Ades008645.1
Basic Information
- Insect
- Aspidiotus destructor
- Gene Symbol
- -
- Assembly
- GCA_035079395.1
- Location
- JAVHKZ010000003.1:30297764-30299239[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 8.9 7.5e+02 1.4 0.4 2 16 46 60 45 68 0.80 2 12 3.7e-05 0.0031 18.3 5.1 1 23 118 141 118 141 0.97 3 12 0.00079 0.067 14.1 0.1 2 23 159 179 158 179 0.96 4 12 1.2e-05 0.001 19.9 0.1 1 21 185 205 185 206 0.96 5 12 1e-06 8.6e-05 23.2 0.5 1 23 213 235 213 235 0.98 6 12 0.00076 0.064 14.2 0.7 1 23 245 268 245 268 0.96 7 12 0.00014 0.012 16.5 0.3 1 23 276 299 276 299 0.98 8 12 5.3e-06 0.00045 21.0 1.4 1 23 306 329 306 329 0.98 9 12 3.3e-05 0.0028 18.5 1.9 1 20 375 394 375 396 0.95 10 12 0.0021 0.18 12.8 0.1 1 23 403 426 403 426 0.95 11 12 1.3e-06 0.00011 22.9 0.2 1 23 431 453 431 453 0.98 12 12 0.033 2.8 9.1 0.9 5 21 462 478 459 479 0.94
Sequence Information
- Coding Sequence
- ATGTGTAGACACCGCAGGCAGCTGGATGAAAGTCTCCCTCCATCAGATGCTAGTCTTATGCAAACGGCTGAGGATACATTGGCGATTGATCTCAACAAATTTATCTCCGTACACAAGAATGGTATCAAATATATGCAATGCGACAAGTGTTCGTATATTTGCAGACCCGCGGTAGATCTCTTTCTCCGTCATTACGGAATTCATCATCTCCAGAATGACGATGTCAACCTCATTCGCGGAAACCTTCAAGACAAAAATGATTCCTGGCAGTTTACCTCCAACCATCGCGTACAACGCAGACGCACGAAGAAGTCCGTCCCCGAAACTGTTCGAGGAAACTCGGATATAATATACCAGTGTTATTTGTGCAAGAAAACGTTTTGCAAGAAGTATTTGTTGCGAATCCATTTGAGAAACGCTCACAATATAGATACTTACAAGACTGAGAAGAAAACCAAATCCCAAGCTTTTAGCGTTTGCCCGGTATGCGGGAAAAAACTCTCAGCCTCGGCGATGACTCGACATATGACCATTCATTCGGACAAGAAACCGTACACCTGTGATATGTGCGGAAAACAGTTCCGCGTTAAATGGTCCCTAAGAGAGCATATAATGGTTGAAATAGGCATGAAAGATTACGTGTGCGAGATCTGCGGCCGAAAATTTGTCATTCAAGCTTATCTGAACAAGCACATGCGATTCCACCAAATGGACGATGGTCAACTGGAGGGACATCAGTGCGAGATCTGCGGAAAGAAATTTCCTGAAATGTGGCGCGTCACAGATCATCAGCGAAAGGCGCACGCTCCGAAAAAACGAGCGATCTACGAGTGCGACATTTGCGGTAATAAATACACCCGCAAATGGTTGGTACGGTCTCACAAAAGAGTCGCGCACAAAGAGTTCTTCCAAACTTATCAGTGCGAGCACTGCGGGAAAACATTCGTCGAGAAATGGATGATCAAACTGCATTTAAGGACGTTGCATAACGTGTACATGCCGATAGAGGAGCAGTCCGAGGAACCGGAAACGAGAAAACGTAGTAGTCACGCGTTGCGAAGACTCCTGGAATACGAAAGATCGATCAAAAGTCAAATTGCCGGGGAAGACCTGAACAAACTGTTCCAGTGCGAATTATGTAAGAAAACTTTTTCGACGAagcaaaacatgaaaaatcattGGCACGCGGAACTCAATTTGCGCAAATACGCGTGCGAGTACTGCGGTAAACGGTACAACTGGTGGATGGGCTTGAAGGAGCATTTGATAGTCAGTCACGGCGAGAAAGAGTACGTGTGTGGAATCTGTGGCAAAGAATTTCCCACCAAATCTCGTTACCAGAATCACATGGCCGTTCATTCGGATACAAAGCCGTATACGTGTGATTGCGGCAGCTCGTTCAAATTGAGACGATACTTGACCAAGCACCAAAGACAGTATTGTAAAATGACGAAAGACTGCCGTATTGAAACCTAA
- Protein Sequence
- MCRHRRQLDESLPPSDASLMQTAEDTLAIDLNKFISVHKNGIKYMQCDKCSYICRPAVDLFLRHYGIHHLQNDDVNLIRGNLQDKNDSWQFTSNHRVQRRRTKKSVPETVRGNSDIIYQCYLCKKTFCKKYLLRIHLRNAHNIDTYKTEKKTKSQAFSVCPVCGKKLSASAMTRHMTIHSDKKPYTCDMCGKQFRVKWSLREHIMVEIGMKDYVCEICGRKFVIQAYLNKHMRFHQMDDGQLEGHQCEICGKKFPEMWRVTDHQRKAHAPKKRAIYECDICGNKYTRKWLVRSHKRVAHKEFFQTYQCEHCGKTFVEKWMIKLHLRTLHNVYMPIEEQSEEPETRKRSSHALRRLLEYERSIKSQIAGEDLNKLFQCELCKKTFSTKQNMKNHWHAELNLRKYACEYCGKRYNWWMGLKEHLIVSHGEKEYVCGICGKEFPTKSRYQNHMAVHSDTKPYTCDCGSSFKLRRYLTKHQRQYCKMTKDCRIET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -