Basic Information

Insect: Aspidiotus destructor
Gene Symbol: -
Assembly: GCA_035079395.1
Location: JAVHKZ010000008.1:4832570-4837922[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.4e-06 0.00012 22.8 1.0 1 23 331 353 331 353 0.97

2 8 9.1e-06 0.00077 20.3 2.9 1 23 359 381 359 381 0.98

3 8 8.3e-05 0.007 17.2 0.9 3 21 389 407 387 407 0.95

4 8 4.3e-05 0.0037 18.1 1.3 3 23 425 446 423 446 0.97

5 8 3.7e-07 3.2e-05 24.6 4.5 1 23 460 482 460 482 0.98

6 8 9.7e-06 0.00082 20.2 4.7 3 23 615 636 613 636 0.96

7 8 1.8e-05 0.0015 19.4 3.0 1 23 679 702 679 702 0.96

8 8 6.7e-06 0.00057 20.7 0.2 1 23 712 734 712 734 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.4e-06	0.00012	22.8	1.0	1	23	331	353	331	353	0.97
2	8	9.1e-06	0.00077	20.3	2.9	1	23	359	381	359	381	0.98
3	8	8.3e-05	0.007	17.2	0.9	3	21	389	407	387	407	0.95
4	8	4.3e-05	0.0037	18.1	1.3	3	23	425	446	423	446	0.97
5	8	3.7e-07	3.2e-05	24.6	4.5	1	23	460	482	460	482	0.98
6	8	9.7e-06	0.00082	20.2	4.7	3	23	615	636	613	636	0.96
7	8	1.8e-05	0.0015	19.4	3.0	1	23	679	702	679	702	0.96
8	8	6.7e-06	0.00057	20.7	0.2	1	23	712	734	712	734	0.98

Sequence Information

Coding Sequence: ATGATCGATGTTTCGGCCGAGAAGTTCGACGTTATATGCCGACTATGTACGTCCTCGTTGGTCGACGGCGGAGCCCACAAAATTTTCGCGGACAGCGCCAATACGCCGGAATCGATATTCAAGAAAATTACGATATGTCTCCAATTAAAAATCGCAAAGGACGATCGACTGCCGCAGTCCGTGTGCACCAAGTGTGTAGCGAAATTAGATGAATTTTCAAGTTACCGAGAATCTTGTTCGCAAAATGAGCAAGTTTTATTGAATTGTTTATCTGATTCAGAAGCTAAATCAGCGTATCGAGGTGAAGGTGATTCACCTATCAAGCCCGAAGCTAGAGAAGATGCTACGAATGAGACGTCCAAATCTTCGCCCGTCgacaatgaaaaacttgagcGTCCAAAAACGGAAAAGGATTCGATGCAAAATCACTTATCAGATTTGGAGCTGTCGCCGGGCGAAAACGTGGGTATGAGTGAGGACGATGAAGAGGAAGagctagaagaagaaaaagAAAACGATGGTATGATTCAATCTCTAAATTTCCCTAAACCGACGTCCAGATCATCGTTACCAGAATTGGCTGAACCTTCTCCCGAAGATTACGTCCTTATGAAGGAAGAAACATTCAATTTAGATCCTGTTAAAGAATTGAACAGTCGCGGAGGTTCTAGTATTTTGGCGGACTACTTAATTGAATTCACCAACTCTAAAACCGGAGAGAACGAATCCAAGGATAAGGATATAATGGAATCGCAGCGATTGCGGCGCGAAGTCTTACCACCCATGTGGGACGTTTACGAAAAATCTatcactgaaaaagaaaacttcatTCCAGATGGCTCAAATGGCGAACGAGAAAGACTAGTAACCGTTACGCACCGACGATATATCATCAATAAAGGAGCGTTCCCGTGCTCGCTGTGCGGCGATTGTTTCGAATTCGATCAAGGCAAGAAACGCGACGATTTTACAGAAGAGAAATCTAAGCTCTACGACTGTCTAACCTGCGGTAAAGTGTTCCCCAGACGTAGTTCGTGGAAACGTCATCAGAGCACGCACGAAGACATAAAGCCTTACGTATGTCGACTGTGCAACAAAGGTTTCAACCGGAAGGAACATTTGAGTCGACATCTACTCTCTCACGGCAGTGTCCGGCCGTACGGATGTACCGTATGCAGCAAACAGTTCGTCCGAAAGGAGCATTTAACTCGACACCAAATGTGCAATCCTTCTTGCGCCGTACCCGTCGACAGTGTTATGCGCCCATTCGGCTGTGATGTATGCAACCAGGGCTTCGTCCGCAAGGAGCATTTGATTCGGCATCGTAAACGCGCCCACGATCTAGATCCACCCGAGGGTGAGACTGAACCTAAACCTTTTACTTGTTCCATCTGTACGAAAACATTTACCCGCCGGGAACATCTGAAACGACATCAATTGATTCATCAGCGTGAGTTTACTTCGCACACTCTAGAGAACATGACTATGACCACTGGGTCTCGTTTGTTTACAAACGCGAACAATAAGGATGATTCGTATTCTTCCGAAGTATCCATTTTCCCTGGGTCACAAATTCTTCCAGAAATTACCCTCTCCGAAGTGGCTAATGAATCGATGGAACGCGGAGATACCAATCATGTACAAGACACGAACGAGATCAATGATAATTCTATGATTACGGATTACAATGGTACTCCTCGTTTCGGGCTGATGAATGACGAAGATGTTGAAATGGATGATGATTCCGAGGAGCCGTTGCCGCCGATACCTGTTTTGGAGATGAACGCAAATGCTGCCAACGTGCAACCTACCATCGCTGACATAACCAAAAGTAGTACGTTTTGTAATGTCTGCTTCAAGAATTTCTCTCGTCGTAGTCACTTACTGCGCCACATGAAACGTATTCATAACATGCAGCTTCCTTCCTCAAACCGACGACGAACCCAACAAGTACAGCTGCTGAACAAGTCCGGCGATGAGAATGGTAATTCGCTAACTGACTCGAGAACAACCGCGCCTCAACCGGATCCCATTTACAAATGTAGATTGTGCGCAAAAATATTCTCACGTAAATCGCATTTAGAGCGACACGAAAAGAACATTCATCAATTGGACAAGGAAGCTAATCAACCTTACGAGTGCGTTACTTGCGGTGAAACCTTTATACAAAGTAAATTATTGGATAAGCATATGCAAGTACACGGTAATACTGTACCCGAAAACTATGTATGGATGTAA
Protein Sequence: MIDVSAEKFDVICRLCTSSLVDGGAHKIFADSANTPESIFKKITICLQLKIAKDDRLPQSVCTKCVAKLDEFSSYRESCSQNEQVLLNCLSDSEAKSAYRGEGDSPIKPEAREDATNETSKSSPVDNEKLERPKTEKDSMQNHLSDLELSPGENVGMSEDDEEEELEEEKENDGMIQSLNFPKPTSRSSLPELAEPSPEDYVLMKEETFNLDPVKELNSRGGSSILADYLIEFTNSKTGENESKDKDIMESQRLRREVLPPMWDVYEKSITEKENFIPDGSNGERERLVTVTHRRYIINKGAFPCSLCGDCFEFDQGKKRDDFTEEKSKLYDCLTCGKVFPRRSSWKRHQSTHEDIKPYVCRLCNKGFNRKEHLSRHLLSHGSVRPYGCTVCSKQFVRKEHLTRHQMCNPSCAVPVDSVMRPFGCDVCNQGFVRKEHLIRHRKRAHDLDPPEGETEPKPFTCSICTKTFTRREHLKRHQLIHQREFTSHTLENMTMTTGSRLFTNANNKDDSYSSEVSIFPGSQILPEITLSEVANESMERGDTNHVQDTNEINDNSMITDYNGTPRFGLMNDEDVEMDDDSEEPLPPIPVLEMNANAANVQPTIADITKSSTFCNVCFKNFSRRSHLLRHMKRIHNMQLPSSNRRRTQQVQLLNKSGDENGNSLTDSRTTAPQPDPIYKCRLCAKIFSRKSHLERHEKNIHQLDKEANQPYECVTCGETFIQSKLLDKHMQVHGNTVPENYVWM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -