Ades008644.1
Basic Information
- Insect
- Aspidiotus destructor
- Gene Symbol
- -
- Assembly
- GCA_035079395.1
- Location
- JAVHKZ010000003.1:30289850-30292129[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.00041 0.035 15.0 0.7 2 23 128 149 127 149 0.96 2 19 0.00013 0.011 16.6 3.2 2 23 153 174 152 174 0.97 3 19 0.0011 0.097 13.6 1.4 2 21 185 204 184 205 0.94 4 19 0.011 0.95 10.5 0.6 1 23 210 233 210 233 0.95 5 19 0.41 35 5.6 0.1 3 23 258 277 257 277 0.95 6 19 1.7e-06 0.00015 22.5 0.6 1 21 283 303 283 304 0.95 7 19 0.00014 0.012 16.5 1.0 1 23 311 333 311 333 0.98 8 19 0.00025 0.021 15.7 0.1 1 23 343 366 343 366 0.96 9 19 0.24 21 6.3 3.0 2 23 375 397 374 397 0.91 10 19 0.0034 0.29 12.2 0.5 1 23 405 428 405 428 0.95 11 19 0.024 2 9.5 0.1 3 23 461 482 459 482 0.93 12 19 0.23 19 6.4 0.1 1 21 514 534 514 535 0.90 13 19 9.4e-05 0.008 17.1 0.7 1 23 544 566 544 566 0.96 14 19 0.00011 0.0093 16.8 0.2 1 20 575 594 575 596 0.95 15 19 0.13 11 7.1 2.4 2 23 599 621 598 621 0.92 16 19 0.00087 0.074 14.0 2.4 1 20 646 665 646 666 0.96 17 19 0.00023 0.02 15.8 4.9 1 23 674 697 674 697 0.96 18 19 0.00031 0.027 15.4 1.1 1 23 702 724 702 724 0.96 19 19 0.73 62 4.8 1.8 5 21 733 749 730 750 0.92
Sequence Information
- Coding Sequence
- ATGAGCTCGTCACTTGAGGTCGTTAAGAAAGCGCCACCCACAGATGAAGAGGATCCTATTAAAAGTGACCCTGTTGTAGATAAATGTGCTTTCTGCAATGTTGACGTGGAAAATGGAATCAGTTATGACGGAAGTCTGCTATGTTTGAACTGTAGCGAAGAATATCAGTACGAAAATGGAAAGGAGGGTGAATCGAGTCCGACGATCTCTAAGCACGAACTCGAACTGTTCGAGGGAACGACGTACTTTCGGGACACGCGACTCGAAAAaagaattgttgaaaaagaagacgtCGTAGATACGTATCTCAACAATCCTGTTAAAATCGAACGAGTCGATCATGTAACGCTGTCTGGGAACAAAGGTTCAGAAAGTGAATTGCGATGCGCTTCTTGTCTGAAAACTTTCCAACGTCGAGGTAGTTTGATTGCGCATCTTCGAAAACACGATAAATTGACCTGCAAAATATGTAATAGCGTATTTAAATCAGCGGCTCATCTAAAAACGCATAAAAAGCGTCACGTACGAAAATTAATCAACAATACGTTATTGTACTGCGAGAATTGTAAAAAGTACTTCAAAACCAGAAAAGGGTTGGAATACCATCAACGGAATATTTGTATCCAGCATAAATGTTTCCTGTGCGACGAAACTTTCCCCACAGCTGCCGTGATGCAAGAACACGTCAAATTGAAGCACGATGTCCAAAAGAAACCTTTTGAGGGCGATATAAGTACTTGGAAGGACGATAACGAAACTGTTATGAGCGCTTGTCCCGTGTGCAGtaaaatcgtcacaaaggctagGATGGCTCGCCATATGCTTCTGCATGTTGAGGATAAACCTTACATTTGCGATTTGTGTGGAAAGCGATTCAAACGTAAACATTCGCTCCAGGATCATATTATGATTGAGATGGGTATGAAAAATTACGTCTGTGATGTGTGCGGaatgaaatttctgaaacaGGGCTATCTCAATAAACATCAACGATATCATAAGCTGAATAACGGCGAGTTTCAAGGTTTTCGATGCGAAGTATGTGGAAAACGATTCCCGGAGAAGTGGCGTCTAGGTGTACATCAACGAGCGGTCCATAAAGGTGGTAAATTTGCCACGTGTAAATGCGATGTTTGTGACCAACAATTTGCGGAACGTTGGATGGTGCGGAAACATAAACACCTCGAGCATAACGGCGAAGAATTCCATGAATATGTGTGTGATATGTGCGGCAagaaattcttggaaaaatggATGATGCGGTCCCATCAACGAGCAACACATCGCAGTTTCGGCAAGAAACAGTATTGCGATCATTGCGGCCGCGGCGATCACGTAAGTACGGAGTGTGCGCATCGGCACGTTCTGCAGGAGGTGAATTGTCAGTTGTGCGACGACCAGTTCACGTCGAATTATTTACTGAAAGAGCACGTGAACGCTGTTCATACTTTTTATGGCTTGAATGATTTGGGGCTGGCGGACATTGTCGACGTGGAGTTGTTGAACGATCCGCTGGTCGAAGAGAAAAGTAGTGTTCTTTATACCTGCCCCGGTTGTGGCGATCAATTTTTGAGTAAGCAAGCCTTGAAAGAGCACGAAATGCGAACTCAGTGCTGTGCGGATACGAAGTACGAATGTATAGATtgcgaaaaagttttcacttcgAAGTTTAGCTTGAGTAATCATTTGATGAGCCATAAAAAAGCGTTGACCCCGCTCAATTACAAGTGCGAGCTTTGCGATAAAGATTTTTTCACGTCGGAAGCGTTGGAAAACCATCAATCGTTGGAAAAGGTTTGTTTGTTATGCGACAAGGTGTATCCGTGCAACGATCACTTGAAGAATCACGTTTTCTCGGAACATAATAACGACGAAGATTTTGCTAGCACTTCGAACAACGTAGACTCGTCGGTTGGCGACCCGGAGGATAAACCGTTCGAGTGTAAGTTGTGTGGCAAGAAATTCCATCGTAAGCAAGCGATGAAGAATCACCTGTACGCTGAAATGAATTTACGTCGATACGTGTGCGAATTCTGCGATAAAAGTTACAATTATTATTCGCATTTGAAGGAACATCTGATCTCCTGTCACGCCGACAAAGAATACACTTGCGGTTATTGCGGAAAAGAATTTCCATCGAGGAAGCGTTTTCGCGATCACGTCACTTTACACTCGGAAGATAAACCATTCCAATGTGTCTGCGGATTGTCTTTCAAGCTGAACCGTTATTTGAGTAAACATAAGAAACATTGTAAATTATCGAAAGATTCCTTATTTTGA
- Protein Sequence
- MSSSLEVVKKAPPTDEEDPIKSDPVVDKCAFCNVDVENGISYDGSLLCLNCSEEYQYENGKEGESSPTISKHELELFEGTTYFRDTRLEKRIVEKEDVVDTYLNNPVKIERVDHVTLSGNKGSESELRCASCLKTFQRRGSLIAHLRKHDKLTCKICNSVFKSAAHLKTHKKRHVRKLINNTLLYCENCKKYFKTRKGLEYHQRNICIQHKCFLCDETFPTAAVMQEHVKLKHDVQKKPFEGDISTWKDDNETVMSACPVCSKIVTKARMARHMLLHVEDKPYICDLCGKRFKRKHSLQDHIMIEMGMKNYVCDVCGMKFLKQGYLNKHQRYHKLNNGEFQGFRCEVCGKRFPEKWRLGVHQRAVHKGGKFATCKCDVCDQQFAERWMVRKHKHLEHNGEEFHEYVCDMCGKKFLEKWMMRSHQRATHRSFGKKQYCDHCGRGDHVSTECAHRHVLQEVNCQLCDDQFTSNYLLKEHVNAVHTFYGLNDLGLADIVDVELLNDPLVEEKSSVLYTCPGCGDQFLSKQALKEHEMRTQCCADTKYECIDCEKVFTSKFSLSNHLMSHKKALTPLNYKCELCDKDFFTSEALENHQSLEKVCLLCDKVYPCNDHLKNHVFSEHNNDEDFASTSNNVDSSVGDPEDKPFECKLCGKKFHRKQAMKNHLYAEMNLRRYVCEFCDKSYNYYSHLKEHLISCHADKEYTCGYCGKEFPSRKRFRDHVTLHSEDKPFQCVCGLSFKLNRYLSKHKKHCKLSKDSLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -