGTCATTAGTAAACCAGTGACATCCAATGTGCCCTCTGTATCATCCAGTGTCTCCAAAGTCAAGAAGGAAGTTACCAGTGCACCGAAGAAGAGAGGCAGAAAAAAGAAGGTTCAACTCTCTTCTGGCCCTGTTGTTAAAGAATCGAGAAAAGATGTACTGAGTTCCTTTACCACTCAGACATATTGGAATTGCGCTGTTTGTGATCGCAATCTTGcgtcaagaaaaaaagttgaagaacatCTTTTAGCCGCTCATTTTGAAGATTGCCCAGAAACGCCAGATCTCGAAAATTACTACAACGTGCATACCAATTACATTTGCACTATATGCGATCTTCGTTTTGGGCAGAAGATGAATCTAAGTCGACACCTTCTTACCACTCATTGTAAAGAAACGCCGTTTCGTTGCGAAGTGTGCAAGCGGAAATTTAAGCTGCGACAGTATATTAAAAAACATTTTCTGTCCTTGCACTGCAACATCGTCGATTTCTTATGCGAAAAGTGTGACATCAAATTTGAGGATATCACATTACTAACAGAGCACGTTTCTAAAAACCACTGCCCTAAAAAGATCATAAAGCGTAAGAAACAGGATAATCAGAAACCAAAGCTGGCTAAGAAAGGTACAGATTCGGAGGGAGAGAAGAAGGTGAAACACAAAAAGCGTAAGACTTCTGGTGCTGGCCAGTTCATCGGATGGAGATGTGAGGAATGTGATAAAGAGTTCTCTTCAAAAATGAGCATGGAACGGCATATTATCACAGTCCACTCGGTGGAGACGCCTTTCAAATGTTCGGAATGCCCGAGAGCGTTCAAATTAGTGGAGTATCTTAGAAAGCATTATATATCGAAACATTGCACGTTTTCTACTCACTATTGCAATAAATGTGATACCACATTTGACTATAAATCGTCGCTCCTTCGACACGTGTATGATGAACACTGTCCAAATCAAAAGCGTTTGGGTCTGAAACGCCGCCGAGCGTCGGACAGTGATAATGATGAGATCGAATTTCCTGAGCAGCATCCCAGTGTGTGTCCGTCATGTAAGGAATCGTTTCCTCGTCATAAGTTACTGGTGAAACATGCGAAAAAGTGTGAGAAATACCTCTCTctttttaagaaagaaaatgaagaagctGTCTCTATGTTGAAACGGGAGTACGAATGCATTTTATGTCGGAAAATTTCTGACCACGCCGCTATTTTCAATACACATCTCGCTGAAGATCACAACGTACAATTCTTCTTCCATTTATGTTCTCGAAACCGTTGTCGAGAAGTTTTCGTATAG
- Protein Sequence
- MSVEEDIAMDTTVQDVNIKAENPGSSREEDTNESNDDHEMKECSTFCSSDNAQNSKSMKDEPKSSPSADYPDKKDSDGGGEKTKGKVYDCPLCDRTFRAEYRVELHIACEHSKKKSKKSGEKKTKCSTAWPCHLCERKFMDKMNLNRHLATTHSDKTPYSCQMCDRKFKLGQYLLKHFTSAHCDLERCYCEKCDHKFKGETLIFDHVRKVHCRRDPDTSEDEADGTDKVISKPVTSNVPSVSSSVSKVKKEVTSAPKKRGRKKKVQLSSGPVVKESRKDVLSSFTTQTYWNCAVCDRNLASRKKVEEHLLAAHFEDCPETPDLENYYNVHTNYICTICDLRFGQKMNLSRHLLTTHCKETPFRCEVCKRKFKLRQYIKKHFLSLHCNIVDFLCEKCDIKFEDITLLTEHVSKNHCPKKIIKRKKQDNQKPKLAKKGTDSEGEKKVKHKKRKTSGAGQFIGWRCEECDKEFSSKMSMERHIITVHSVETPFKCSECPRAFKLVEYLRKHYISKHCTFSTHYCNKCDTTFDYKSSLLRHVYDEHCPNQKRLGLKRRRASDSDNDEIEFPEQHPSVCPSCKESFPRHKLLVKHAKKCEKYLSLFKKENEEAVSMLKREYECILCRKISDHAAIFNTHLAEDHNVQFFFHLCSRNRCREVFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -